P02-03, P02-03 (genetic_marker) Gossypium hirsutum

Marker Overview
NameP02-03
Genbank IDCA994309
TypeRFLP
SpeciesGossypium hirsutum
GermplasmTM-1
Source TypecDNA
Restriction EnzymePst1
Publication[view all]
Cross References
External references for this genetic_marker
DatabaseAccession
DB:genbankCA994309
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
A07chromosomeA07:1874156..1874467 +Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018208.1chromosomeCM018208.1:2074671..2074985 +Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
Chr07_CRI-A2_v1.0.a1chromosomeChr07_CRI-A2_v1.0.a1:1945980..1946295 +Gossypium arboreum (A2) 'SXY1' genome CRI-updated_v1n/a
D10_07chromosomeD10_07:52185238..52185549 -Gossypium turneri (D10) genome NSF_v1_a2n/a
scaffold336.1supercontigscaffold336.1:953499..953810 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
A07chromosomeA07:1781771..1782082 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_A07chromosomeGhir_A07:1830323..1830634 +Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
A07chromosomeA07:1730434..1730745 +Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A07chromosomeA07:1836290..1836601 +Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A07chromosomeA07:1855531..1855842 +Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
scaffold24302supercontigscaffold24302:39059..39373 -Gossypium barbadense (AD2) '3-79' genome HAU_v1n/a
Gbar_A07chromosomeGbar_A07:1935439..1935753 +Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
A07chromosomeA07:1863103..1863417 +Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017616.1chromosomeCM017616.1:1732994..1733305 +Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017642.1chromosomeCM017642.1:1831904..1832215 +Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017694.1chromosomeCM017694.1:1956675..1956989 +Gossypium darwinii (AD5) genome HGS_v1.1n/a
A07chromosomeA07:1861832..1862143 +Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:1871104..1871419 +Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr07chromosomeChr07:1921705..1922020 +Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
B_07chromosomeB_07:2066819..2067131 +Gossypium anomalum (B1) genome NSF_v1n/a
F07chromosomeF07:1698659..1698962 +Gossypium longicalyx (F1) genome NSF_v1n/a
Germplasm
Stock NameType
TM-1accession
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1CAMD-E x Seaberry, F2 (1998)AD_ch19_Dt.05N/A0P02-03View
2AD-genome wide Reference Map (2009)AD_ch19_Dt.05N/A52P02-03View
3Palmeri x K-101, F2 (2007)AD_ch19_Dt.05N/A12.9P02_03View
Sequence
>P02-03 ID=P02-03; Name=P02-03; organism=Gossypium hirsutum; type=genetic_marker; length=312bp
AAGAGAGAAATGAGGCTGTTATAAAAATAATATTACATTACAATTACATA
CAACTTCTCCGAAAATAAGATTAAAAAAAAAACACCATAAACATCAATGA
GCCAGATAAAATCACAACCGTCCAATTCATCATGATCAACGGTTCAGACC
ACCACTTTCGTCAAGCCTACGAATCATATACAAAGCATTACTTGTAACCA
TAGCCACATTTGTGATCTTCTTCTTCACATCATCTTTCACCTCCCGATCA
ACCCCTTCGAACCCATCAACACACGTGTCCTCATACGTCAGCGCCGCACT
CACCCACGTCCG