PGML0154, PGML0154 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0154
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(CAAAT)6
Primer 1PGML0154_F: GAGCTGCCGTTAAACACACA
Primer 2PGML0154_R: TTGCAGTTCAATTCCTAACAAA
Product Length263
Publication[view all]
CommentBAC_ID=FITB10306.x1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D05chromosomeD05:40108690..40108942 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018219.1chromosomeCM018219.1:38116614..38116874 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_05chromosomeD5_05:36230757..36231018 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D10_05chromosomeD10_05:24709211..24709450 -Gossypium turneri (D10) genome NSF_v1_a2n/a
Dt_chr9chromosomeDt_chr9:13333254..13333506 -Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D05chromosomeD05:38766874..38767126 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D05chromosomeGhir_D05:39025447..39025699 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D05chromosomeD05:38749243..38749495 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D05chromosomeD05:38116941..38117193 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D05chromosomeGbar_D05:39020563..39020823 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
CM017627.1chromosomeCM017627.1:38428209..38428461 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017653.1chromosomeCM017653.1:39312806..39313063 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017705.1chromosomeCM017705.1:38477003..38477263 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D05chromosomeD05:39559044..39559296 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr09chromosomeChr09:37091586..37091834 +Gossypium thurberi (D1-5) genome CRI_v1n/a
Chr_09chromosomeChr_09:30160145..30160385 -Gossypium harknessii (D2-2) genome ISU_v1n/a
Chr09chromosomeChr09:38543049..38543299 -Gossypium davidsonii (D3d-8) genome CRI_v1n/a
Chr09chromosomeChr09:28367858..28368098 -Gossypium aridum (D4) genome ISU_v1n/a
Chr09chromosomeChr09:29117191..29117437 -Gossypium lobatum (D7) genome ISU_v1n/a
Sequence
>PGML0154 ID=PGML0154; Name=PGML0154; organism=Gossypium raimondii; type=genetic_marker; length=263bp
GAGCTGCCGTTAAACACACATTCTTCAAATTCATCATTTAGCAAATAAAA
AATAAAATAAAAAATTTGATTTTAGATTAGGTCGATAATCTCTCTATTGT
TATAAGGATCAAATCAGTTTTTATATTATTGAAAAGAATCAAATCAAATC
AAATCAAATCAAATCAAATTAGAATTAAGTTAATTTTTCTCGTTTAATAG
AATTAATATTTTTAAAGTTTTTATGGTTATATAAATAAATTTTTGTTAGG
AATTGAACTGCAA