PGML0445, PGML0445 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0445
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TA)15
Primer 1PGML0445_F: AAATTCTATTCTATTTGTTACCACGTT
Primer 2PGML0445_R: TGTGAATATAGTGATGTGATGGGA
Product Length153
Publication[view all]
CommentBAC_ID=FITB2638.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D10chromosomeD10:52989608..52989753 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018224.1chromosomeCM018224.1:50721699..50721835 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_10chromosomeD5_10:14091662..14091811 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_10chromosomeD10_10:14621335..14621470 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr11chromosomeDt_chr11:43548798..43548943 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D10chromosomeD10:50450320..50450465 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D10chromosomeGhir_D10:52995441..52995584 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D10chromosomeD10:51691290..51691435 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D10chromosomeD10:49996268..49996413 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D10chromosomeGbar_D10:50715039..50715175 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
CM017632.1chromosomeCM017632.1:51168490..51168624 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017658.1chromosomeCM017658.1:52821990..52822123 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
D10chromosomeD10:53040059..53040204 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:48246065..48246214 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr_11chromosomeChr_11:33122091..33122226 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr11chromosomeChr11:35542427..35542714 -Gossypium aridum (D4) genome ISU_v1n/a
Chr11chromosomeChr11:35443463..35443608 -Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0445 ID=PGML0445; Name=PGML0445; organism=Gossypium raimondii; type=genetic_marker; length=153bp
AAATTCTATTCTATTTGTTACCACGTTAAAATTATCTATAATAGAAAAAT
ATATATATATATATATATATATATATATAGCCACGAGTTTGAAAAAAAAA
CTTTTAAACTACGAGAATATTCATTTATTTCCCATCACATCACTATATTC
ACA