PGML0428, PGML0428 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0428
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(T)16
Primer 1PGML0428_F: TGTAGTGAGCAAGGAGCACG
Primer 2PGML0428_R: TAACCCTCTAATGCCGATGC
Product Length319
Publication[view all]
CommentBAC_ID=FITB4525.y1
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D03chromosomeD03:36965786..36966099 +
A03chromosomeA03:18654611..18654928 +
CM018217.1chromosomeCM018217.1:37550428..37550742 +
CM018204.1chromosomeCM018204.1:18238293..18238609 +
D5_02chromosomeD5_02:31533022..31533339 +
KI_2_4chromosomeKI_2_4:33499781..33500037 +
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:92981763..92982083 -
D10_02chromosomeD10_02:36099317..36099636 +
CM016615.1chromosomeCM016615.1:85196486..85196800 +
Dt_chr3chromosomeDt_chr3:14531560..14531873 -
At_chr12chromosomeAt_chr12:65436691..65437008 -
D03chromosomeD03:30991346..30991659 +
A03chromosomeA03:17365818..17366135 +
Ghir_D03chromosomeGhir_D03:36989333..36989646 +
Ghir_A03chromosomeGhir_A03:19506349..19506666 +
D03chromosomeD03:38555574..38555887 +
A03chromosomeA03:18702894..18703211 +
D03chromosomeD03:37929456..37929769 +
A03chromosomeA03:19325067..19325384 +
D03chromosomeD03:37350902..37351215 +
A03chromosomeA03:18593280..18593597 +
Gbar_D03chromosomeGbar_D03:35964481..35964795 +
Gbar_A03chromosomeGbar_A03:18241358..18241674 +
D03chromosomeD03:38547688..38548002 +
A03chromosomeA03:18202501..18202818 +
CM017625.1chromosomeCM017625.1:36954733..36955046 +
CM017612.1chromosomeCM017612.1:18695530..18695848 +
CM017651.1chromosomeCM017651.1:40825529..40825842 +
CM017638.1chromosomeCM017638.1:19267666..19267986 +
CM017703.1chromosomeCM017703.1:38563834..38564148 +
CM017690.1chromosomeCM017690.1:18289545..18289864 +
D03chromosomeD03:39003650..39003963 +
A03chromosomeA03:19665130..19665447 +
Chr02chromosomeChr02:21578576..21578894 -
Chr01chromosomeChr01:99076127..99076448 -
Chr02chromosomeChr02:33617505..33617823 +
B_04chromosomeB_04:18489628..18489946 -
Chr03chromosomeChr03:35067591..35067908 +
chr03chromosomechr03:22446252..22446663 +
Chr03chromosomeChr03:36985817..36986131 +
Chr03chromosomeChr03:19566609..19566926 +
Chr03chromosomeChr03:16708430..16708739 +
F02chromosomeF02:59626958..59627273 +
Chr02chromosomeChr02:36611268..36611584 -
Sequence
>PGML0428 ID=PGML0428; Name=PGML0428; organism=Gossypium raimondii; type=genetic_marker; length=319bp
TGTAGTGAGCAAGGAGCACGGATGTCTGCTATGGATAGCTCGAGTAGAAA
TGCTGGTGACATGCTTGATCGCCTTACTCTCACATATAACAGGTCTCGAT
CTATTTTTATCATTTATGCATGCTTTCATGGTAGTCTTAAAGTCACGTGT
TGAGCCTCATTTGGTTTTTTTTTTTTTTTCTTTCTAATTTTCTTATTCCT
CTTTTCATAGCTCTGAAGTAGATATTTTGTGTGTCGTATTTGTGTTGCAG
AACCCGTCAAGCTTCAATCACAACTGAGTTGATTGAGATTATATCAGGAG
CATCGGCATTAGAGGGTTA