PGML0326, PGML0326 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0326
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(T)15
Primer 1PGML0326_F: TTTCAACAATTTCGCATAGCA
Primer 2PGML0326_R: TCAAATTGTGCAATCCCATC
Product Length186
Publication[view all]
CommentBAC_ID=FITB3805.x2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D07chromosomeD07:3503963..3504147 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018221.1chromosomeCM018221.1:3262991..3263175 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_07chromosomeD5_07:3211133..3211317 +Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr1chromosomeDt_chr1:42670867..42671051 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D07chromosomeD07:3010144..3010328 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
D07chromosomeD07:3334157..3334341 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D07chromosomeD07:3446939..3447123 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D07chromosomeD07:3332788..3332972 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D07chromosomeGbar_D07:3450452..3450636 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D07chromosomeD07:3402829..3403013 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017629.1chromosomeCM017629.1:3647148..3647332 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017655.1chromosomeCM017655.1:3480986..3481170 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017707.1chromosomeCM017707.1:3438923..3439107 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D07chromosomeD07:3509233..3509417 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:50322210..50322392 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr01chromosomeChr01:3336793..3336980 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr01chromosomeChr01:3390822..3391008 +Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr01chromosomeChr01:2562352..2562539 +Gossypium aridum (D4) genome ISU_v1n/a
Chr01chromosomeChr01:2942345..2942527 +Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0326 ID=PGML0326; Name=PGML0326; organism=Gossypium raimondii; type=genetic_marker; length=186bp
TTTCAACAATTTCGCATAGCATCTAGTTTTTTTTTTTTTTTCTATTATGT
TTATGCTTTCATCTATAACAAAGTTAAGTTATCAAAAAATTTCTCAAGTT
TTTAGGAGTTTCTTCCATTTAAGAAACACCATGAGAGCTTTTTTGATACA
ATAATATTGAATGTGGGATGGGATTGCACAATTTGA