PGML0574, PGML0574 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0574
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TA)8
Primer 1PGML0574_F: CATTAATGCATAACGAGTCCAAA
Primer 2PGML0574_R: GTTGCTAGATCGGTCCCTCA
Product Length247
Publication[view all]
CommentBAC_ID=FITB10659.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018216.1chromosomeCM018216.1:5025388..5025653 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_10chromosomeD5_10:61400849..61401090 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D5_07chromosomeD5_07:49311693..49311933 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D5_03chromosomeD5_03:58820693..58820937 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D5_03chromosomeD5_03:58805657..58805896 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
scaffold1485.1supercontigscaffold1485.1:437214..437455 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D02chromosomeD02:5527468..5527709 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D02chromosomeGhir_D02:5424299..5424538 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D02chromosomeD02:5197943..5198184 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D02chromosomeD02:5443747..5443988 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D02chromosomeD02:5375675..5375916 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D02chromosomeGbar_D02:5542475..5542740 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D02chromosomeD02:5113233..5113498 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017624.1chromosomeCM017624.1:5758178..5758443 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017650.1chromosomeCM017650.1:6068464..6068729 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017702.1chromosomeCM017702.1:5436233..5436498 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D02chromosomeD02:5555436..5555677 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:2161993..2162233 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr03chromosomeChr03:4688253..4688498 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr03chromosomeChr03:4703298..4703537 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr01chromosomeChr01:53741312..53741552 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr01chromosomeChr01:37720479..37720717 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr03chromosomeChr03:35907122..35907363 -Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr01chromosomeChr01:8353452..8353690 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Sequence
>PGML0574 ID=PGML0574; Name=PGML0574; organism=Gossypium raimondii; type=genetic_marker; length=247bp
CATTAATGCATAACGAGTCCAAAATATAAAATACAGACTAAAATAATAAT
TTATTACATTTTAAACTATCATAATAATAAATTTTAAACATTATTAAAAT
TAAATGCTATAAGTAATATTAAAATCTATGATATATGAAAATAGGATTAG
GTATATATATATATATAAAAATATTGTTGAAATAAATAAAAAATGAATTT
GTACTAAATTGAAATTTATTCCAAAATTGAGGGACCGATCTAGCAAC