PGML0583, PGML0583 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0583
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TTTTA)3
Primer 1PGML0583_F: GGGATGCAGAACAGTAGCTGA
Primer 2PGML0583_R: TGCTTTCCTCGATCTTTACCA
Product Length357
Publication[view all]
CommentBAC_ID=FITB10740.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D06chromosomeD06:21808351..21808705 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018220.1chromosomeCM018220.1:20506222..20506574 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_06chromosomeD5_06:20742147..20742503 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_06chromosomeD10_06:41297853..41298205 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr10chromosomeDt_chr10:28979223..28979577 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D06chromosomeD06:20873226..20873580 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D06chromosomeGhir_D06:21413767..21414121 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D06chromosomeD06:20875232..20875586 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D06chromosomeD06:21363802..21364156 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D06chromosomeD06:20923014..20923367 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D06chromosomeGbar_D06:20681303..20681655 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D06chromosomeD06:20407956..20408308 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017628.1chromosomeCM017628.1:21212518..21212870 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017654.1chromosomeCM017654.1:20825774..20826127 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017706.1chromosomeCM017706.1:20676524..20676877 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D06chromosomeD06:21644117..21644471 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr06chromosomeChr06:20535710..20536066 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr10chromosomeChr10:20956832..20957182 -Gossypium thurberi (D1-5) genome CRI_v1n/a
chr10chromosomechr10:17584423..17584745 -Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_10chromosomeChr_10:16106137..16106489 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr10chromosomeChr10:21884871..21885222 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr10chromosomeChr10:12577428..12577779 -Gossypium gossypioides (D6) genome ISU_v1n/a
Chr10chromosomeChr10:15240460..15240809 -Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0583 ID=PGML0583; Name=PGML0583; organism=Gossypium raimondii; type=genetic_marker; length=357bp
GGGATGCAGAACAGTAGCTGAATATAAGAGAGAATTTGATCGGCTTAGTA
AGTATGGTAGAGAATTAATTCTGAAAGAAGCTGCTATATGTGCTCGTTTT
AAGGAAGGCTTGAATGAAGAAATCTAGTTTCTTGTCGGGGCACTTGAGTT
AAAAGAGTTTTTTTATTTTATTTTAGTTGATAAAGCTAAGAAGATGGAAG
ACTTTAGCAAAGGAAAGAAAAAGATAGATTTTGAAGTTCGAGACTCGAGT
AGAAGACAATTGGGAAAATCTTTCTCTTCTCCTTCAAAAAAAGTAAAAGA
ATCACGCAGTCATATGTAAGCTCCGTTTGGATTTTCTGGTAAAGATCGAG
GAAAGCA