PGML4342, PGML4342 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML4342
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TTTA)4,(TTA)5
Primer 1PGML4342_F: CTGGCTCTGAATCATCAATGT
Primer 2PGML4342_R: TTGTAGCCAGAACAACGACG
Product Length143
PolymorphismP_ PGML4342
Publication[view all]
CommentBAC_ID=FITC114788.b1
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D5_05chromosomeD5_05:4337565..4337707 +
Ghir_D05chromosomeGhir_D05:4841258..4841388 +
Ghir_A05chromosomeGhir_A05:5519012..5519142 +
Gbar_A05chromosomeGbar_A05:5154598..5154728 +
Chr05chromosomeChr05:4359251..4359393 +
chr09chromosomechr09:4224922..4225174 +
Chr_09chromosomeChr_09:4573142..4573269 +
Chr09chromosomeChr09:4238596..4238732 +
E05chromosomeE05:5741921..5742078 +
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1GX1135 x GX100-2, RIL (2015)AD_ch19_Dt.05N/A86.3PGML4342View
2GX1135 x GX100-2, RIL (2016)AD_ch19_Dt.05N/A86.3PGML4342View
3GX1135 x VGX100-2, RIL (2016)AD_ch19_Dt.05N/A10.9PGML4342View
Sequence
>PGML4342 ID=PGML4342; Name=PGML4342; organism=Gossypium raimondii; type=genetic_marker; length=143bp
CTGGCTCTGAATCATCAATGTAAAAGGTACAAGTTTTTCATTTTTTTTTC
TTGATTTTTACCGAGCAACATACATTCATTATCCTTTATTTATTTATTTT
TATTATTATTATTATCAATTATTCGTCGTTGTTCTGGCTACAA