PGML0474, PGML0474 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0474
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(AAAAT)4
Primer 1PGML0474_F: CAATTTGGCGGACCTACATT
Primer 2PGML0474_R: TCAAATAGATGGAGTTTAATAAGGTTT
Product Length247
Publication[view all]
CommentBAC_ID=FITB8775.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D07chromosomeD07:22044180..22044428 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018221.1chromosomeCM018221.1:21191759..21192006 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_07chromosomeD5_07:20193769..20194015 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr1chromosomeDt_chr1:55248804..55249052 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D07chromosomeD07:21093145..21093393 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D07chromosomeGhir_D07:21636361..21636609 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D07chromosomeD07:20748850..20749098 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D07chromosomeD07:21611131..21611379 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D07chromosomeD07:21178706..21178954 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D07chromosomeGbar_D07:21621890..21622137 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D07chromosomeD07:21230703..21230950 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017629.1chromosomeCM017629.1:21537140..21537387 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017655.1chromosomeCM017655.1:21845319..21845566 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017707.1chromosomeCM017707.1:21512667..21512915 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D07chromosomeD07:21826171..21826419 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:32709296..32709542 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Sequence
>PGML0474 ID=PGML0474; Name=PGML0474; organism=Gossypium raimondii; type=genetic_marker; length=247bp
CAATTTGGCGGACCTACATTTTGGTGGGTTGATCTAGTTAGATCGGTAAG
GATTTGGGTGTGAGCTAAGTTTAATTCGCGAGTTTGAACTATTTTTTTAC
TTCATGTTAGAATTAAGTGACCCAAATCCTTATTTAAATAAAATACTGTG
GTAAAATAAAATAAAAGTAAAATCCCTATAGAATTATACTTCTTTTATTT
CATTTTAGAATAAGGTTTCTAAACCTTATTAAACTCCATCTATTTGA