PGML0523, PGML0523 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0523
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(ACA)7
Primer 1PGML0523_F: CTGTTGTCCAATTTCTTTGGAA
Primer 2PGML0523_R: TGGGTCTCGCTATTGGATTC
Product Length168
Publication[view all]
CommentBAC_ID=FITB403.x2 1
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D12chromosomeD12:52772345..52772521 -
A12chromosomeA12:90627937..90628090 -
CM018226.1chromosomeCM018226.1:49461459..49461635 -
CM018213.1chromosomeCM018213.1:87545111..87545264 -
D5_12chromosomeD5_12:10207309..10207476 +
KI_12chromosomeKI_12:7729680..7729841 +
D10_12chromosomeD10_12:44436405..44436572 -
CM016625.1chromosomeCM016625.1:16478503..16478667 +
scaffold2090.1supercontigscaffold2090.1:53946..54099 -
Dt_chr8chromosomeDt_chr8:45838863..45839039 -
D12chromosomeD12:49000808..49000984 -
A12chromosomeA12:76321788..76321941 -
Ghir_D12chromosomeGhir_D12:51856303..51856479 -
Ghir_A12chromosomeGhir_A12:95075077..95075230 -
D12chromosomeD12:50815768..50815944 -
A12chromosomeA12:95615097..95615250 -
D12chromosomeD12:51975864..51976040 -
A12chromosomeA12:93188101..93188254 -
D12chromosomeD12:49756915..49757091 -
A12chromosomeA12:90323586..90323739 -
Gbar_D12chromosomeGbar_D12:48729791..48729967 -
Gbar_A12chromosomeGbar_A12:90164166..90164319 -
D12chromosomeD12:49943973..49944149 -
A12chromosomeA12:89540715..89540868 -
CM017621.1chromosomeCM017621.1:89997250..89997403 +
CM017634.1chromosomeCM017634.1:49824084..49824260 -
CM017660.1chromosomeCM017660.1:52637285..52637455 -
CM017647.1chromosomeCM017647.1:94229987..94230140 -
CM017712.1chromosomeCM017712.1:50422626..50422802 -
CM017712.1chromosomeCM017712.1:50466448..50466619 -
CM017699.1chromosomeCM017699.1:89813880..89814033 -
D12chromosomeD12:51933721..51933897 -
A12chromosomeA12:96645876..96646029 -
Chr12chromosomeChr12:97328121..97328274 -
Chr12chromosomeChr12:47570119..47570286 -
B_12chromosomeB_12:76236376..76236540 -
Chr08chromosomeChr08:47754961..47755128 -
chr08chromosomechr08:37103547..37103714 -
Chr_08chromosomeChr_08:34610401..34610568 -
Chr08chromosomeChr08:49102483..49102650 -
Chr08chromosomeChr08:33767110..33767277 -
Chr08chromosomeChr08:26586343..26586495 -
Chr08chromosomeChr08:32703635..32703802 -
E12chromosomeE12:100801340..100801507 -
F12chromosomeF12:80310566..80310730 -
Chr12chromosomeChr12:4818434..4818598 +
Sequence
>PGML0523 ID=PGML0523; Name=PGML0523; organism=Gossypium raimondii; type=genetic_marker; length=168bp
CTGTTGTCCAATTTCTTTGGAACAATAACAAGCAAGTTTATGCCTTGTTA
ATTAACTTGAATAAAATCACCATCAACAACAACAACAACCACAACAGCAT
GGTTCCACCTGGAAAATTCTGCTGATAAAAGAATTATGTGATTGACCTGA
ATCCAATAGCGAGACCCA