Cotton Cluster File Request

Submitted by Anonymous (not verified) on Sat, 01/25/2020 - 21:04
Name: 
Anya Coane
Email Address: 
4 Rue Pierre De Coubertin
Email Address: 
4 Rue Pierre De Coubertin
Organization: 
Anya from the www.herveleger.best blog & Anya Consulting
Acknowledgement: 
0
Acknowledgement4: 
0

G. darwinii HGS_v1.1 Genome (26 chrom. and 308 scaffolds)

Human-Readable NameG. darwinii HGS_v1.1 Genome (26 chrom. and 308 scaffolds)
Database Path/mainlab/web/temp/db/cottongen/G.darwinii_AD5_HGS_v1.1_genome.fasta
Database Typenucleotide
FASTA Header Formatdefault
External DatabaseJBrowse for AD5_HGS_v1.1
RegEx/^(\S+).*/
Link-out Typejbrowse

-- G. darwinii HGS_v1.1 CDs (97,407)

Human-Readable Name-- G. darwinii HGS_v1.1 CDs (97,407)
Database Path/mainlab/web/temp/db/cottongen/G.darwinii_AD5_HGS_v1.1.cds.fas
Database Typenucleotide
FASTA Header Formatdefault
External DatabaseJBrowse for AD5_HGS_v1.1
RegEx/^(\S+).*/
Link-out Typejbrowse

-- G. darwinii HGS_v1.1 proteins (97,407)

Human-Readable Name-- G. darwinii HGS_v1.1 proteins (97,407)
Database Path/mainlab/web/temp/db/cottongen/G.darwinii_AD5_HGS_v1.1.pep.faa
Database Typeprotein
FASTA Header Formatdefault
External DatabaseCottonGen Database
RegEx/^(\S+).*/
Link-out Typelink

G. tomentosum HGS_v1.1 Genome (26 chrom. and 293 scaffolds)

Human-Readable NameG. tomentosum HGS_v1.1 Genome (26 chrom. and 293 scaffolds)
Database Path/mainlab/web/temp/db/cottongen/G.tomentosum_AD3_HGS_v1.1_genome.fasta
Database Typenucleotide
FASTA Header Formatdefault
External DatabaseJBrowse for AD3_HGS_v1.1
RegEx/^(\S+).*/
Link-out Typejbrowse

-- G. tomentosum HGS_v1.1 CDs (112,713)

Human-Readable Name-- G. tomentosum HGS_v1.1 CDs (112,713)
Database Path/mainlab/web/temp/db/cottongen/G.tomentosum_AD3_HGS_v1.1.cds.fas
Database Typenucleotide
FASTA Header Formatdefault
External DatabaseJBrowse for AD3_HGS_v1.1
RegEx/^(\S+).*/
Link-out Typejbrowse

-- G. tomentosum HGS_v1.1 proteins

Human-Readable Name-- G. tomentosum HGS_v1.1 proteins
Database Path/mainlab/web/temp/db/cottongen/G.tomentosum_AD3_HGS_v1.1.pep.faa
Database Typeprotein
FASTA Header Formatdefault
External DatabaseJBrowse for AD3_HGS_v1.1
RegEx/^(\S+).*/
Link-out Typejbrowse

6425 biotic stress trait scores from RBTN available (12/17/19)

6425 new trait scores of biotic stress (fusarium wilt, target leaf spot, bacterial blight, tarnished plant bug, tobacco budworm) and morphological traits from RBTN (US Regional Breeders Testing Network) added.  These data can be browsed from Search Trait Descriptors and searchable from Search Trait Evaluation.

G. barbadense HGS_v1.1 Genome (26 chrom. and 4,748 scaffolds)

Human-Readable NameG. barbadense HGS_v1.1 Genome (26 chrom. and 4,748 scaffolds)
Database Path/mainlab/web/temp/db/cottongen/G.barbadense_HGS-AD2_v1.1_genome.fasta
Database Typenucleotide
FASTA Header Formatdefault
External DatabaseJBrowse for AD2_HGS_v1.1
RegEx/^(\S+).*/
Link-out Typejbrowse