PGML0167, PGML0167 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0167
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(CTAG)5
Primer 1PGML0167_F: AGCTGCAAGGAAATGTTTGG
Primer 2PGML0167_R: GAGAATCCCATGTGAAAGGC
Product Length209
Publication[view all]
CommentBAC_ID=FITB7884.x1
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
D02chromosomeD02:8258484..8258688 +
A02chromosomeA02:8603258..8603451 +
CM018216.1chromosomeCM018216.1:7498879..7499083 +
CM018203.1chromosomeCM018203.1:7737132..7737325 +
D5_03chromosomeD5_03:56363614..56363822 -
Chr03_CRI-A2_v1.0.a1chromosomeChr03_CRI-A2_v1.0.a1:8765158..8765351 +
D10_03chromosomeD10_03:57765766..57765971 -
CM016616.1chromosomeCM016616.1:142987633..142987844 -
scaffold2214.1supercontigscaffold2214.1:107884..108077 -
Dt_chr5chromosomeDt_chr5:52675240..52675444 -
D02chromosomeD02:8076736..8076940 +
A02chromosomeA02:7937238..7937431 +
Ghir_D02chromosomeGhir_D02:7858990..7859194 +
Ghir_A02chromosomeGhir_A02:7891753..7891946 +
D02chromosomeD02:7549791..7549995 +
A02chromosomeA02:7606469..7606662 +
D02chromosomeD02:7894864..7895068 +
A02chromosomeA02:8154326..8154519 +
D02chromosomeD02:7837660..7837864 +
A02chromosomeA02:8132943..8133136 +
Gbar_D02chromosomeGbar_D02:8004419..8004623 +
Gbar_A02chromosomeGbar_A02:7843460..7843653 +
D02chromosomeD02:7507556..7507760 +
A02chromosomeA02:7793675..7793868 +
CM017624.1chromosomeCM017624.1:8280098..8280302 +
CM017611.1chromosomeCM017611.1:7783634..7783827 +
CM017650.1chromosomeCM017650.1:8528272..8528476 +
CM017637.1chromosomeCM017637.1:8152306..8152499 +
CM017702.1chromosomeCM017702.1:7917801..7918005 +
CM017689.1chromosomeCM017689.1:7909365..7909558 +
D02chromosomeD02:8122426..8122630 +
A02chromosomeA02:8220382..8220575 +
Chr03chromosomeChr03:123271207..123271400 -
Chr03chromosomeChr03:122019757..122019950 -
Chr03chromosomeChr03:7031707..7031911 +
B_03chromosomeB_03:98509514..98509719 -
Chr05chromosomeChr05:7828558..7828763 +
chr05chromosomechr05:5834394..5834599 +
Chr_05chromosomeChr_05:5939663..5939868 +
Chr05chromosomeChr05:7937236..7937440 +
Chr05chromosomeChr05:5859079..5859368 +
Chr05chromosomeChr05:6628715..6628926 +
E03chromosomeE03:10444513..10444718 +
Chr03chromosomeChr03:193361127..193361332 -
Sequence
>PGML0167 ID=PGML0167; Name=PGML0167; organism=Gossypium raimondii; type=genetic_marker; length=209bp
AGCTGCAAGGAAATGTTTGGATTTTGTAACGGAGGTTAAAGGACAAAAGA
AAGGGCAATGATAAACTGCAAGACTACTTTTCAAAGAACAGCATTGGGGA
TGTGATTTATCATTGATGATGGATTCATAACATATATATATCCTAGCTAG
CTAGCTAGCTAGTTAGTGGTTAGGCCGCCTGCAAGCTAAGCCTTTCACAT
GGGATTCTC