PGML0294, PGML0294 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0294
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(AT)9
Primer 1PGML0294_F: CCCGAGACGAGAATTGCTTA
Primer 2PGML0294_R: GGTGAGTAGTCCGAGGATCG
Product Length267
Publication[view all]
CommentBAC_ID=FITB8471.x1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D05chromosomeD05:38693260..38693519 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018219.1chromosomeCM018219.1:37170817..37171077 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_05chromosomeD5_05:35215155..35215421 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_05chromosomeD10_05:23697127..23697384 -Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr9chromosomeDt_chr9:23599319..23599578 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D05chromosomeD05:37717156..37717415 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D05chromosomeGhir_D05:37997645..37997904 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D05chromosomeD05:37112035..37112294 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D05chromosomeD05:37698468..37698727 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D05chromosomeD05:37353375..37353634 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D05chromosomeGbar_D05:38061291..38061551 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D05chromosomeD05:37504429..37504689 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017627.1chromosomeCM017627.1:37438781..37439043 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017705.1chromosomeCM017705.1:37537039..37537299 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D05chromosomeD05:38521192..38521451 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:35355725..35355991 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr09chromosomeChr09:36287920..36288180 -Gossypium thurberi (D1-5) genome CRI_v1n/a
chr09chromosomechr09:30967129..30967388 -Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_09chromosomeChr_09:29501306..29501565 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr09chromosomeChr09:37462414..37462672 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr09chromosomeChr09:27842752..27843024 -Gossypium aridum (D4) genome ISU_v1n/a
Chr09chromosomeChr09:24578882..24579140 -Gossypium gossypioides (D6) genome ISU_v1n/a
Chr09chromosomeChr09:28525644..28525910 -Gossypium lobatum (D7) genome ISU_v1n/a
E06chromosomeE06:18458041..18458312 +Gossypium stocksii (E1) genome NSF_v1n/a
Sequence
>PGML0294 ID=PGML0294; Name=PGML0294; organism=Gossypium raimondii; type=genetic_marker; length=267bp
CCCGAGACGAGAATTGCTTAAGATTATCGAAACGAGATAATCATCTATGC
CCAGATTTGATATATATATATATATATTTCCTTATTTGATTTCTTTCCTT
TCGTTTGTTTAATTTCCTTTAATGTTTTTAGGATAGTTTATTAAACTATT
CTCTTTTTTATCTTTTATACTATAATCTGATTAGAATATTAATTAGATCA
ATTTATGTTTAAGTAAAGATTAATTTAGTACTAGCCTCCATTGGGTACGA
TCCTCGGACTACTCACC