PGML0499, PGML0499 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0499
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(AAAAT)4
Primer 1PGML0499_F: TGTGATCATGTTAATTTGGATTGA
Primer 2PGML0499_R: CCAACTTGCCACGTCTGATT
Product Length99
Publication[view all]
CommentBAC_ID=FITB4147.x2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D10chromosomeD10:22520929..22521027 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018224.1chromosomeCM018224.1:21246112..21246210 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_10chromosomeD5_10:41243112..41243210 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_10chromosomeD10_10:43510347..43510444 -Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr11chromosomeDt_chr11:20353718..20353816 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D10chromosomeD10:21143643..21143741 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D10chromosomeGhir_D10:21443362..21443460 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
Ghir_A10chromosomeGhir_A10:78204915..78205003 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D10chromosomeD10:20862471..20862569 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D10chromosomeD10:21605915..21606013 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D10chromosomeD10:21568497..21568595 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D10chromosomeGbar_D10:21069929..21070027 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D10chromosomeD10:21436034..21436132 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017632.1chromosomeCM017632.1:21142266..21142364 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017658.1chromosomeCM017658.1:21550315..21550413 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017710.1chromosomeCM017710.1:21542251..21542349 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D10chromosomeD10:21707587..21707685 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:20933137..20933235 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
B_10chromosomeB_10:71135434..71135532 -Gossypium anomalum (B1) genome NSF_v1n/a
Chr11chromosomeChr11:21044670..21044768 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr11chromosomeChr11:21254896..21254993 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
E10chromosomeE10:76954302..76954400 -Gossypium stocksii (E1) genome NSF_v1n/a
Chr10chromosomeChr10:104773014..104773112 -Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1n/a
Sequence
>PGML0499 ID=PGML0499; Name=PGML0499; organism=Gossypium raimondii; type=genetic_marker; length=99bp
TGTGATCATGTTAATTTGGATTGAAGTTTTTCAACAAAACTAACAGAAAA
TAAATAAAATAAAATATGGGTACTAGGAAAATCAGACGTGGCAAGTTGG