2014 Work Completed

  • [DATA] Added 5,839 new SNP primers from USDA CFB (12/24/14)
  • [WEB] US National Cotton Germplasm Collection Standardized Descriptors and Rating Scales online available (12/16/14)
  • [DATA] Added 96 new Monsanto SNP primer, probe, and map positions (11/20/14)
  • [TOOL] CottonGen JBrowse available (9/15/14)
  • [WEB] Moved from CottonDB and updated National and Statewide Cotton Variety Tests page (9/9/14)
  • [DATA] BGI G. arboreum genome sequence and annotation released on cottongen (9/9/14)
  • [TOOL] Sequence data on BLAST servers were updated. (9/5/14)
  • [TOOL] CottonCyc Pathways is online available. The current gene models were the JGI v2.0 D genome assembly of Gossypium raimondii. (7/17/2014)
  • [DATA] Added 78,340 non-redundant SSR primer data (22,740 existed + 55,600 new) on CottonGen Data Download Page (6/30/14)
  • [DATA] Added 55,134 new NBRI_GE SSR primers (removed 1,008 redundants from 56,142 origins) into CottonGen SSR primer data file (6/30/14)
  • [DATA] Added 335 mGhCIR new SSR primers (removed 4 redundants from 339 origins) into CottonGen SSR primer data file (6/25/14)
  • [DATA] Added 130 NTU new SSR primers (removed 2 redundants from 132 origins) into CottonGen SSR primer data file (6/25/14)
  • [DATA] Added 66,444 new NBRI SNP sequences on CottonGen Data Download Page (6/22/14)
  • [DATA] Added 39,099 new CIR SNP sequences on CottonGen Data Download Page (6/22/14)
  • [DATA] Checked SSR primer redundancy for 23,374 CottonGen existed SSRs and removed 634 duplicates resulting 22,740 no duplicate SSRs (6/17/14)
  • [DATA] Added 18,747 cleaned SSR marker sequences on CottonGen Data Download Page. [5/31/14)
  • [WEB] Environment Details Page is online available (5/30/14)
  • [WEB] Image Details Page is online available (5/30/14)
  • [WEB] Images associate to publications and markers are online displaying at CottonGen¬†(4/25/14)
  • [DATA] Marker gel images (52) and FISH images (10) from publications were transferred from CottonDB to CottonGen (4/25/14)
  • [WEB] CottonGen Employment page is available for posting job positions (4/10/14)
  • [DATA] 12,867 trait scores from phenotyping data of TM-1/NM24016 RIL population (95 progenies and 2 parents, 9 traits, 2 yr, 2 loc, 4 rep): were loaded in chado. (3/31/14)
  • [DATA] 38,024 allele scores from genotyping data of TM-1/NM24016 RIL population (95 progenies and 2 parents, 392 SSRs) were loaded in chado. (3/31/14)
  • [DATA] 95 progenies from TM-1/NM24016 RIL population were added into CottonGen drupal chado germplasm/stock table. (3/5/14)
  • [DATA] 1,129 new HAU SSR marker primers have been loaded into chado (2/15/2014)
  • [ICGI] Initiated ICGI 2014 Research Conference Home Page, Conference Registrations, and Abstract Submission (2/10/2014)