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-- CottonGen Unigene v1.0 (149,916)
Human-Readable Name
-- CottonGen Unigene v1.0 (149,916)
Database Path
/mainlab/web/temp/db/cottongen/ctg_unigene
Database Type
nucleotide
FASTA Header Format
custom
External Database
CottonGen Database
RegEx
/^gnl\|cottongen\|unigene-v1.0_(\S+).*/
Link-out Type
link
-- TAMU SNP63K array (69997)
Human-Readable Name
-- TAMU SNP63K array (69997)
Database Path
/mainlab/web/temp/db/cottongen/array_tamu63k
Database Type
nucleotide
FASTA Header Format
default
External Database
CottonGen Database
RegEx
/^(\S+).*/
Link-out Type
link
-- CottonGen RFLP (3,451) and RAD (3,984)
Human-Readable Name
-- CottonGen RFLP (3,451) and RAD (3,984)
Database Path
/mainlab/web/temp/db/cottongen/ctg_rflp_rad
Database Type
nucleotide
-- CottonGen SSR Cleaned (72,339)
Human-Readable Name
-- CottonGen SSR Cleaned (72,339)
Database Path
/mainlab/web/temp/db/cottongen/ctg_ssr
Database Type
nucleotide
FASTA Header Format
custom
External Database
CottonGen Database
RegEx
/^gnl\|ctg_ssr\|(\S+).*/
Link-out Type
link
-- CottonGen InDel (405) and SNP (442,404)
Human-Readable Name
-- CottonGen InDel (405) and SNP (442,404)
Database Path
/mainlab/web/temp/db/cottongen/ctg_indel_snp
Database Type
nucleotide
FASTA Header Format
custom
External Database
CottonGen Database
RegEx
/^gnl\|ctg_snp\|(\S+).*/
Link-out Type
link
-- Gossypium GenBank GSS Sequences (273,255)
Human-Readable Name
-- Gossypium GenBank GSS Sequences (273,255)
Database Path
/mainlab/web/temp/db/cottongen/gb_gss
Database Type
nucleotide
FASTA Header Format
genbank
External Database
CottonGen Database
RegEx
/^gb\|([^\|])*\|.*/
Link-out Type
link
-- Gossypium GenBank EST Sequences (505,548)
Human-Readable Name
-- Gossypium GenBank EST Sequences (505,548)
Database Path
/mainlab/web/temp/db/cottongen/gb_est
Database Type
nucleotide
FASTA Header Format
custom
External Database
Genbank
RegEx
/^gi\|\S+\|gb\|\S+\|(\S+)*/
Link-out Type
link
-- Gossypium GenBank Core Nucleotide Sequences (374,992)
Human-Readable Name
-- Gossypium GenBank Core Nucleotide Sequences (374,992)
Database Path
/mainlab/web/temp/db/cottongen/gb_nt
Database Type
nucleotide
FASTA Header Format
genbank
External Database
DB:genbank
RegEx
/^gb\|([^\|])*\|.*/
Link-out Type
link
-- G. raimondii JGI proteins (77,267)
Human-Readable Name
-- G. raimondii JGI proteins (77,267)
Database Path
/mainlab/web/temp/db/cottongen/G.raimondii_JGI_221_v2.1.proteins.fasta
Database Type
protein
FASTA Header Format
default
External Database
CottonGen Database
RegEx
/^(\S+).*/
Link-out Type
link
-- G. raimondii BGI proteins (40,976)
Human-Readable Name
-- G. raimondii BGI proteins (40,976)
Database Path
/mainlab/web/temp/db/cottongen/G.raimondii_BGI-CGP_v1.0_protein.fasta
Database Type
protein
FASTA Header Format
default
External Database
CottonGen Database
RegEx
/^(\S+).*/
Link-out Type
link
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