g.raimondii_cottongen_reftransV1_0001237, g.raimondii_cottongen_reftransV1_0001237 (contig) Gossypium raimondii
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A0D2V3M5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G086900 PE=4 SV=1) HSP 1 Score: 593.964 bits (1530), Expect = 0.000e+0 Identity = 306/306 (100.00%), Postives = 306/306 (100.00%), Query Frame = 1 Query: 136 ICKMESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 1053 ICKMESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDINNNSNTNSNNNENNNANNAADKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP Sbjct: 20 ICKMESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDINNNSNTNSNNNENNNANNAADKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 325
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A0D2VWV0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G086900 PE=4 SV=1) HSP 1 Score: 586.645 bits (1511), Expect = 0.000e+0 Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 1053 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDINNNSNTNSNNNENNNANNAADKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP Sbjct: 1 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDINNNSNTNSNNNENNNANNAADKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 303
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A0D2RZL2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G086900 PE=4 SV=1) HSP 1 Score: 583.563 bits (1503), Expect = 0.000e+0 Identity = 301/303 (99.34%), Postives = 301/303 (99.34%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 1053 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDINNNSNTNSNNNENNNANNAADKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFE SFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP Sbjct: 1 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDINNNSNTNSNNNENNNANNAADKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEVTSFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 303
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A0D2V3L8_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_012G086900 PE=4 SV=1) HSP 1 Score: 558.14 bits (1437), Expect = 0.000e+0 Identity = 289/290 (99.66%), Postives = 289/290 (99.66%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPET 1014 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDINNNSNTNSNNNENNNANNAADKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPE Sbjct: 1 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDINNNSNTNSNNNENNNANNAADKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPEA 290
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A061ED00_THECC (DCD domain protein isoform 1 OS=Theobroma cacao GN=TCM_017191 PE=4 SV=1) HSP 1 Score: 550.051 bits (1416), Expect = 0.000e+0 Identity = 276/304 (90.79%), Postives = 291/304 (95.72%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXX-DKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 1053 MES+NSFWQLGDDLRGQSK SEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAE+RTRDKFGF EDNKFENLNFNMLNLDSKIGD+ SKS+FRN IYN +AVYQKNNS+++GNL+ NKYSGNNH NKD+NNNSNTN+NN+ N+ N A DKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRK+CKALEEDAFRPVLHHYDGPKFRLELSVPETLDL+DLCEQAGSP Sbjct: 1 MESINSFWQLGDDLRGQSKVSEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEIRTRDKFGFQEDNKFENLNFNMLNLDSKIGDNASKSSFRNSIYNMNAVYQKNNSNSLGNLAGNKYSGNNHSNKDVNNNSNTNNNNSNENSNANNAADKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKLCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGSP 304
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A0D2SFN1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G073500 PE=4 SV=1) HSP 1 Score: 530.02 bits (1364), Expect = 2.625e-180 Identity = 265/303 (87.46%), Postives = 288/303 (95.05%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 1053 M SM+SFWQLGD LRGQSKASED+ WLMVASKLAEQTR KGER++NLDLSKGPAE+RTRDKFGF EDNKFENLNFNMLNLDSKIGD++SKS+FRNG YN +AVYQKNNS+++GNL+ NKYSGNNH +K +NNNS+T++NN+ N+ANNA DKRFKTLPA ETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAA+FGGSNIDPTAWEDKKCKGESRFPAQVRI IRK+CKALEEDAFRPVLHHYDGPKFRLELSVPETLDL+DLCEQAGSP Sbjct: 1 MGSMDSFWQLGDYLRGQSKASEDNHWLMVASKLAEQTRTKGERLSNLDLSKGPAEIRTRDKFGFREDNKFENLNFNMLNLDSKIGDNVSKSSFRNGTYNINAVYQKNNSNSLGNLAGNKYSGNNHSSKYVNNNSSTSNNNSNENSANNAVDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAATFGGSNIDPTAWEDKKCKGESRFPAQVRICIRKLCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGSP 303
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A0D2TAL4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G073500 PE=4 SV=1) HSP 1 Score: 528.48 bits (1360), Expect = 9.130e-180 Identity = 264/303 (87.13%), Postives = 288/303 (95.05%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 1053 M SM+SFWQLGD LRGQSKASED+ WLMVASKLAEQTR KGER++NLDLSKGPAE+RTRDKFGF EDNKFENLNFNMLNLDSKIGD++SKS+FRNG YN +AVYQKNNS+++GNL+ NKYSGNNH +K +NNNS+T++NN+ N+ANNA DKRFKTLPA ETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAA+FGGSNIDPTAWEDKKCKGESRFPAQV+I IRK+CKALEEDAFRPVLHHYDGPKFRLELSVPETLDL+DLCEQAGSP Sbjct: 1 MGSMDSFWQLGDYLRGQSKASEDNHWLMVASKLAEQTRTKGERLSNLDLSKGPAEIRTRDKFGFREDNKFENLNFNMLNLDSKIGDNVSKSSFRNGTYNINAVYQKNNSNSLGNLAGNKYSGNNHSSKYVNNNSSTSNNNSNENSANNAVDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAATFGGSNIDPTAWEDKKCKGESRFPAQVKICIRKLCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGSP 303
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A0D2P4N1_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G073500 PE=4 SV=1) HSP 1 Score: 524.242 bits (1349), Expect = 4.230e-178 Identity = 263/303 (86.80%), Postives = 286/303 (94.39%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 1053 M SM+SFWQLGD LRGQSKASED+ WLMVASKLAEQTR KGER++NLDLSKGPAE+RTRDKFGF EDNKFENLNFNMLNLDSKIGD++SKS+FRNG YN +AVYQKNNS+++GNL+ NKYSGNNH +K +NNNS+T++NN+ N+ANNA DKRFKTLPA ETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAA+FGGSNIDPTAWEDKKCKGESRFPAQVRI IRK+CKALEEDAFRPVLHHYDGPKFRLELSVPETLDL+DLCEQA P Sbjct: 1 MGSMDSFWQLGDYLRGQSKASEDNHWLMVASKLAEQTRTKGERLSNLDLSKGPAEIRTRDKFGFREDNKFENLNFNMLNLDSKIGDNVSKSSFRNGTYNINAVYQKNNSNSLGNLAGNKYSGNNHSSKYVNNNSSTSNNNSNENSANNAVDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAATFGGSNIDPTAWEDKKCKGESRFPAQVRICIRKLCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLLDLCEQADFP 303
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: A0A0D2S8M6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_007G073500 PE=4 SV=1) HSP 1 Score: 520.776 bits (1340), Expect = 1.653e-176 Identity = 265/316 (83.86%), Postives = 288/316 (91.14%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFG-------------LPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGSP 1053 M SM+SFWQLGD LRGQSKASED+ WLMVASKLAEQTR KGER++NLDLSKGPAE+RTRDKFGF EDNKFENLNFNMLNLDSKIGD++SKS+FRNG YN +AVYQKNNS+++GNL+ NKYSGNNH +K +NNNS+T++NN+ N+ANNA DKRFKTLPA ETLPRNEVLGGYIFVCNNDTMQEDLKRQLFG LPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAA+FGGSNIDPTAWEDKKCKGESRFPAQVRI IRK+CKALEEDAFRPVLHHYDGPKFRLELSVPETLDL+DLCEQAGSP Sbjct: 1 MGSMDSFWQLGDYLRGQSKASEDNHWLMVASKLAEQTRTKGERLSNLDLSKGPAEIRTRDKFGFREDNKFENLNFNMLNLDSKIGDNVSKSSFRNGTYNINAVYQKNNSNSLGNLAGNKYSGNNHSSKYVNNNSSTSNNNSNENSANNAVDKRFKTLPAAETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGGISYMLLFSHLIGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAATFGGSNIDPTAWEDKKCKGESRFPAQVRICIRKLCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLLDLCEQAGSP 316
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Match: M5WTC6_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa009447mg PE=4 SV=1) HSP 1 Score: 509.605 bits (1311), Expect = 1.812e-172 Identity = 245/302 (81.13%), Postives = 269/302 (89.07%), Query Frame = 1 Query: 145 MESMNSFWQLGDDLRGQSKASEDHKWLMVASKLAEQTRIKGERMNNLDLSKGPAEVRTRDKFGFHEDNKFENLNFNMLNLDSKIGDSISKSTFRNGIYNTDAVYQKNNSHNIGNLSANKYSGNNHCNKDIXXXXXXXXXXXXXXXXXXXXDKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQAGS 1050 M+SMNSFWQLGD+LRGQSK +ED KW M ASKLAEQTR+KGERMNNLDLSKGPAE R RDKFGF EDNKFE+LNFNML+LDSK+ +++SKS+FRNGIYN +AVYQKNN+ +GN++ NKYS +N+N NN + N +KRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIR+RK+CKALEEDAFRPVLHHYDGPKFRLELS+PETLDL+DLCEQAGS Sbjct: 1 MDSMNSFWQLGDELRGQSKVAEDQKWFMAASKLAEQTRVKGERMNNLDLSKGPAETRARDKFGFQEDNKFESLNFNMLSLDSKVNENVSKSSFRNGIYNMNAVYQKNNASVVGNMTGNKYSNKEI------------NNSNINNESANTVEKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRVRKLCKALEEDAFRPVLHHYDGPKFRLELSIPETLDLLDLCEQAGS 290
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: B2_DAUCA (B2 protein OS=Daucus carota PE=2 SV=1) HSP 1 Score: 274.633 bits (701), Expect = 6.041e-85 Identity = 120/150 (80.00%), Postives = 139/150 (92.67%), Query Frame = 1 Query: 595 DKRFKTLPATETLPRNEVLGGYIFVCNNDTMQEDLKRQLFGLPPRYRDSVRAITPGLPLFLYNYTTHQLHGIFEAASFGGSNIDPTAWEDKKCKGESRFPAQVRIRIRKVCKALEEDAFRPVLHHYDGPKFRLELSVPETLDLMDLCEQA 1044 +KRFKTLP E+LPRNE +GGYIFVCNNDTMQE+LKRQLFGLPPRYRDSVRAITPGLPLFLYNY+THQLHG+FEAASFGG+NIDPTAWEDKK +GESRFPAQVR+ RK+C+ LEED+FRP+LHHYDGPKFRLEL++PE + L+D+ E+ Sbjct: 56 EKRFKTLPPAESLPRNETVGGYIFVCNNDTMQENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTHQLHGVFEAASFGGTNIDPTAWEDKKNQGESRFPAQVRVMTRKICEPLEEDSFRPILHHYDGPKFRLELNIPEAISLLDIFEET 205
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: SUS1_ARATH (Transcription and mRNA export factor SUS1 OS=Arabidopsis thaliana GN=SUS1 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.643e-36 Identity = 79/117 (67.52%), Postives = 99/117 (84.62%), Query Frame = -3 Query: 1885 MKHSVNRPPTPDGAED------QGNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAAL 2217 MKHSVNRPPTPD ED + ++ TL+EIIN+KL+ESGEKE LMEL+R+RL+ECGWKDEM+ CR +VKKKGR +VT+D+L+ +ITPKGRASVPD VKAELL RI++F++SAAL Sbjct: 1 MKHSVNRPPTPD--EDDVADGFEKDKVTLREIINVKLVESGEKENLMELVRDRLVECGWKDEMRIACREHVKKKGRKDVTVDELIRVITPKGRASVPDSVKAELLNRIQNFIVSAAL 115
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_TAEGU (Transcription and mRNA export factor ENY2 OS=Taeniopygia guttata GN=ENY2 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 5.590e-22 Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = -3 Query: 1888 GNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2166 + ++ IN KLIE+GE+ERL ELLR +LIECGWKD++KA C+ +K+KG +VT+DDLV ITPKGRA VPD VK ELLQRIR+FL A Sbjct: 2 NKDAQMRATINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKDVIKEKGLEHVTVDDLVAEITPKGRALVPDSVKKELLQRIRTFLAQHA 94
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_MOUSE (Transcription and mRNA export factor ENY2 OS=Mus musculus GN=Eny2 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.101e-22 Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = -3 Query: 1888 GNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2166 + ++ IN KLIE+GE+ERL ELLR +LIECGWKD++KA C+ +K+KG +VT+DDLV ITPKGRA VPD VK ELLQRIR+FL A Sbjct: 7 NKDAQMRAAINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPKGRALVPDSVKKELLQRIRTFLAQHA 99
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_HUMAN (Transcription and mRNA export factor ENY2 OS=Homo sapiens GN=ENY2 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.101e-22 Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = -3 Query: 1888 GNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2166 + ++ IN KLIE+GE+ERL ELLR +LIECGWKD++KA C+ +K+KG +VT+DDLV ITPKGRA VPD VK ELLQRIR+FL A Sbjct: 7 NKDAQMRAAINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPKGRALVPDSVKKELLQRIRTFLAQHA 99
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_BOVIN (Transcription and mRNA export factor ENY2 OS=Bos taurus GN=ENY2 PE=3 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 6.101e-22 Identity = 57/93 (61.29%), Postives = 71/93 (76.34%), Query Frame = -3 Query: 1888 GNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2166 + ++ IN KLIE+GE+ERL ELLR +LIECGWKD++KA C+ +K+KG +VT+DDLV ITPKGRA VPD VK ELLQRIR+FL A Sbjct: 7 NKDAQMRAAINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPKGRALVPDSVKKELLQRIRTFLAQHA 99
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_DANRE (Transcription and mRNA export factor ENY2 OS=Danio rerio GN=eny2 PE=3 SV=1) HSP 1 Score: 96.2857 bits (238), Expect = 9.302e-22 Identity = 56/89 (62.92%), Postives = 70/89 (78.65%), Query Frame = -3 Query: 1900 GNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFL 2166 E ++ IN KLIE GE+ERL ELLR +LIECGW+D++KALC+ +K+KG NVT++DLV +TPKGRA VPD VK ELLQRIR+FL Sbjct: 2 SKESQMRAAINQKLIEMGERERLKELLRAKLIECGWRDQLKALCKEVIKEKGIENVTVEDLVAGVTPKGRALVPDSVKKELLQRIRAFL 90
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_XENLA (Transcription and mRNA export factor ENY2 OS=Xenopus laevis GN=eny2 PE=3 SV=1) HSP 1 Score: 95.1301 bits (235), Expect = 2.400e-21 Identity = 55/91 (60.44%), Postives = 71/91 (78.02%), Query Frame = -3 Query: 1888 EPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2160 + ++ +IN KLIE+GE+ERL ELLR +LIECGW+D++KA C+ + +KG +VT+DDLV ITPKGRA VPD VK ELLQRIR+FL A Sbjct: 4 DAQMKAVINQKLIETGERERLKELLRAKLIECGWRDQLKAHCKDVINEKGVEHVTVDDLVAEITPKGRALVPDSVKKELLQRIRAFLAQHA 94
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2_XENTR (Transcription and mRNA export factor ENY2 OS=Xenopus tropicalis GN=eny2 PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 8.155e-21 Identity = 55/91 (60.44%), Postives = 70/91 (76.92%), Query Frame = -3 Query: 1888 EPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2160 + ++ IN KLIE+GE+ERL ELLR +LIECGW+D++KA C+ + +KG +VT+DDLV ITPKGRA VPD VK ELLQRIR+FL A Sbjct: 4 DAQMKAAINQKLIETGERERLKELLRAKLIECGWRDQLKAHCKDVINEKGVEHVTVDDLVAEITPKGRALVPDSVKKELLQRIRAFLAQHA 94
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Match: ENY2A_SALSA (Transcription and mRNA export factor ENY2-1 OS=Salmo salar GN=eny2-1 PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 1.275e-18 Identity = 52/93 (55.91%), Postives = 67/93 (72.04%), Query Frame = -3 Query: 1888 GNEPTLQEIINIKLIESGXXXXXXXXXXXXLIECGWKDEMKALCRSYVKKKGRNNVTLDDLVHLITPKGRASVPDFVKAELLQRIRSFLMSAA 2166 + ++ IN KL E GE+ERL ELLR +L ECGW+D++KALC+ +K+KG + T++DLV ITPKGR VPD VK ELLQRIR+FL A Sbjct: 2 SKDSKMRATINQKLTEMGERERLKELLRAKLTECGWRDQLKALCKDVIKEKGLEHATVEDLVVEITPKGRVLVPDSVKRELLQRIRAFLAQHA 94 The following BLAST results are available for this feature:
BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy TrEMBL
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.raimondii_cottongen_reftransV1_0001237 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-09 (Homology Analysis for Gossypium raimondii CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium raimondii CottonGen RefTrans V1
Date Performed: 2016-11-09
Sequences
The
following sequences are available for this feature:
contig sequence >g.raimondii_cottongen_reftransV1_0001237 ID=g.raimondii_cottongen_reftransV1_0001237; Name=g.raimondii_cottongen_reftransV1_0001237; organism=Gossypium raimondii; type=contig; length=2285bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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