PGML0476, PGML0476 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0476
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(GTT)14
Primer 1PGML0476_F: GGTAGCGCATATTCCCTCAA
Primer 2PGML0476_R: AGAGCCAACCACAGATCCAG
Product Length258
Publication[view all]
CommentBAC_ID=FITB4937.x2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D11chromosomeD11:33574054..33574305 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018225.1chromosomeCM018225.1:31954257..31954511 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_11chromosomeD5_11:34802376..34802631 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_11chromosomeD10_11:31570157..31570411 -Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr7chromosomeDt_chr7:33719350..33719601 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D11chromosomeD11:32205353..32205604 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D11chromosomeGhir_D11:32891130..32891381 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D11chromosomeD11:32048181..32048432 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D11chromosomeD11:33014997..33015248 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D11chromosomeD11:32702103..32702354 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D11chromosomeGbar_D11:32255927..32256181 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D11chromosomeD11:32064364..32064618 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017633.1chromosomeCM017633.1:32177367..32177621 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017659.1chromosomeCM017659.1:32753790..32754041 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017711.1chromosomeCM017711.1:32104338..32104589 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D11chromosomeD11:33293284..33293535 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr11chromosomeChr11:32648584..32648841 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
chr07chromosomechr07:26326767..26327015 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_07chromosomeChr_07:25850421..25850853 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Sequence
>PGML0476 ID=PGML0476; Name=PGML0476; organism=Gossypium raimondii; type=genetic_marker; length=258bp
GGTAGCGCATATTCCCTCAAAGTCCTCTCGTAACGTGCCATGTTTATAGT
TGCGGTTAGATGTGCAAGTGGTGGTGGATCTTCTAGATTTTTATTGTAAG
CCTTGTTAAACAGTGGATTCTTAGATGGTGGTAAATTACCTCCAGCAGGT
AGCAGATTGGGCATTGGCTGTTGCTGTTGTTGTTGTTGTTGTTGTTGTTG
TTGTTGTTGTTGTCAATGATTCCTTTAGATTATTCTTTCTGGATCTGTGG
TTGGCTCT