PGML0205, PGML0205 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0205
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(A)15
Primer 1PGML0205_F: AGAGGTGAAGTTAGAACACCCA
Primer 2PGML0205_R: CCGTTTCTGGTAAGACTCGC
Product Length101
Publication[view all]
CommentBAC_ID=FITB3143.x2
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D05chromosomeD05:19781913..19782010 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
A05chromosomeA05:21534946..21535043 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018219.1chromosomeCM018219.1:18782372..18782532 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
CM018206.1chromosomeCM018206.1:20797893..20797995 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_05chromosomeD5_05:17604046..17604145 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
At_chr9chromosomeAt_chr9:39974202..39974299 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
Dt_chr9chromosomeDt_chr9:49247436..49247533 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
scaffold1221_A05supercontigscaffold1221_A05:2028..2125 +Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
D05chromosomeD05:19166553..19166650 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D05chromosomeGhir_D05:19243229..19243326 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
Ghir_A05chromosomeGhir_A05:21267874..21267970 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D05chromosomeD05:18820778..18820875 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
A05chromosomeA05:20644812..20644909 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D05chromosomeD05:19079483..19079580 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
A05chromosomeA05:21280126..21280223 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D05chromosomeD05:18957519..18957616 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
A05chromosomeA05:21441491..21441588 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D05chromosomeGbar_D05:19145090..19145250 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
Gbar_A05chromosomeGbar_A05:20408416..20408515 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
CM017627.1chromosomeCM017627.1:18993020..18993181 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017614.1chromosomeCM017614.1:20896876..20896974 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017640.1chromosomeCM017640.1:21261533..21261638 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017705.1chromosomeCM017705.1:19101406..19101566 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
CM017692.1chromosomeCM017692.1:20631994..20632096 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D05chromosomeD05:19553066..19553163 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
A05chromosomeA05:21599803..21599900 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr05chromosomeChr05:22619019..22619120 -Gossypium herbaceum (A1) 'Mutema' genome WHU_v1n/a
Chr05chromosomeChr05:21114302..21114501 -Gossypium arboreum (A2) 'SXY1' genome WHU-updated v1n/a
Chr05chromosomeChr05:17681165..17681265 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Chr09chromosomeChr09:18832742..18832914 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Sequence
>PGML0205 ID=PGML0205; Name=PGML0205; organism=Gossypium raimondii; type=genetic_marker; length=101bp
AGAGGTGAAGTTAGAACACCCAAAAAAAAAAAAAAAGAGAGAGAGAAAAA
GAGGCAAAGAAATTGGAGAGACAAAAATGGAGCGAGTCTTACCAGAAACG
G