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Cross References
External references for this genetic_marker
Publications
| Year | Publication |
|---|
| 2004 | Rong J, Abbey C, Bowers JE, Brubaker CL, Chang C, Chee PW, Delmonte TA, Ding X, Garza JJ, Marler BS, Park CH, Pierce GJ, Rainey KM, Rastogi VK, Schulze SR, Trolinder NL, Wendel JF, Wilkins TA, Williams-Coplin TD, Wing RA, Wright RJ, Zhao X, Zhu L, Paterson AH. A 3347-locus genetic recombination map of sequence-tagged sites reveals features of genome organization, transmission and evolution of cotton (Gossypium). Genetics. 2004 Jan; 166(1):389-417. |
Map Positions
| # | Map Name | Linkage Group | Bin | Position | Locus | MapViewer |
|---|
| 1 | A1-97 x A2-47, F2 (1999) | A_AA_lg06 | N/A | 92 | A1318 | View |
| 2 | CAMD-E x Seaberry, F2 (1998) | AD_ch05_At.05 | N/A | 24.7 | A1318 | View |
| 3 | Deltapine-61 x Seaberry, F2 (2000) | AD_ch05_At.05 | N/A | 0 | A1318 | View |
| 4 | Gtr x Gra, F2 (2004) | D.05 | N/A | 45.6 | A1318 | View |
| 5 | AD-genome wide Reference Map (2009) | AD_ch19_Dt.05 | N/A | 123 | A1318 | View |
| 6 | AD-genome wide Reference Map (2009) | AD_ch05_At.05 | N/A | 96 | A1318 | View |
| 7 | SMA-4 x A1-97, F2 (2005) | A_SA_lg03 | N/A | 39.1 | A1318 | View |
| 8 | TM-1 x WT-936, F2 (2005) | AD_ch05_At.05 | N/A | 103.5 | A1318 | View |
| 9 | Deltapine-61 x Seaberry, F2 (2000) | AD_ch05_At.05 | N/A | 21.8 | A1318b | View |
| 10 | Palmeri x K-101, F2 (2007) | AD_ch19_Dt.05 | N/A | 99 | A1318b | View |
| 11 | Pima S-7 x Empire, F2 (2007) | AD_ch19_Dt.05 | N/A | 0 | A1318b | View |
| 12 | Palmeri x K-101, F2 (2007) | AD_ch05_At.05 | N/A | 68.7 | A1318a | View |
| 13 | Pima S-7 x Empire, F2 (2007) | AD_ch05_At.05 | N/A | 89 | A1318a | View |
| 14 | TM-1 x WT-936, F2 (2005) | AD_ch05_At.05 | N/A | 110.8 | A1318 | View |
Sequence
>A1318 ID=A1318; Name=A1318; organism=Gossypium herbaceum; type=genetic_marker; length=1733bp
GCCAGACTACACCTCCTAAAGGNANANCAANCTTGCATGCCTGCAGAAGN
AAGAGAAGGGAAGGAGAACCGGAGCACATTGCCAACACTGCAAGCCATAT
TTCCTTTCCCTGGAAAATCTTTTCGTTTGTGGAAAAGACATAATTAACCT
TCCATTTTCCAAGAAATTAGTTGGGAAAAGGTTAGCTGAGATACCTGGGT
GGGGGAAATTACGGGATAGGGTTTTTTCTGCCCTTTTATGGGTTGTGTTG
GTTGGTTCCGAGGCTTGACACCGAACGTGGGGACCACTCCATTTTATTAT
TTATAGGGAGTTATTGTAAAAGAAATACAAATATTTGTTTTCTTCGATTT
CTTCAGTGATTATTACAGAAATTAATAGAGAAATGAGTCCGGCCATTCCA
TTTCATTTTTTCTCACTTGCCTAATCAGTTCAGTCGTAGTTAGTGGTATT
CACTTTAAAAGCGACACTCATGGAGTGGAAAGGAGAAGCAGGTGATCATT
CTTGTCATCTTTCTTTTGTCCATGTTTTCTATTTTATTTATAAAATTCAA
AAAGTTATATTCTTCTTTTTATAAATAATTGGTGTATTCAATATTAATTG
AATTATAACCACCATGAAATTATTGATTGTAAATATTATATCTAAAAATT
TGAGCCATGAATATTTCTGATTTTACGTAGATGAAAACAGATCATGTAAA
CAAAATTATGATATACTATAAATTAGAAAAGCACTCCATATTCACAAAAT
CAATATGGGGAAGTCTAATCGAGGATTCCACAAAATTGAGACCGAAATGG
AATCCAAACCGCTGCAAAATTTCAAAAGTTGGTTGATTGACCCTTTCACC
GGAAACCAAAATCTCAAGCAAACGCTAATTCCNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNAGGAGTTATGTAAATAGAAAAAAAATATTAATTAACTG
AAATTTGACAAAAAAAATTTACCAATATTAATAGCTCGATCTAAATTTTG
AAATCTAAAAAAATAAAACAACTAAATCTCTAATTTTAGAAAATTACATG
AAATATAAGTATTTTTTATTTTTTATTAGAAATAATCTTTAAGTTGAAAT
GGTTAGGACTTATGTTTGATTTTTTTTTTTTTTGAAATTTATTAATTTTA
TTGTAACTTTAAAAAATGGTTTTTTTCCTTTAAAAAGTAACCATCTTCCG
TAATAACTCATTGTTGCCTCGTTTTGGATTTGGAAGTAATGGTAAATAAG
TATTAAGCCGAGGTGAAAATACATTCCTAAAATTTACCAACTTAATGCGT
GGCAGAGCAAGTACGTTGTTGGAAAACCATGTTCTAATAATATTATTATT
TTATTTCAATTGTTTTCGTTTTCAGGGTATCTATTTAGTCTGACGCTGAC
TCTGACTCTCCATTATTAAACTTTAAAAGCATTTGCCTACCAAATAAAAT
AACCTCGCGCGTACCATGTCCATCATCAGATTCCATCCAAGCCCTACCTT
CTTTATATAGAAAAACGAATATATATATTTCAAAGAGCTTCGGATAGAAA
TGGACCCATAAATCTAATGAGGTTCATCAACTAAACATTTTTCGAATTTT
TATTATTTCAGAATGTTTAAAATTTTCTAACCTTTAAATTTAATTTTATC
TCAAATAAAAAATTAATTTATTCTTAAAATCTCTTTGTGCATAAGAAAAA
AAATNTGGAAGCAGAATGATGGGGCCCATATGC
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