Homology
BLAST of Gar10G07970 vs. ExPASy TrEMBL
Match:
A0A2P5SRZ2_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD01106 PE=4 SV=1)
HSP 1 Score: 84.7297 bits (208), Expect = 9.792e-18
Identity = 54/133 (40.60%), Postives = 63/133 (47.37%), Query Frame = 0
Query: 51 DRQAFPSFLVLLWQLWEARDMTVIQGHVS--------------------------------------------KINVDVVWNMESRTATYGAIFYDHERIMLVGFTGMIGKAFDAPLVEALFLYCVAQKAIEK 139
D+ AF SFLVLLWQ+WEAR++ VIQG VS KINVDV N E R A G I DHE ++LVGF+ KAFD+P EAL L C QKA +K
Sbjct: 2 DKGAFTSFLVLLWQMWEARNLFVIQGRVSSFQDAILKALPIHPDFRVHNLLYTPLLPRRLTVVRWTPPYEDEVKINVDVALNEEMRFAFCGVIVRDHEGMVLVGFSYSFTKAFDSPSAEALALACATQKAFKK 134
BLAST of Gar10G07970 vs. ExPASy TrEMBL
Match:
A0A1U8MDR8_GOSHI (uncharacterized protein LOC107936687 OS=Gossypium hirsutum OX=3635 GN=LOC107936687 PE=4 SV=1)
HSP 1 Score: 82.8037 bits (203), Expect = 3.354e-17
Identity = 54/139 (38.85%), Postives = 64/139 (46.04%), Query Frame = 0
Query: 51 DRQAFPSFLVLLWQLWEARDMTVIQGHVS--------------------------------------------KINVDVVWNMESRTATYGAIFYDHERIMLVGFTGMIGKAFDAPLVEALFLYCVAQKAIEKDRTDVL 145
D+ AF SFLVLLWQ+WEAR++ VIQG VS KINVDV N E R A G I DHE +++VGF+ KAFDAP EAL L C QKA + +V
Sbjct: 2 DKGAFTSFLVLLWQMWEARNLFVIQGRVSSFQDAILKALPIHPDFRVHNLLYTPLLPRRLTVVRWTPPYEDEVKINVDVALNEEMRFAFCGVIVRDHEGMVIVGFSYSFTKAFDAPSAEALALACATQKASRRAFPEVF 140
BLAST of Gar10G07970 vs. ExPASy TrEMBL
Match:
A0A2P5S0F5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD10567 PE=4 SV=1)
HSP 1 Score: 71.2478 bits (173), Expect = 2.095e-13
Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 0
Query: 80 KINVDVVWNMESRTATYGAIFYDHERIMLVGFTGMIGKAFDAPLVEALFLYCVAQKAIEKD 140
KINVD WN R+A GAI +DHE I++ GFT I +AFDAP EAL L+C +KA+ K+
Sbjct: 2 KINVDAAWNANMRSAFCGAIVHDHEGIVIAGFTCSIVEAFDAPSAEALTLFCATKKALNKE 62
BLAST of Gar10G07970 vs. ExPASy TrEMBL
Match:
A0A2P5Q0N7_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD34999 PE=4 SV=1)
HSP 1 Score: 70.0922 bits (170), Expect = 4.193e-13
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 0
Query: 51 DRQAFPSFLVLLWQLWEARDMTVIQGHVSKINVDVVWNMESRTATYGAIFYDHERIMLVGFTGMIGKAFDAPLVEALFLYCVA 133
D++AF SFL+LLWQLWEAR++ VIQG +++ A+ GAI DHE ++L + I +AFDAP +A+ C A
Sbjct: 5 DKRAFTSFLMLLWQLWEARNLFVIQG-------------QTKVASSGAIVRDHEGMVLADYACSITEAFDAPSAKAIASACTA 74
BLAST of Gar10G07970 vs. ExPASy TrEMBL
Match:
A0A2P5SFP9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD05163 PE=4 SV=1)
HSP 1 Score: 68.9366 bits (167), Expect = 6.438e-12
Identity = 53/149 (35.57%), Postives = 74/149 (49.66%), Query Frame = 0
Query: 12 RRPSWGRPILNIATA----GLRR-PRCRVPKEDCDQLARIDYDED-----RQAFPSF-----LVLLWQLWEARDMTVIQGHVSKINVDVVWNMESRTATYGAIFYDHERIMLVGFTGMIGKAFDAPLVEALFLYCVAQKAIEKDRTDVL 145
R + RP+++ +T GLRR P ++ E+ DQ R + +D R + SF +L W L H +NVD WN E R GAI DH+ ++L GFT +I +AF AP VE L L C QKA+EK + V+
Sbjct: 4 RSKNEERPLVSSSTGDDEDGLRRQPSKQIGGEERDQ-GRDVFSQDVVLRARSSIMSFGCITSFMLHWYL---------DVHALIVNVDAAWNAEMRFVACGAIVCDHDGMVLAGFTCLIVEAFHAPSVETLTLACATQKALEKGFSRVV 142
BLAST of Gar10G07970 vs. ExPASy TrEMBL
Match:
A0A2P5Q6Y9_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD32819 PE=4 SV=1)
HSP 1 Score: 63.929 bits (154), Expect = 1.750e-10
Identity = 32/67 (47.76%), Postives = 40/67 (59.70%), Query Frame = 0
Query: 76 GHVSKINV--DVVWNMESRTATYGAIFYDHERIMLVGFTGMIGKAFDAPLVEALFLYCVAQKAIEKD 140
GH S + WN ++R AT G I +DHE ++L GFT I +AF PL EA+ L C QKAIEK
Sbjct: 7 GHASGASFFPSRSWNAKTRCATCGGIVHDHEGLVLAGFTYSIAEAFGTPLAEAVALACAVQKAIEKG 73
BLAST of Gar10G07970 vs. ExPASy TrEMBL
Match:
A0A2P5Y2A6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA10933 PE=4 SV=1)
HSP 1 Score: 63.929 bits (154), Expect = 2.032e-9
Identity = 30/64 (46.88%), Postives = 40/64 (62.50%), Query Frame = 0
Query: 87 WNMESRTATYGAIFYDHERIMLVGFTGMIGKAFDAPLVEALFLYCVAQKAIEKDRTDVLDFGLD 150
WN+E+R+AT AI +DHE ++L GFT I +AF L EA+ L C QKA EK + + LD
Sbjct: 20 WNVETRSATCEAIVHDHEGLVLAGFTCSIAEAFGTSLAEAVALACAVQKAFEKKKKEYPRVELD 83
BLAST of Gar10G07970 vs. ExPASy TrEMBL
Match:
A0A2P5XZH6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA11883 PE=4 SV=1)
HSP 1 Score: 56.6102 bits (135), Expect = 3.692e-7
Identity = 29/66 (43.94%), Postives = 42/66 (63.64%), Query Frame = 0
Query: 80 KINVDVVWNMESRTATYGAIFYDHERIMLVGFTGMIGKAFDAPLVEALFLYCVAQKAIEKDRTDVL 145
KINVDVV N ++ A Y + + HE +++V T I +AFDA EAL L+C +KA+EK + V+
Sbjct: 60 KINVDVVGNAKTSFAYYDVVVHGHEGMVIVKLTFSIVEAFDAHSTEALSLFCATKKALEKSFSKVV 125
BLAST of Gar10G07970 vs. NCBI nr
Match:
gi|1344119606|gb|PPD92509.1| (hypothetical protein GOBAR_DD10567 [Gossypium barbadense])
HSP 1 Score: 71.2478 bits (173), Expect = 2.494e-13
Identity = 33/61 (54.10%), Postives = 42/61 (68.85%), Query Frame = 0
Query: 80 KINVDVVWNMESRTATYGAIFYDHERIMLVGFTGMIGKAFDAPLVEALFLYCVAQKAIEKD 140
KINVD WN R+A GAI +DHE I++ GFT I +AFDAP EAL L+C +KA+ K+
Sbjct: 2 KINVDAAWNANMRSAFCGAIVHDHEGIVIAGFTCSIVEAFDAPSAEALTLFCATKKALNKE 62
BLAST of Gar10G07970 vs. NCBI nr
Match:
gi|1344092226|gb|PPD68122.1| (hypothetical protein GOBAR_DD34999 [Gossypium barbadense])
HSP 1 Score: 70.0922 bits (170), Expect = 4.992e-13
Identity = 36/83 (43.37%), Postives = 51/83 (61.45%), Query Frame = 0
Query: 51 DRQAFPSFLVLLWQLWEARDMTVIQGHVSKINVDVVWNMESRTATYGAIFYDHERIMLVGFTGMIGKAFDAPLVEALFLYCVA 133
D++AF SFL+LLWQLWEAR++ VIQG +++ A+ GAI DHE ++L + I +AFDAP +A+ C A
Sbjct: 5 DKRAFTSFLMLLWQLWEARNLFVIQG-------------QTKVASSGAIVRDHEGMVLADYACSITEAFDAPSAKAIASACTA 74
BLAST of Gar10G07970 vs. NCBI nr
Match:
gi|1344125270|gb|PPD97821.1| (hypothetical protein GOBAR_DD05163 [Gossypium barbadense])
HSP 1 Score: 68.9366 bits (167), Expect = 7.664e-12
Identity = 53/149 (35.57%), Postives = 74/149 (49.66%), Query Frame = 0
Query: 12 RRPSWGRPILNIATA----GLRR-PRCRVPKEDCDQLARIDYDED-----RQAFPSF-----LVLLWQLWEARDMTVIQGHVSKINVDVVWNMESRTATYGAIFYDHERIMLVGFTGMIGKAFDAPLVEALFLYCVAQKAIEKDRTDVL 145
R + RP+++ +T GLRR P ++ E+ DQ R + +D R + SF +L W L H +NVD WN E R GAI DH+ ++L GFT +I +AF AP VE L L C QKA+EK + V+
Sbjct: 4 RSKNEERPLVSSSTGDDEDGLRRQPSKQIGGEERDQ-GRDVFSQDVVLRARSSIMSFGCITSFMLHWYL---------DVHALIVNVDAAWNAEMRFVACGAIVCDHDGMVLAGFTCLIVEAFHAPSVETLTLACATQKALEKGFSRVV 142
BLAST of Gar10G07970 vs. NCBI nr
Match:
gi|1344094929|gb|PPD70302.1| (hypothetical protein GOBAR_DD32819 [Gossypium barbadense])
HSP 1 Score: 63.929 bits (154), Expect = 2.083e-10
Identity = 32/67 (47.76%), Postives = 40/67 (59.70%), Query Frame = 0
Query: 76 GHVSKINV--DVVWNMESRTATYGAIFYDHERIMLVGFTGMIGKAFDAPLVEALFLYCVAQKAIEKD 140
GH S + WN ++R AT G I +DHE ++L GFT I +AF PL EA+ L C QKAIEK
Sbjct: 7 GHASGASFFPSRSWNAKTRCATCGGIVHDHEGLVLAGFTYSIAEAFGTPLAEAVALACAVQKAIEKG 73
The following BLAST results are available for this feature:
Sequences
The
following sequences are available for this feature:
mRNA sequence
>Gar10G07970_WHU-A2_v1 ID=Gar10G07970_WHU-A2_v1; Name=Gar10G07970; organism=Gossypium arboreum; type=mRNA; length=495bp
ATGGCATGCCATAGTCGTATAGTTGAATGTGTTAGACGCCCTAGCTGGGG
AAGACCAATTCTCAACATTGCTACAGCAGGCCTTAGGCGTCCTAGGTGTA
GGGTGCCCAAGGAGGATTGTGATCAATTGGCTAGAATCGACTATGATGAA
GATAGACAAGCGTTTCCTAGCTTTCTAGTGCTTCTTTGGCAACTATGGGA
GGCTAGGGATATGACTGTGATCCAAGGACATGTTTCCAAAATCAATGTTG
ACGTGGTATGGAACATGGAGTCGAGAACTGCTACTTATGGTGCTATTTTT
TATGACCATGAGAGGATAATGCTTGTCGGCTTCACTGGCATGATTGGTAA
GGCTTTTGATGCTCCTTTGGTTGAGGCTCTTTTTTTGTATTGTGTTGCTC
AAAAGGCCATTGAAAAAGATAGGACCGATGTCCTTGATTTTGGTTTGGAC
TATCCGAATTTCATACACCAATTGGTGTTGGATGATATTTCTTAA
back to topprotein sequence of Gar10G07970_WHU-A2_v1
>Gar10G07970_WHU-A2_v1 ID=Gar10G07970_WHU-A2_v1; Name=Gar10G07970_WHU-A2_v1; organism=Gossypium arboreum; type=polypeptide; length=164bp
MACHSRIVECVRRPSWGRPILNIATAGLRRPRCRVPKEDCDQLARIDYDE
DRQAFPSFLVLLWQLWEARDMTVIQGHVSKINVDVVWNMESRTATYGAIF
YDHERIMLVGFTGMIGKAFDAPLVEALFLYCVAQKAIEKDRTDVLDFGLD
YPNFIHQLVLDDIS
back to topmRNA from alignment at Chr10:10143890..10145314-
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>Gar10G07970_WHU-A2_v1 ID=Gar10G07970_WHU-A2_v1; Name=Gar10G07970; organism=Gossypium arboreum; type=mRNA; length=1425bp; location=Sequence derived from: Chr10:10143890..10145314- (Gossypium arboreum
ATGGCATGCCATAGTCGTATAGTTGAATGTGTTAGACGCCCTAGCTGGGG
AAGACCAATTCTCAACATTGCTACGTGAGTCTCGATAACAACTTGTGAAA
GGTAACCCACTTCTAAATAAAGAAGGTAAAGTAGACTTCCTTTTTAGCAA
GCACCTTTGCATAAGCTAGATTTGATACACCAATATATTTTAAGAAGATA
ATTAACCATAAACCATTGTGATTTCTAAGGATGTCACCAATCTTAGTGGG
TTCGAAAATTCCTCTTATTACCCTATTGATTGAATTTTCCTTTGATTTAG
TCTTATATGGGATGATGATATAACCAACCAGATTGCCTAACTTCTTATAA
GAAATGCCTTAGCTGGTGATGTTTTTGCATGGGGACATGCACTGAATAAT
GTCTATTCCACTAAATCGTGCTTTAATTGGCTGCTTTTAAATTCCTTAAG
GATGGGTCCCCATAGGGTTTTTTGGAAGGAAATTTAAAGGTTGAGGACTC
TTCCCAATATTTGACTTTTTAGATGGAGACTTGGCCATAGCATTCACCAT
ACAACTGAGAGATGTGTCATGTTTATTATTAGAGCAGGCCTTAGGCGTCC
TAGGTGTAGGGTGCCCAAGGAGGATGTTTTGCATGCTCTAGGGATTGTTC
TATATTGAGAGATGCTCTGACCCTTTGTAGTATTAATAATGATGTGCTTT
CTTTGTCTTTTTGTAGTGTGATCAATTGGCTAGAATCGACTATGATGAAG
ATAGACAAGCGTTTCCTAGCTTTCTAGTGCTTCTTTGGCAACTATGGGAG
GCTAGGGATATGACTGTGATCCAAGGACGTGATGTCTCTTCTTAGGACGT
GGTTTTACGTGCTTAGCCCATATCACCATAACTTTAGGGTGCATAACCTT
TTGTTCGCACTGATGTTACCTAAACGTTCGATCATTGCTTGGTGAATTCT
ATCTTGTGAAGATGTTTCCAAAATCAATGTTGACGTGGTATGGAACATGG
AGTCGAGAACTGCTACTTATGGTGCTATTTTTTATGACCATGAGAGGATA
ATGCTTGTCGGCTTCACTGGCATGATTGGTAAGGCTTTTGATGCTCCTTT
GGTTGAGGCTCTTTTTTTGTATTGTGTTGCTCAAAAGGCCATTGAAAAAG
GTTTTTCTAGAGATGTTATAAAGTCAAATTGAACTTTTATTATAAACAAG
TTTAATAGTCGTGCTCTAGATTTATCTTTCTATGGTTGTATTGTTAGGCA
GATCTTAGCTTTTTATGAGTCGTTTGTTGATGTTAGTTTCTCTTCTACCT
GTAAATTAGCGAATTGTGTTTCTCATTGTTTGGCACATTGGTTGATAGAT
AGGACCGATGTCCTTGATTTTGGTTTGGACTATCCGAATTTCATACACCA
ATTGGTGTTGGATGATATTTCTTAA
back to topCoding sequence (CDS) from alignment at Chr10:10143890..10145314-
>Gar10G07970_WHU-A2_v1 ID=Gar10G07970_WHU-A2_v1; Name=Gar10G07970; organism=Gossypium arboreum; type=CDS; length=495bp; location=Sequence derived from: Chr10:10143890..10145314- (Gossypium arboreum
ATGGCATGCCATAGTCGTATAGTTGAATGTGTTAGACGCCCTAGCTGGGG
AAGACCAATTCTCAACATTGCTACAGCAGGCCTTAGGCGTCCTAGGTGTA
GGGTGCCCAAGGAGGATTGTGATCAATTGGCTAGAATCGACTATGATGAA
GATAGACAAGCGTTTCCTAGCTTTCTAGTGCTTCTTTGGCAACTATGGGA
GGCTAGGGATATGACTGTGATCCAAGGACATGTTTCCAAAATCAATGTTG
ACGTGGTATGGAACATGGAGTCGAGAACTGCTACTTATGGTGCTATTTTT
TATGACCATGAGAGGATAATGCTTGTCGGCTTCACTGGCATGATTGGTAA
GGCTTTTGATGCTCCTTTGGTTGAGGCTCTTTTTTTGTATTGTGTTGCTC
AAAAGGCCATTGAAAAAGATAGGACCGATGTCCTTGATTTTGGTTTGGAC
TATCCGAATTTCATACACCAATTGGTGTTGGATGATATTTCTTAA
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