PGML0285, PGML0285 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0285
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TATAA)16
Primer 1PGML0285_F: CATGGGTCGGGTAGCATTTA
Primer 2PGML0285_R: TTGTTCTTTAAGTGAGGTGGCA
Product Length350
Publication[view all]
CommentBAC_ID=FITB8698.x1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D10chromosomeD10:56291802..56292066 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018224.1chromosomeCM018224.1:53726427..53726809 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_10chromosomeD5_10:11025908..11026260 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr11chromosomeDt_chr11:45644351..45644615 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D10chromosomeD10:53535576..53535840 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D10chromosomeGhir_D10:56052013..56052276 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D10chromosomeD10:56017184..56017448 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D10chromosomeD10:54749275..54749539 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D10chromosomeD10:53044295..53044559 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D10chromosomeGbar_D10:53695977..53696362 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D10chromosomeD10:54680945..54681345 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017632.1chromosomeCM017632.1:53664484..53664794 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017658.1chromosomeCM017658.1:55729983..55730298 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017710.1chromosomeCM017710.1:54932724..54933074 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D10chromosomeD10:56133193..56133457 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr10chromosomeChr10:51316759..51317113 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr11chromosomeChr11:52674535..52674842 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Sequence
>PGML0285 ID=PGML0285; Name=PGML0285; organism=Gossypium raimondii; type=genetic_marker; length=350bp
CATGGGTCGGGTAGCATTTAATACCAAGATTCCAAAAACATAAAAATTAA
AAGAAAAAGGGACTAAATTGACAAACCAATTGAACTTGGAACTTTGAAAC
CCTAATTTTCTCCATTCTTTCTTTTTTCTCCTACTTCGTTTTTGCTTCTC
TGTTTCTTTCTCTATTTCTTTTACGTTTAATTCTTTGTGCTATTATAATA
TAATATAATATAATATAATATAATATAATATAATATAATATAATATAATA
TAATATAATATAATATAATATATATAATATATATACTTAATAATATTATA
TATATTAAATTAACATATATTTAACTTATGCCACCTCACTTAAAGAACAA