P02-64, P02-64 (genetic_marker) Gossypium hirsutum

Marker Overview
NameP02-64
Genbank IDCA994314
TypeRFLP
SpeciesGossypium hirsutum
GermplasmTM-1
Source TypecDNA
Restriction EnzymePst1
Publication[view all]
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankCA994314
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A13chromosomeA13:2480878..2481283 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018214.1chromosomeCM018214.1:2113945..2114350 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr13_CRI-A2_v1.0.a1chromosomeChr13_CRI-A2_v1.0.a1:2218250..2218653 -Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
A13chromosomeA13:2089986..2090391 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A13chromosomeGhir_A13:2132131..2132536 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A13chromosomeA13:2248830..2249235 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A13chromosomeA13:2160508..2160913 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
scaffold59supercontigscaffold59:156687..157092 +Gossypium barbadense (AD2) '3-79' genome HAU_v1n/a
Gbar_A13chromosomeGbar_A13:2174275..2174680 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A13chromosomeA13:2132469..2132874 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017622.1chromosomeCM017622.1:2302688..2303093 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017648.1chromosomeCM017648.1:2190407..2190812 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017700.1chromosomeCM017700.1:1958486..1958891 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
A13chromosomeA13:2376236..2376641 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr13chromosomeChr13:2263916..2264321 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr13chromosomeChr13:2167493..2167897 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Germplasm
Stock NameType
TM-1accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Palmeri x K-101, F2 (2007)AD_ch16_Dt.07N/A68.6P02_64View
2TM-1 x WT-936, F2 (2005)AD_ch07_At.07N/A63.3p02-64View
3AD-genome wide Reference Map (2009)AD_ch16_Dt.07N/A134p02-64View
4AD-genome wide Reference Map (2009)AD_ch07_At.07N/A116p02-64View
5PD 94042 x (AD)4-08, F2 (2016)AD_ch07_At.07N/A107P2_64aView
Sequence
>P02-64 ID=P02-64; Name=P02-64; organism=Gossypium hirsutum; type=genetic_marker; length=406bp
AGTAAATTAAGACCATCCTTTCATTAAATTCAACTTATGTAACATATAGA
AAAAGAAAAAGTATTAAAGCTGCGGGCTACAACTTCTTTCCAAGCCACTT
CAGCCCCCATTTCATTCCACTTTTTTTAACCTTTATCCTCTCTCACCTTT
TCACCCCAAAGATAAAAAAAGTAAAACCTAAGAGTAAATAGCCCCATTAG
ATAAACAAGTAAAAACCCAATTTTCCCCACTGTCAAAACAATCTTAACCA
CACACTTTCCCTCATTTTCCCAGGAAAGTAACCCAACTACTCTCCCACCC
CTTCATATTTTAGACCCTGAAATTTTTTCCTGTGAAGGTTTGACCAAACT
GCCAATTGGAAGGAGCAATGTTCCATGAAGTAGAAGTCCTACGGTCACTG
CCGGTG