PGML0254, PGML0254 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0254
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(ATAAAA)3
Primer 1PGML0254_F: TGATTTAGACTTGTTAATGGGACC
Primer 2PGML0254_R: TGGGACAACTTCCATTTGGT
Product Length249
Publication[view all]
CommentBAC_ID=FITB5510.y1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D07chromosomeD07:55524865..55525083 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018221.1chromosomeCM018221.1:53443850..53444068 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_07chromosomeD5_07:48932345..48932592 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
At_chr9chromosomeAt_chr9:48151093..48151311 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D07chromosomeD07:52607853..52608071 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D07chromosomeGhir_D07:56610811..56611029 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D07chromosomeD07:55865793..55866011 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D07chromosomeD07:56238272..56238490 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D07chromosomeD07:52568317..52568535 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D07chromosomeGbar_D07:53811432..53811650 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D07chromosomeD07:54484871..54485089 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017629.1chromosomeCM017629.1:54417781..54417999 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017707.1chromosomeCM017707.1:54499003..54499221 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D07chromosomeD07:56831069..56831287 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:2541023..2541269 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr_01chromosomeChr_01:38280842..38281114 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Sequence
>PGML0254 ID=PGML0254; Name=PGML0254; organism=Gossypium raimondii; type=genetic_marker; length=249bp
TGATTTAGACTTGTTAATGGGACCTAAAATATATCTCTCAAAATTTACCC
ACATTTATCTATACGTACACTTAAGCCTGTTTTAAGTCTCCTAAAATTAT
CTTTTCTGAATTTTTTATTTAATATTTAATAAAAATAAAAATAAATATTC
ACAACTTTAGTTTTCATATAATACAAATTATTTTAATATATTATAAAATT
GAAACTTTTATGAAACAAATGCTGTAAAAACCAAATGGAAGTTGTCCCA