PGML0320, PGML0320 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0320
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TCTCT)2
Primer 1PGML0320_F: TCAACCAAATACCAATAAATTACCTT
Primer 2PGML0320_R: TCCTCCTCCTCCTTCACCTT
Product Length309
Publication[view all]
CommentBAC_ID=FITB3713.x2
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D01chromosomeD01:22878551..22878857 -
A01chromosomeA01:32906179..32906488 -
CM018215.1chromosomeCM018215.1:21827116..21827423 -
CM018202.1chromosomeCM018202.1:30257483..30257792 -
D5_01chromosomeD5_01:20806854..20807161 -
Chr01_CRI-A2_v1.0.a1chromosomeChr01_CRI-A2_v1.0.a1:40785941..40786248 +
D10_01chromosomeD10_01:39483605..39483910 +
CM016614.1chromosomeCM016614.1:63881867..63882177 +
Dt_chr2chromosomeDt_chr2:36718079..36718385 +
At_chr2chromosomeAt_chr2:20874953..20875262 +
D01chromosomeD01:21060427..21060733 -
A01chromosomeA01:31503570..31503879 -
Ghir_D01chromosomeGhir_D01:22394170..22394476 -
Ghir_A01chromosomeGhir_A01:31307037..31307346 -
D01chromosomeD01:21844312..21844618 -
A01chromosomeA01:31140368..31140677 -
D01chromosomeD01:21963547..21963853 -
A01chromosomeA01:31664911..31665220 -
D01chromosomeD01:22304328..22304634 -
A01chromosomeA01:31408254..31408563 -
Gbar_D01chromosomeGbar_D01:22432543..22432850 -
Gbar_A01chromosomeGbar_A01:30563856..30564165 -
D01chromosomeD01:22143027..22143334 -
A01chromosomeA01:30460016..30460325 -
CM017623.1chromosomeCM017623.1:22196848..22197155 -
CM017610.1chromosomeCM017610.1:32157232..32157541 -
CM017649.1chromosomeCM017649.1:23323362..23323669 -
CM017636.1chromosomeCM017636.1:31918858..31919162 -
CM017701.1chromosomeCM017701.1:22131485..22131792 -
CM017688.1chromosomeCM017688.1:30501308..30501617 -
D01chromosomeD01:22700778..22701084 -
A01chromosomeA01:32220930..32221239 -
Chr01chromosomeChr01:33216074..33216382 -
Chr01chromosomeChr01:40858664..40858971 +
B_01chromosomeB_01:30194954..30195262 -
Chr02chromosomeChr02:21672639..21672949 -
chr11chromosomechr11:31150155..31150503 +
chr02chromosomechr02:18229222..18229529 -
Chr_02chromosomeChr_02:15690461..15690768 -
Chr02chromosomeChr02:21126346..21126653 -
Chr02chromosomeChr02:18852082..18852389 -
Chr02chromosomeChr02:13727022..13727330 -
Chr02chromosomeChr02:17084597..17084904 -
Chr01chromosomeChr01:85617418..85617726 +
Sequence
>PGML0320 ID=PGML0320; Name=PGML0320; organism=Gossypium raimondii; type=genetic_marker; length=309bp
TCAACCAAATACCAATAAATTACCTTTCTCTTCTCTTCTCCCCCTTTTTG
TTATATAAAAAATCAATAAATAAAGCTTAAGAGAGAGAGATATTGTTAGT
CCAAGAAAAGAAATTTTTAACAAAGATATGAAGACGTAGAACTAACATTA
ATGTACCAAAATAAACTGTCAAGTATCTACAAACAAGATACCAAAATAAA
AAATTAAGTTCTAACATAAAGATAGGAAAATGTGCAATGAAAATGAGTAA
AATCATGAGAAAATGAAATATATGCATCCTAATCTTCTTAAGGTGAAGGA
GGAGGAGGA