SWU17715, SWU17715 (genetic_marker) Gossypium hirsutum | Cottongen

Marker Overview

Marker Overview


Name	SWU17715
Genbank ID	N/A
Type	SSR
Species	Gossypium hirsutum
Repeat Motif	(CCTTC)4
Primer 1	SWU17715_F: TCAGCAGGTCCACAAAACTC
Primer 2	SWU17715_R: CACATGTAATGGCTCCTTCG
Polymorphism	P_ SWU17715
Publication	[view all]

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
D05	chromosome	D05:2538288..2538403 .	Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1	CottonGen marker alignment to genome using primer sequences

Publications


Year	Publication
2017	Wang WW, Tan ZY, Xu YT, Zhu AA, Li Y, Yao J, Tian R, Fang XM, Liu XY, Tian YM, Teng ZH, Zhang J, Liu DJ, Liu DX, Shang HH, Liu F, Zhang ZZ. Chromosome structural variation of two cultivated tetraploid cottons and their ancestral diploid species based on a new high-density genetic map. Sci Rep. 2017 Aug 9; 7:7640.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	GX1135 x GX100-2, RIL (2015)	AD_ch05_At.05	N/A	112.5	SWU17715	View
2	GX1135 x GX100-2, RIL (2016)	AD_ch05_At.05	N/A	112.5	SWU17715	View