SWU15413, SWU15413 (genetic_marker) Gossypium hirsutum | Cottongen

Marker Overview

Marker Overview


Name	SWU15413
Genbank ID	N/A
Type	SSR
Species	Gossypium hirsutum
Repeat Motif	(CT)10
Primer 1	SWU15413_F: AGGCAGATTCTCCTTTCAGC
Primer 2	SWU15413_R: CATCTTCAGCAGCCTAACCA
Polymorphism	P_ SWU15413
Publication	[view all]

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
A09	chromosome	A09:67794017..67794196 .	Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1	CottonGen marker alignment to genome using primer sequences

Publications


Year	Publication
2017	Wang WW, Tan ZY, Xu YT, Zhu AA, Li Y, Yao J, Tian R, Fang XM, Liu XY, Tian YM, Teng ZH, Zhang J, Liu DJ, Liu DX, Shang HH, Liu F, Zhang ZZ. Chromosome structural variation of two cultivated tetraploid cottons and their ancestral diploid species based on a new high-density genetic map. Sci Rep. 2017 Aug 9; 7:7640.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	GX1135 x GX100-2, RIL (2015)	AD_ch09_At.09	N/A	123.5	SWU15413	View
2	GX1135 x GX100-2, RIL (2016)	AD_ch09_At.09	N/A	123.5	SWU15413	View
3	GX1135 x VGX100-2, RIL (2016)	AD_ch09_At.09	N/A	44.8	SWU15413	View