SWU07-209, SWU07-209 (genetic_marker) Gossypium spp.

Marker Overview
NameSWU07-209
Genbank IDBE055596
TypeSSR
SpeciesGossypium spp.
Repeat Motif(TA)3
Primer 1SWU07-209_F: GGTCCTATCCAAGATTTGCG
Primer 2SWU07-209_R: CCCTGAGTGTTTGTTTCCCT
Product Length184
Publication[view all]
Commentmarker sequence confirmed
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankBE055596
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A09chromosomeA09:2795324..2795507 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018210.1chromosomeCM018210.1:2432044..2432227 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr09_CRI-A2_v1.0.a1chromosomeChr09_CRI-A2_v1.0.a1:3491981..3492164 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
CM016622.1chromosomeCM016622.1:96162684..96162866 +Gossypium australe (G2) genome CRI_v1.1n/a
At_chr6chromosomeAt_chr6:6742281..6742464 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A09chromosomeA09:2425170..2425353 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A09chromosomeGhir_A09:2564806..2564989 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A09chromosomeA09:2531105..2531288 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A09chromosomeA09:2614766..2614949 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A09chromosomeA09:2761021..2761204 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_A09chromosomeGbar_A09:2477063..2477246 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A09chromosomeA09:2632338..2632521 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017618.1chromosomeCM017618.1:2538828..2539011 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017644.1chromosomeCM017644.1:2486603..2486786 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017696.1chromosomeCM017696.1:2716710..2716893 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A09chromosomeA09:2675529..2675712 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr09chromosomeChr09:2563476..2563659 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr09chromosomeChr09:2459580..2459763 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
B_09chromosomeB_09:2595580..2595762 -Gossypium anomalum (B1) genome NSF_v1n/a
E09chromosomeE09:79803344..79803529 +Gossypium stocksii (E1) genome NSF_v1n/a
F09chromosomeF09:2005586..2005768 -Gossypium longicalyx (F1) genome NSF_v1n/a
Sequence
>SWU07-209 ID=SWU07-209; Name=SWU07-209; organism=Gossypium spp.; type=genetic_marker; length=184bp
GGTCCTATCCAAGATTTGCGTGACTACAACTGGTTCAGACGCCGTACTTA
CTGGAACCGGTATTAGATTAATTTGCTTTTTTCTTTATCAATGGGATCAC
CTTCTTGGGGGGAATCACACGAAAAAAAGACATTTTGGCACTTTTATATA
CAAGCGAAGTTTCCAGGGAAACAAACACTCAGGG