PGML0291, PGML0291 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0291
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(T)17
Primer 1PGML0291_F: GGAACCCTGAATCATTTGGA
Primer 2PGML0291_R: CTCTGCTCATGACTGGGTGA
Product Length335
Publication[view all]
CommentBAC_ID=FITB8741.x1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D05chromosomeD05:2659333..2659667 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018219.1chromosomeCM018219.1:2452266..2452602 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_05chromosomeD5_05:2298302..2298636 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_05chromosomeD10_05:58178175..58178511 +Gossypium turneri (D10) genome NSF_v1_a2n/a
CM016626.1chromosomeCM016626.1:3948321..3948650 -Gossypium australe (G2) genome CRI_v1.1n/a
Dt_chr9chromosomeDt_chr9:66898617..66898951 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D05chromosomeD05:2496142..2496476 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D05chromosomeGhir_D05:2634636..2634966 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D05chromosomeD05:2449591..2449925 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D05chromosomeD05:2544303..2544636 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D05chromosomeD05:2543552..2543886 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D05chromosomeGbar_D05:2495081..2495415 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D05chromosomeD05:2665168..2665504 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017627.1chromosomeCM017627.1:2504617..2504951 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017653.1chromosomeCM017653.1:2676385..2676720 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017705.1chromosomeCM017705.1:2503596..2503936 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D05chromosomeD05:2568736..2569070 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:2304359..2304693 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
B_05chromosomeB_05:83334520..83334866 +Gossypium anomalum (B1) genome NSF_v1n/a
Chr09chromosomeChr09:2440688..2441013 -Gossypium thurberi (D1-5) genome CRI_v1n/a
chr09chromosomechr09:2257797..2258914 -Gossypium armourianum (D2-1) genome ISU_v1n/a
Chr_09chromosomeChr_09:2556570..2556906 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr09chromosomeChr09:2482752..2483085 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr09chromosomeChr09:1789863..1790197 -Gossypium gossypioides (D6) genome ISU_v1n/a
Chr09chromosomeChr09:2272055..2272459 -Gossypium lobatum (D7) genome ISU_v1n/a
E05chromosomeE05:3012626..3012962 -Gossypium stocksii (E1) genome NSF_v1n/a
Chr13chromosomeChr13:196106266..196106602 +Gossypium rotundifolium (K2) 'Grot K201' genome HAU_v1n/a
Sequence
>PGML0291 ID=PGML0291; Name=PGML0291; organism=Gossypium raimondii; type=genetic_marker; length=335bp
GGAACCCTGAATCATTTGGAGCTAAAGAATCGAAGATTTATGATGACATG
CTGGTAAGACTAGTGTAAAACAGGTTTCTTTTTTTTTTTTTTTTTGATGT
GCAAACAAATAAATATTCATTTAAACATACTTGGAACCCTCCATGGAGAA
ATATTCAATTATGAAGTGGTTGTACGTTGTTACTCGTTTGTTAGAGGTTA
ACTGATTTGCTCGATGACTAATGCTCTCTCCATATGATTTTTTTTTCTGC
AGAATGGACCAAGTGCTTCTATGGAGGCCACCAAAATTTTGGCAGATCCT
CCAGTTGTTCAAGCTTCACCCAGTCATGAGCAGAG