PGML0413, PGML0413 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0413
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(GAA)12
Primer 1PGML0413_F: TGTAGGATACATTCAAACTTAAGGAA
Primer 2PGML0413_R: GAGACGCTCGTGTTAAGGGA
Product Length373
Publication[view all]
CommentBAC_ID=FITB8926.y2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
CM018227.1chromosomeCM018227.1:16218111..16218480 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_13chromosomeD5_13:16043888..16044260 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_13chromosomeD10_13:16227690..16228065 +Gossypium turneri (D10) genome NSF_v1_a2n/a
Ghir_A13chromosomeGhir_A13:27201160..27201519 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
Gbar_D13chromosomeGbar_D13:16192336..16192705 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D13chromosomeD13:15795160..15795529 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017635.1chromosomeCM017635.1:16257062..16257431 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017661.1chromosomeCM017661.1:17066647..17067009 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017713.1chromosomeCM017713.1:16460346..16460715 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
Chr13chromosomeChr13:15966102..15966474 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr13chromosomeChr13:16484188..16484554 +Gossypium thurberi (D1-5) genome CRI_v1n/a
chr13chromosomechr13:13968506..13968869 +Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_13chromosomeChr_13:12964268..12964643 +Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr13chromosomeChr13:16591156..16591548 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr13chromosomeChr13:13625924..13626302 +Gossypium aridum (D4) genome ISU_v1n/a
Chr13chromosomeChr13:10072575..10072935 +Gossypium gossypioides (D6) genome ISU_v1n/a
Chr13chromosomeChr13:12909147..12909512 +Gossypium lobatum (D7) genome ISU_v1n/a
Chr13chromosomeChr13:123079270..123079664 -Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1n/a
Sequence
>PGML0413 ID=PGML0413; Name=PGML0413; organism=Gossypium raimondii; type=genetic_marker; length=373bp
TGTAGGATACATTCAAACTTAAGGAATATTTCAGTAAATACCACTTGAGG
AAGAAGAAGAAGAAGAAGAAGAAGAAGGAAGAAGAATCCTTTTCAGAACA
CACCCTCACATATAAATATGACTGATCTTGCTTAGTGAAATTTAACAAGT
GTCATACGTATCAAAACTTACCTTTTTATTGGTTGACAATTTTCGATAAA
AATATAAATAAGCTCGTTCCCCTCATCAAACTTATCAAGCTAAGCACATA
ATTTGTTTCTAATAGGATAACTTAAAGTCTAACTAACACACTATTCCATA
CAAACTAGGCGTACTATAACTTTGGTGAATACTCATCTCATATTTCCCTT
TTATCCCTTAACACGAGCGTCTC