PGML0318, PGML0318 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0318
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TA)13
Primer 1PGML0318_F: GAACAGTTGCATTCCCTTGG
Primer 2PGML0318_R: GAGAACGATACCTTGCTCGG
Product Length320
Publication[view all]
CommentBAC_ID=FITB7552.x1
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D10chromosomeD10:1927447..1927756 +
A10chromosomeA10:1977448..1977758 +
CM018224.1chromosomeCM018224.1:1792212..1792524 +
CM018211.1chromosomeCM018211.1:1890413..1890725 +
D5_10chromosomeD5_10:60739740..60740057 -
Chr10_CRI-A2_v1.0.a1chromosomeChr10_CRI-A2_v1.0.a1:127484185..127484501 -
D10_10chromosomeD10_10:62257046..62257364 -
CM016623.1chromosomeCM016623.1:2415196..2415506 +
scaffold1957.1supercontigscaffold1957.1:30667..30976 +
scaffold26.1supercontigscaffold26.1:1396362..1396672 -
D10chromosomeD10:1645773..1646082 +
A10chromosomeA10:1862561..1862871 +
Ghir_D10chromosomeGhir_D10:2165986..2166292 +
Ghir_A10chromosomeGhir_A10:1600905..1601215 +
D10chromosomeD10:1902174..1902483 +
A10chromosomeA10:1908341..1908651 +
D10chromosomeD10:1970237..1970546 +
A10chromosomeA10:1231696..1232006 +
D10chromosomeD10:2019208..2019517 +
A10chromosomeA10:2028943..2029253 +
Gbar_D10chromosomeGbar_D10:1820561..1820873 +
Gbar_A10chromosomeGbar_A10:1968873..1969185 +
D10chromosomeD10:1861090..1861402 +
A10chromosomeA10:1935597..1935909 +
CM017632.1chromosomeCM017632.1:1848464..1848775 +
CM017619.1chromosomeCM017619.1:2061807..2062117 +
CM017658.1chromosomeCM017658.1:1893297..1893606 +
CM017645.1chromosomeCM017645.1:2085873..2086185 +
CM017710.1chromosomeCM017710.1:1875064..1875376 +
CM017697.1chromosomeCM017697.1:1936813..1937123 +
D10chromosomeD10:1962233..1962542 +
A10chromosomeA10:1999468..1999778 +
Chr10chromosomeChr10:1867329..1867635 +
Chr10chromosomeChr10:1852856..1853172 +
Chr10chromosomeChr10:1661532..1661850 +
B_10chromosomeB_10:97202159..97202483 +
Chr11chromosomeChr11:1639698..1640018 +
Chr_11chromosomeChr_11:1378686..1379256 +
Chr11chromosomeChr11:1864831..1865140 +
Chr11chromosomeChr11:1328497..1328935 +
E10chromosomeE10:111559735..111560041 -
F10chromosomeF10:1853264..1853576 +
Sequence
>PGML0318 ID=PGML0318; Name=PGML0318; organism=Gossypium raimondii; type=genetic_marker; length=320bp
GAACAGTTGCATTCCCTTGGGAAGCAAAAAAATCGCAATCACTTATCTAC
AAAAGCCAGATGGTTGCTAGTAGAGTTTTTCTAGTTACCAATTACAGAAA
ATTCAGCTCACTTATATATATATATATATATATATATAATAATAACATCG
AAAGATATCGAGTTTCCGACCATTCTTCCAGATGAAACACGTTACATGAA
AAGATTTTAGGGGCATACGCAAAGAGATGAATATATAGAATTACAATGAC
ATGATAAAGCAATTACCGGTTTAAACCGAGTCTACACCTTCAACCTGTTG
CCGAGCAAGGTATCGTTCTC