PGML0121, PGML0121 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0121
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(CGTTTT)
Primer 1PGML0121_F: TCCGATCACACCTCATCAAA
Primer 2PGML0121_R: GAAAGCTCTTTGAGTTTCAAGCA
Product Length260
Publication[view all]
CommentBAC_ID=FITB1622.x1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D01chromosomeD01:45679799..45680155 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018215.1chromosomeCM018215.1:44425783..44426139 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_01chromosomeD5_01:39360800..39361058 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
D01chromosomeD01:42707970..42708326 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D01chromosomeGhir_D01:44362782..44363138 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D01chromosomeD01:46292522..46292878 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D01chromosomeD01:45745614..45745970 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D01chromosomeD01:43215819..43216174 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D01chromosomeGbar_D01:44619523..44619879 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D01chromosomeD01:45365044..45365400 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017623.1chromosomeCM017623.1:45444880..45445236 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017649.1chromosomeCM017649.1:46617594..46617950 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017701.1chromosomeCM017701.1:44821983..44822339 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D01chromosomeD01:46261194..46261550 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr01chromosomeChr01:34883687..34883946 -Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Sequence
>PGML0121 ID=PGML0121; Name=PGML0121; organism=Gossypium raimondii; type=genetic_marker; length=260bp
TCCGATCACACCTCATCAAAAAAAGATCGGTGGCGACTCCCGTTTTCGTT
TTCGTTTTCAAAACCCAAGTTGACCTCATTTTCATCAAAAAAACGATGTC
AACAACCATAACTAAGAATCAGTTTGAAAAGAAGTGGAATGATATGCAAG
TTCAATTTGATTTTTTGAACAAAAAGAATATGAACTTGTATAACTAATTT
ACAAAATTTTATATGGGGGATCAAAAACTAAATGACATGCTTGAAACTCA
AAGAGCTTTC