PGML0277, PGML0277 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0277
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(TTTTA)3
Primer 1PGML0277_F: TTATGCCTGAACTTTGTGTTAGAA
Primer 2PGML0277_R: CGAATTCAAATGATTACAAGACGA
Product Length300
Publication[view all]
CommentBAC_ID=FITB2790.x1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D02chromosomeD02:48276863..48277165 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018216.1chromosomeCM018216.1:45408701..45409004 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_03chromosomeD5_03:21493667..21493966 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_03chromosomeD10_03:21383964..21384265 -Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr5chromosomeDt_chr5:32135712..32136014 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D02chromosomeD02:45841254..45841556 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D02chromosomeGhir_D02:47733396..47733697 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D02chromosomeD02:48292163..48292465 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D02chromosomeD02:49101266..49101568 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D02chromosomeD02:46453040..46453342 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D02chromosomeGbar_D02:45929102..45929405 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D02chromosomeD02:47292142..47292445 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017624.1chromosomeCM017624.1:48143554..48143856 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017650.1chromosomeCM017650.1:49364259..49364562 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017702.1chromosomeCM017702.1:46844816..46845119 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
D02chromosomeD02:49862859..49863161 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr03chromosomeChr03:42296822..42297120 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr05chromosomeChr05:44517181..44517476 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Sequence
>PGML0277 ID=PGML0277; Name=PGML0277; organism=Gossypium raimondii; type=genetic_marker; length=300bp
TTATGCCTGAACTTTGTGTTAGAATTAAGTGACATGAATCCTTATTTAAA
TAAAATACAATAGTAAAATAAAATAAAAGTAAAATCAATATAGAACTACA
CTTTTTTATTTTATTTTAGAATAAGGTTTTTTAAAACCTTATTAAACTCC
ATCTATTTGATATTGATTAGAATAAGGTGATTCAATATTACTACGCTCCT
ATTAGAATATGGTTTTACAAGCCTATAAATAAACATAGTCTACTCCTCTT
GTAATCATTTGAATTCGACATACTACTCGTCTTGTAATCATTTGAATTCG