PGML0196, PGML0196 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0196
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(CAAAAA)3
Primer 1PGML0196_F: AACGTGCTGAACCAAAGACC
Primer 2PGML0196_R: CCTGAAACTTTCCAGCTTCG
Product Length178
Publication[view all]
CommentBAC_ID=FITB3141.x2
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D11chromosomeD11:57144024..57144199 +
A11chromosomeA11:96823721..96823889 +
CM018225.1chromosomeCM018225.1:54585564..54585739 +
CM018212.1chromosomeCM018212.1:96769446..96769614 +
D5_11chromosomeD5_11:13979389..13979564 -
Chr11_CRI-A2_v1.0.a1chromosomeChr11_CRI-A2_v1.0.a1:20445056..20445224 -
D10_11chromosomeD10_11:53538228..53538399 +
CM016624.1chromosomeCM016624.1:119689655..119689831 +
scaffold269.1supercontigscaffold269.1:1161369..1161544 +
At_chr1chromosomeAt_chr1:47859409..47859577 +
D11chromosomeD11:52233998..52234173 +
A11chromosomeA11:76674293..76674461 +
Ghir_D11chromosomeGhir_D11:57127093..57127268 +
Ghir_A11chromosomeGhir_A11:105766243..105766411 +
D11chromosomeD11:56530066..56530241 +
A11chromosomeA11:104521843..104522011 +
D11chromosomeD11:57076120..57076295 +
A11chromosomeA11:101822382..101822550 +
D11chromosomeD11:54378905..54379080 +
A11chromosomeA11:98907605..98907773 +
Gbar_D11chromosomeGbar_D11:54312380..54312555 +
Gbar_A11chromosomeGbar_A11:94956764..94956932 +
D11chromosomeD11:57185074..57185252 +
A11chromosomeA11:98440662..98440830 +
CM017633.1chromosomeCM017633.1:56477605..56477780 +
CM017620.1chromosomeCM017620.1:102156051..102156219 +
CM017659.1chromosomeCM017659.1:57862703..57862886 +
CM017646.1chromosomeCM017646.1:108755272..108755440 +
CM017711.1chromosomeCM017711.1:54188246..54188424 +
CM017698.1chromosomeCM017698.1:97305656..97305824 +
D11chromosomeD11:56926099..56926274 +
A11chromosomeA11:106505040..106505208 +
Chr11chromosomeChr11:110083136..110083304 +
Chr11chromosomeChr11:108379258..108379426 +
Chr11chromosomeChr11:12281087..12281264 -
B_11chromosomeB_11:82369973..82370136 +
Chr07chromosomeChr07:54296650..54296821 +
chr07chromosomechr07:38789446..38789613 +
Chr_07chromosomeChr_07:36153863..36154078 +
Chr07chromosomeChr07:54834685..54834862 +
Chr07chromosomeChr07:32730791..32731053 +
Chr07chromosomeChr07:28983700..28983867 +
E11chromosomeE11:93689659..93689829 +
F11chromosomeF11:82423098..82423256 +
Sequence
>PGML0196 ID=PGML0196; Name=PGML0196; organism=Gossypium raimondii; type=genetic_marker; length=178bp
AACGTGCTGAACCAAAGACCCTTGAAAATCGAAAACTCTGTCATCTGAAG
ACAACTGAAACAAAAACAAAAACAAAAAGAAACTAAATTAATTTTCTAGA
AACAAAATTGGAAGAAAAAAAAAAAAAGAAACCTGGTCGAACCCGAAATC
AAGATAGCCGAAGCTGGAAAGTTTCAGG