PGML0114, PGML0114 (genetic_marker) Gossypium raimondii

Marker Overview
NamePGML0114
Genbank IDN/A
TypeSSR
SpeciesGossypium raimondii
Repeat Motif(ATTTT)3
Primer 1PGML0114_F: AAATATGTGATTTCCACGTACACA
Primer 2PGML0114_R: GCGAGTTAGGATAACTTAGGCG
Product Length224
Publication[view all]
CommentBAC_ID=FITB1635.x1
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
D07chromosomeD07:40107729..40107952 -Gossypium hirsutum (AD1) 'TM-1' genome UTX-JGI-Interim-release_v1.1n/a
CM018221.1chromosomeCM018221.1:38233046..38233269 -Gossypium barbadense (AD2) '3-79' genome HGS_v1.1n/a
D5_07chromosomeD5_07:35917172..35917393 -Gossypium raimondii (D5) 'D5-4' genome NSF_v1n/a
Dt_chr1chromosomeDt_chr1:84226294..84226517 +Gossypium hirsutum (AD1) 'TM-1' genome CGP-BGI_v1n/a
D07chromosomeD07:38079386..38079609 -Gossypium hirsutum (AD1) 'TM-1' genome NAU-NBI_v1.1n/a
Ghir_D07chromosomeGhir_D07:38779701..38779921 -Gossypium hirsutum (AD1) 'TM-1' genome HAU_v1 / v1.1n/a
D07chromosomeD07:38675722..38675945 -Gossypium hirsutum (AD1) 'TM-1' genome ZJU-improved_v2.1_a1n/a
D07chromosomeD07:39046671..39046894 -Gossypium hirsutum (AD1) 'TM-1' genome CRI_v1n/a
D07chromosomeD07:38041167..38041390 -Gossypium hirsutum (AD1) 'ZM24' genome CRI_v1n/a
Gbar_D07chromosomeGbar_D07:38353936..38354159 -Gossypium barbadense (AD2) '3-79' genome HAU_v2_a1n/a
D07chromosomeD07:39292336..39292559 -Gossypium barbadense (AD2) 'H7124' genome ZJU_v1.1_a1n/a
CM017629.1chromosomeCM017629.1:38684593..38684816 -Gossypium tomentosum (AD3) genome HGS_v1.1n/a
CM017655.1chromosomeCM017655.1:39574887..39575110 -Gossypium mustelinum (AD4) genome JGI_v1.1n/a
CM017707.1chromosomeCM017707.1:38826993..38827216 -Gossypium darwinii (AD5) genome HGS_v1.1n/a
D07chromosomeD07:39489583..39489806 -Gossypium hirsutum (AD1) 'TM-1' genome UTX_v2.1n/a
Chr07chromosomeChr07:16341138..16341361 +Gossypium raimondii (D5) 'Grai D502' genome HAU_v1n/a
Sequence
>PGML0114 ID=PGML0114; Name=PGML0114; organism=Gossypium raimondii; type=genetic_marker; length=224bp
AAATATGTGATTTCCACGTACACATGGAATAAAAATTTTAATCTATTTTA
TTTTATTTTATCAGGTGAAGATGTATCATGCATACAACATAGAGTTTCTA
CAACTGCATATGTATTATGTTTTTAACTATGTTACTAGTGTCACGGACTT
AGAGTTTTCCCACGCGATCCGTGCGGCCTTAGGCAGTTTCTTTCCTTAAA
AACGCCTAAGTTATCCTAACTCGC