Ghe11G37820, Ghe11G37820_WHU-A1_v1 (mRNA) Gossypium herbaceum
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Transcript Overview
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Orthologs
Syntenic blocks Orthologs Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Homology
BLAST of Ghe11G37820 vs. Araport11
Match: gnl|BL_ORD_ID|36462 (AT4G36150.1 | Disease resistance protein (TIR-NBS-LRR class) family | Chr4:17104776-17108711 FORWARD LENGTH=1179 | 201606) HSP 1 Score: 50.8322 bits (120), Expect = 6.767e-7 Identity = 48/176 (27.27%), Postives = 74/176 (42.05%), Query Frame = 0
Query: 23 GNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREARWGICIFPP---EEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQELELSFEVGICIASVKVKKCGARLVYE 195
G S +F PGS+ P WF+ Q S++++ LP W D++ + LC + D +E+ NR+S + C N G R + C E + + DH+FI Y S + KH G + C+ E + FEV + ++ CG LVYE
Sbjct: 967 GVSEALFIACFPGSDVPSWFNYQTFGSALRLKLPPH-WCDNRLSTIALCAVVTFPDTQ--DEI-------NRFSIECTCEFKNELGTCIRFS----CTLGGSWIESRKIDSDHVFIGYTSSSHIT----KHLEGSLKLKE--HDKCVPTEASIEFEV--IDGAGEIVNCGLSLVYE 1120
BLAST of Ghe11G37820 vs. NCBI nr
Match: gi|1029054515|ref|XP_016752354.1| (PREDICTED: disease resistance protein TAO1-like [Gossypium hirsutum]) HSP 1 Score: 471.47 bits (1212), Expect = 8.245e-163 Identity = 223/229 (97.38%), Postives = 226/229 (98.69%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREARWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQELELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENIDALTLLKNHLKVFGNSREV DIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREARWGICIFPPEEQPVMKDHIFIRYFSR+ELYQISLKHKCGGCETDNLWATDCLDQE ELSFEVGICIASVKVKKCGARLVYERDLEEMEQI+ELHSSQCCANFEDIQQYSDDVGSIGN +
Sbjct: 294 LAENIDALTLLKNHLKVFGNSREVSDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREARWGICIFPPEEQPVMKDHIFIRYFSRDELYQISLKHKCGGCETDNLWATDCLDQEHELSFEVGICIASVKVKKCGARLVYERDLEEMEQIKELHSSQCCANFEDIQQYSDDVGSIGNGS 522
BLAST of Ghe11G37820 vs. NCBI nr
Match: gi|1029053589|ref|XP_016744996.1| (PREDICTED: TMV resistance protein N-like, partial [Gossypium hirsutum]) HSP 1 Score: 328.561 bits (841), Expect = 5.678e-106 Identity = 168/231 (72.73%), Postives = 187/231 (80.95%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREA-RWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGN 231
LAENI+ALTLL+ HLKVFGNSR++FD+++PGSE PEWFSQQR +S IKIDLPLEV NDSQWMGV LCCIFVSDD SR E L+C AVIH+RYSRQAN TQSNFQGRNPRE R G + EQPVMKDHIF+RYFSR LY ISL+ KC ET+NLW TDCL+QE LELSF SV KKCG R+VY+RDLEEMEQI+ELHSSQCCANFEDIQQ+ D GSIGN
Sbjct: 330 LAENINALTLLRKHLKVFGNSRKLFDVVIPGSEIPEWFSQQRGESWIKIDLPLEVRNDSQWMGVALCCIFVSDDTSRNEHLICRAVIHDRYSRQANRTQSNFQGRNPREVIRSGWNVNRHFEQPVMKDHIFVRYFSRGMLYLISLEDKCDERETNNLWITDCLEQECDQLELSFTGP---YSVNAKKCGVRIVYKRDLEEMEQIKELHSSQCCANFEDIQQHFADDGSIGN 557
BLAST of Ghe11G37820 vs. NCBI nr
Match: gi|1344101033|gb|PPD75502.1| (hypothetical protein GOBAR_DD27582 [Gossypium barbadense]) HSP 1 Score: 330.872 bits (847), Expect = 8.620e-103 Identity = 170/231 (73.59%), Postives = 186/231 (80.52%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREA-RWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGN 231
LAENIDALTLLK HLKVFGNSR++FD+I+PGSE PEWFSQQR DS IKIDLPLEV NDSQWMG+ LCC+FVSDD SR E L+C AVIH+RYSRQAN TQSNFQGRNPRE R G + EQPVMKDHIF+RYFSR LY ISL+ KC ET+NLW TD LDQE LELSF SV KKCG R+VY+RDLEEMEQI+ELHSSQCCANFEDIQQ+S D GSI N
Sbjct: 743 LAENIDALTLLKKHLKVFGNSRKLFDVIIPGSEIPEWFSQQRGDSWIKIDLPLEVRNDSQWMGLALCCVFVSDDTSRNEHLICRAVIHDRYSRQANRTQSNFQGRNPREVIRSGWNVNRHFEQPVMKDHIFVRYFSRGMLYPISLEDKCDERETNNLWITDSLDQECDQLELSF---TGPYSVNAKKCGVRIVYKRDLEEMEQIKELHSSQCCANFEDIQQHSADDGSIDN 970
BLAST of Ghe11G37820 vs. NCBI nr
Match: gi|1029139051|ref|XP_016747569.1| (PREDICTED: TMV resistance protein N-like [Gossypium hirsutum]) HSP 1 Score: 334.724 bits (857), Expect = 7.441e-102 Identity = 172/233 (73.82%), Postives = 187/233 (80.26%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREARW-GICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENIDALTLLK HLKVFGNS+++F II+PGSE PEW SQQR +SSIKIDLPLEV NDSQWMGV LCCIFVSDDASR E LMC AVIH RYSRQANC+QSNFQGR PR+ W G + EQ VMKDHI IRYFSR++LY ISL+ KCG ET+NLW TDCLDQE LELSF IC SVKVKKCG R+VYERDLEE Q LHSSQCCANFEDIQQ+S D GSIG +
Sbjct: 1247 LAENIDALTLLKKHLKVFGNSKKIFTIIIPGSEMPEWISQQRGESSIKIDLPLEVRNDSQWMGVALCCIFVSDDASRDERLMCRAVIHGRYSRQANCSQSNFQGRVPRQVDWSGYTVNDHFEQHVMKDHILIRYFSRDKLYPISLEDKCGVHETNNLWTTDCLDQECHQLELSFTDFIC-NSVKVKKCGVRIVYERDLEET---QVLHSSQCCANFEDIQQHSADDGSIGKGS 1475
BLAST of Ghe11G37820 vs. NCBI nr
Match: gi|1347690099|gb|PPR91335.1| (hypothetical protein GOBAR_AA29349 [Gossypium barbadense]) HSP 1 Score: 330.872 bits (847), Expect = 1.144e-100 Identity = 169/235 (71.91%), Postives = 189/235 (80.43%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNP---REARWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENIDALTLLK HLKVFGNSR++FDII+PGSE PEWFSQQ +S IKIDLPLEV NDSQWMGV LCCIFVSDDASR E+LMC AVIH YSRQANCTQSNFQGRNP + W + EQPVMKDHI IRYFSR++LY +SL+ G ET+NLW TDCLDQE LELSF SV+VKKCG R++YERDLE++EQI+ELHSSQCCANFEDIQQ+SDD GSIG +
Sbjct: 1205 LAENIDALTLLKKHLKVFGNSRKIFDIIIPGSEMPEWFSQQGGESWIKIDLPLEVRNDSQWMGVALCCIFVSDDASRDEDLMCRAVIHGGYSRQANCTQSNFQGRNPLPVDSSGWNVNYH--FEQPVMKDHILIRYFSRDKLYPVSLEENFGERETNNLWTTDCLDQECHQLELSFTDP---RSVEVKKCGVRIMYERDLEDIEQIKELHSSQCCANFEDIQQHSDDDGSIGKGS 1434
BLAST of Ghe11G37820 vs. NCBI nr
Match: gi|823181011|ref|XP_012488074.1| (PREDICTED: protein SUPPRESSOR OF npr1-1, CONSTITUTIVE 1-like [Gossypium raimondii]) HSP 1 Score: 325.094 bits (832), Expect = 2.801e-100 Identity = 167/235 (71.06%), Postives = 188/235 (80.00%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPRE---ARWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENI+ALTLLK HLKVFGNSR++FDII+PGSE PEWFSQ R SIKIDLPLEV ND QWMGV LCCIFVSDDASR EELMC AVIH RYSRQANCTQSNFQ R+ R + W + E+PVMKDHI IRY SR++LY ISL+ KCG ET+N W T CLDQE LELSFE + + SVKVKKCG R+VYERDLEE+EQIQEL +S+CCANF+DIQQ+S D GSIGN +
Sbjct: 800 LAENINALTLLKKHLKVFGNSRKLFDIILPGSEMPEWFSQLRGGPSIKIDLPLEVRNDWQWMGVSLCCIFVSDDASRNEELMCRAVIHGRYSRQANCTQSNFQDRDGRYVDCSGWDVDYH--FERPVMKDHILIRYLSRDKLYPISLEDKCGERETNNFWTTGCLDQECHQLELSFESPL-VVSVKVKKCGVRIVYERDLEELEQIQELRNSKCCANFDDIQQHSADDGSIGNGS 1031
BLAST of Ghe11G37820 vs. NCBI nr
Match: gi|823198059|ref|XP_012434476.1| (PREDICTED: TMV resistance protein N-like isoform X1 [Gossypium raimondii] >gi|823198062|ref|XP_012434479.1| PREDICTED: TMV resistance protein N-like isoform X2 [Gossypium raimondii] >gi|823198065|ref|XP_012434480.1| PREDICTED: TMV resistance protein N-like isoform X2 [Gossypium raimondii]) HSP 1 Score: 327.405 bits (838), Expect = 6.610e-100 Identity = 170/235 (72.34%), Postives = 188/235 (80.00%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPRE---ARWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENI+ALTLLK HLKVFGNSR++FDII+PGSE PEWFSQ R SIKIDLPLEV ND QWMGV LCCIFVSDDASR EELMC AVIH RYSRQANCTQSNFQ R+ R + W + E+PVMKDHI IRYFSR++LY I L+ KCG ET+N W T CLDQE LELSFE SVKVKKCG R+VYERDLEEMEQIQELHSS+CCANFEDI+Q+S D GSIGN++
Sbjct: 1050 LAENINALTLLKKHLKVFGNSRKLFDIILPGSEMPEWFSQLRGGPSIKIDLPLEVRNDCQWMGVSLCCIFVSDDASRNEELMCRAVIHGRYSRQANCTQSNFQDRDGRYVDCSGWDVDYHF--ERPVMKDHILIRYFSRDKLYPIYLEDKCGERETNNFWTTGCLDQECHQLELSFERP---NSVKVKKCGVRIVYERDLEEMEQIQELHSSKCCANFEDIRQHSADDGSIGNSS 1279
BLAST of Ghe11G37820 vs. NCBI nr
Match: gi|1050613107|ref|XP_017629324.1| (PREDICTED: TMV resistance protein N-like [Gossypium arboreum]) HSP 1 Score: 324.324 bits (830), Expect = 5.922e-99 Identity = 167/231 (72.29%), Postives = 187/231 (80.95%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREA-RWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGN 231
LAENI+ALTLL+ HLKVFGNSR++FD+++PGSE PEWFSQQR +S IKIDLPLEV NDSQWMGV LCCIFVSDD SR E L+C AVIH+RYSRQAN +QSNFQGRNPRE R G + EQ VMKDHIF+RYFSR+ LY ISL+ KC ET+NL TDCLDQE LELSF SV KKCG R+VY+RDLEEMEQI+ELHSSQCCANFEDIQQ+S D GSIGN
Sbjct: 997 LAENINALTLLRKHLKVFGNSRKLFDVVIPGSEIPEWFSQQRAESWIKIDLPLEVRNDSQWMGVALCCIFVSDDTSRNEHLICRAVIHDRYSRQANRSQSNFQGRNPREVIRSGWNVNRHFEQAVMKDHIFVRYFSRDMLYPISLEDKCDERETNNLCITDCLDQECDQLELSFTGP---YSVNAKKCGVRIVYKRDLEEMEQIKELHSSQCCANFEDIQQHSADDGSIGN 1224
BLAST of Ghe11G37820 vs. NCBI nr
Match: gi|1029059676|ref|XP_016684327.1| (PREDICTED: disease resistance protein RPS4-like [Gossypium hirsutum]) HSP 1 Score: 300.056 bits (767), Expect = 1.262e-98 Identity = 159/232 (68.53%), Postives = 175/232 (75.43%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREARWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQ---ELELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENIDALTLLK HLKVFGNS ++F+ I+PGSE PEWFSQQR DSSIKIDLPLEVWND+QWMG+ LCCIFV DDASRAEEL+ AV SNF+GRNPR GI F P+E PVMKDHIFIRYFSR+E+Y+ NLW TD LDQ ELELSF G C+ SVKVKKCG RLVYERDLEEMEQIQELHSSQCC NFEDIQQ+ D GSIGN++
Sbjct: 94 LAENIDALTLLKKHLKVFGNSGKMFNFILPGSEIPEWFSQQRGDSSIKIDLPLEVWNDNQWMGIALCCIFVRDDASRAEELVFRAVY----------GLSNFKGRNPRGFMRGIWTFSPDE-PVMKDHIFIRYFSRDEMYR-------------NLWTTDWLDQECGELELSFVRGSCLHSVKVKKCGVRLVYERDLEEMEQIQELHSSQCCENFEDIQQHPADDGSIGNSS 301
BLAST of Ghe11G37820 vs. NCBI nr
Match: gi|1029137939|ref|XP_016746966.1| (PREDICTED: TMV resistance protein N-like [Gossypium hirsutum] >gi|1029137941|ref|XP_016746967.1| PREDICTED: TMV resistance protein N-like [Gossypium hirsutum]) HSP 1 Score: 316.62 bits (810), Expect = 5.081e-96 Identity = 166/235 (70.64%), Postives = 182/235 (77.45%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPR---EARWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENIDALTLLK HLKVFGNSR++FDII+PGSE PEWFSQQR +S IKIDLPLEV NDSQWMGV LCCIFVSDDASR E LMC+AVIH YSRQ NCT SNFQGRNP + W + EQPVMKDHI IRYFSR++LY +SL+ G ET+NLW TDCLDQE L+LSF SVKVKKCG R+VYERDLEE Q LHSSQCCANFEDIQQ+S D GSIG +
Sbjct: 1040 LAENIDALTLLKKHLKVFGNSRKIFDIIIPGSEMPEWFSQQRGESWIKIDLPLEVRNDSQWMGVALCCIFVSDDASRDENLMCSAVIHGGYSRQVNCTLSNFQGRNPLPVGSSGWNVNFH--FEQPVMKDHILIRYFSRDKLYPVSLEENFGERETNNLWTTDCLDQECHQLDLSFTDPFH-NSVKVKKCGVRIVYERDLEET---QVLHSSQCCANFEDIQQHSADDGSIGKGS 1268
BLAST of Ghe11G37820 vs. ExPASy TrEMBL
Match: A0A1U8PQ39_GOSHI (disease resistance protein TAO1-like OS=Gossypium hirsutum OX=3635 GN=LOC107960526 PE=4 SV=1) HSP 1 Score: 471.47 bits (1212), Expect = 6.926e-163 Identity = 223/229 (97.38%), Postives = 226/229 (98.69%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREARWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQELELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENIDALTLLKNHLKVFGNSREV DIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREARWGICIFPPEEQPVMKDHIFIRYFSR+ELYQISLKHKCGGCETDNLWATDCLDQE ELSFEVGICIASVKVKKCGARLVYERDLEEMEQI+ELHSSQCCANFEDIQQYSDDVGSIGN +
Sbjct: 294 LAENIDALTLLKNHLKVFGNSREVSDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREARWGICIFPPEEQPVMKDHIFIRYFSRDELYQISLKHKCGGCETDNLWATDCLDQEHELSFEVGICIASVKVKKCGARLVYERDLEEMEQIKELHSSQCCANFEDIQQYSDDVGSIGNGS 522
BLAST of Ghe11G37820 vs. ExPASy TrEMBL
Match: A0A1U8P1A1_GOSHI (TMV resistance protein N-like OS=Gossypium hirsutum OX=3635 GN=LOC107954045 PE=4 SV=1) HSP 1 Score: 328.561 bits (841), Expect = 4.770e-106 Identity = 168/231 (72.73%), Postives = 187/231 (80.95%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREA-RWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGN 231
LAENI+ALTLL+ HLKVFGNSR++FD+++PGSE PEWFSQQR +S IKIDLPLEV NDSQWMGV LCCIFVSDD SR E L+C AVIH+RYSRQAN TQSNFQGRNPRE R G + EQPVMKDHIF+RYFSR LY ISL+ KC ET+NLW TDCL+QE LELSF SV KKCG R+VY+RDLEEMEQI+ELHSSQCCANFEDIQQ+ D GSIGN
Sbjct: 330 LAENINALTLLRKHLKVFGNSRKLFDVVIPGSEIPEWFSQQRGESWIKIDLPLEVRNDSQWMGVALCCIFVSDDTSRNEHLICRAVIHDRYSRQANRTQSNFQGRNPREVIRSGWNVNRHFEQPVMKDHIFVRYFSRGMLYLISLEDKCDERETNNLWITDCLEQECDQLELSFTGP---YSVNAKKCGVRIVYKRDLEEMEQIKELHSSQCCANFEDIQQHFADDGSIGN 557
BLAST of Ghe11G37820 vs. ExPASy TrEMBL
Match: A0A2P5QLT3_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD27582 PE=4 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 7.241e-103 Identity = 170/231 (73.59%), Postives = 186/231 (80.52%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREA-RWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGN 231
LAENIDALTLLK HLKVFGNSR++FD+I+PGSE PEWFSQQR DS IKIDLPLEV NDSQWMG+ LCC+FVSDD SR E L+C AVIH+RYSRQAN TQSNFQGRNPRE R G + EQPVMKDHIF+RYFSR LY ISL+ KC ET+NLW TD LDQE LELSF SV KKCG R+VY+RDLEEMEQI+ELHSSQCCANFEDIQQ+S D GSI N
Sbjct: 743 LAENIDALTLLKKHLKVFGNSRKLFDVIIPGSEIPEWFSQQRGDSWIKIDLPLEVRNDSQWMGLALCCVFVSDDTSRNEHLICRAVIHDRYSRQANRTQSNFQGRNPREVIRSGWNVNRHFEQPVMKDHIFVRYFSRGMLYPISLEDKCDERETNNLWITDSLDQECDQLELSF---TGPYSVNAKKCGVRIVYKRDLEEMEQIKELHSSQCCANFEDIQQHSADDGSIDN 970
BLAST of Ghe11G37820 vs. ExPASy TrEMBL
Match: A0A1U8PBC4_GOSHI (TMV resistance protein N-like OS=Gossypium hirsutum OX=3635 GN=LOC107956395 PE=4 SV=1) HSP 1 Score: 334.724 bits (857), Expect = 6.251e-102 Identity = 172/233 (73.82%), Postives = 187/233 (80.26%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREARW-GICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENIDALTLLK HLKVFGNS+++F II+PGSE PEW SQQR +SSIKIDLPLEV NDSQWMGV LCCIFVSDDASR E LMC AVIH RYSRQANC+QSNFQGR PR+ W G + EQ VMKDHI IRYFSR++LY ISL+ KCG ET+NLW TDCLDQE LELSF IC SVKVKKCG R+VYERDLEE Q LHSSQCCANFEDIQQ+S D GSIG +
Sbjct: 1247 LAENIDALTLLKKHLKVFGNSKKIFTIIIPGSEMPEWISQQRGESSIKIDLPLEVRNDSQWMGVALCCIFVSDDASRDERLMCRAVIHGRYSRQANCSQSNFQGRVPRQVDWSGYTVNDHFEQHVMKDHILIRYFSRDKLYPISLEDKCGVHETNNLWTTDCLDQECHQLELSFTDFIC-NSVKVKKCGVRIVYERDLEET---QVLHSSQCCANFEDIQQHSADDGSIGKGS 1475
BLAST of Ghe11G37820 vs. ExPASy TrEMBL
Match: A0A2P5WJT5_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_AA29349 PE=4 SV=1) HSP 1 Score: 330.872 bits (847), Expect = 9.607e-101 Identity = 169/235 (71.91%), Postives = 189/235 (80.43%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNP---REARWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENIDALTLLK HLKVFGNSR++FDII+PGSE PEWFSQQ +S IKIDLPLEV NDSQWMGV LCCIFVSDDASR E+LMC AVIH YSRQANCTQSNFQGRNP + W + EQPVMKDHI IRYFSR++LY +SL+ G ET+NLW TDCLDQE LELSF SV+VKKCG R++YERDLE++EQI+ELHSSQCCANFEDIQQ+SDD GSIG +
Sbjct: 1205 LAENIDALTLLKKHLKVFGNSRKIFDIIIPGSEMPEWFSQQGGESWIKIDLPLEVRNDSQWMGVALCCIFVSDDASRDEDLMCRAVIHGGYSRQANCTQSNFQGRNPLPVDSSGWNVNYH--FEQPVMKDHILIRYFSRDKLYPVSLEENFGERETNNLWTTDCLDQECHQLELSFTDP---RSVEVKKCGVRIMYERDLEDIEQIKELHSSQCCANFEDIQQHSDDDGSIGKGS 1434
BLAST of Ghe11G37820 vs. ExPASy TrEMBL
Match: A0A1U8J1W6_GOSHI (disease resistance protein RPS4-like OS=Gossypium hirsutum OX=3635 GN=LOC107902699 PE=4 SV=1) HSP 1 Score: 300.056 bits (767), Expect = 1.060e-98 Identity = 159/232 (68.53%), Postives = 175/232 (75.43%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREARWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQ---ELELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENIDALTLLK HLKVFGNS ++F+ I+PGSE PEWFSQQR DSSIKIDLPLEVWND+QWMG+ LCCIFV DDASRAEEL+ AV SNF+GRNPR GI F P+E PVMKDHIFIRYFSR+E+Y+ NLW TD LDQ ELELSF G C+ SVKVKKCG RLVYERDLEEMEQIQELHSSQCC NFEDIQQ+ D GSIGN++
Sbjct: 94 LAENIDALTLLKKHLKVFGNSGKMFNFILPGSEIPEWFSQQRGDSSIKIDLPLEVWNDNQWMGIALCCIFVRDDASRAEELVFRAVY----------GLSNFKGRNPRGFMRGIWTFSPDE-PVMKDHIFIRYFSRDEMYR-------------NLWTTDWLDQECGELELSFVRGSCLHSVKVKKCGVRLVYERDLEEMEQIQELHSSQCCENFEDIQQHPADDGSIGNSS 301
BLAST of Ghe11G37820 vs. ExPASy TrEMBL
Match: A0A1U8P6W4_GOSHI (TMV resistance protein N-like OS=Gossypium hirsutum OX=3635 GN=LOC107955672 PE=4 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 4.268e-96 Identity = 166/235 (70.64%), Postives = 182/235 (77.45%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPR---EARWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENIDALTLLK HLKVFGNSR++FDII+PGSE PEWFSQQR +S IKIDLPLEV NDSQWMGV LCCIFVSDDASR E LMC+AVIH YSRQ NCT SNFQGRNP + W + EQPVMKDHI IRYFSR++LY +SL+ G ET+NLW TDCLDQE L+LSF SVKVKKCG R+VYERDLEE Q LHSSQCCANFEDIQQ+S D GSIG +
Sbjct: 1040 LAENIDALTLLKKHLKVFGNSRKIFDIIIPGSEMPEWFSQQRGESWIKIDLPLEVRNDSQWMGVALCCIFVSDDASRDENLMCSAVIHGGYSRQVNCTLSNFQGRNPLPVGSSGWNVNFH--FEQPVMKDHILIRYFSRDKLYPVSLEENFGERETNNLWTTDCLDQECHQLDLSFTDPFH-NSVKVKKCGVRIVYERDLEET---QVLHSSQCCANFEDIQQHSADDGSIGKGS 1268
BLAST of Ghe11G37820 vs. ExPASy TrEMBL
Match: A0A2P5QLS3_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD27576 PE=4 SV=1) HSP 1 Score: 314.694 bits (805), Expect = 9.159e-96 Identity = 160/218 (73.39%), Postives = 177/218 (81.19%), Query Frame = 0
Query: 19 LKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREAR-WGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQE---LELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNA 232
L+VFGNSR++FDII+PGSE PEWFSQQR SSIKIDLPLEV ND QWMGV LCCIFVSDDASR EELMC AVIH RYSRQ+NCTQSNFQGR+ R+ G+ I E+PVMKDH+ IRYFSR++LY ISL+ KC ET+N W T CLDQE LELSFE SVKVKKCG R+VYERDLEEMEQIQELHSS+CCANFEDIQQ+S D GSIGN
Sbjct: 940 LQVFGNSRKLFDIIIPGSEMPEWFSQQRGGSSIKIDLPLEVRNDCQWMGVSLCCIFVSDDASREEELMCRAVIHGRYSRQSNCTQSNFQGRDRRKVDCSGLIINYNFERPVMKDHVLIRYFSRDKLYPISLEDKCDERETNNFWTTGCLDQECHQLELSFERP---NSVKVKKCGVRIVYERDLEEMEQIQELHSSKCCANFEDIQQHSADDGSIGNG 1154
BLAST of Ghe11G37820 vs. ExPASy TrEMBL
Match: A0A1U8I337_GOSHI (disease resistance-like protein CSA1 OS=Gossypium hirsutum OX=3635 GN=LOC107890093 PE=4 SV=1) HSP 1 Score: 298.13 bits (762), Expect = 7.522e-95 Identity = 159/232 (68.53%), Postives = 170/232 (73.28%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREARWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQ---ELELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENIDALTLLK HLKVFGNS ++FD I+PGSE PEWFSQQR DSSIKIDLPLEVWND+QWMGV CCIFVSDDASR EEL+ AV SNF+GRNPRE I FPP E PVMKDHIFI YFSR+E Y+ N W TD LDQ ELELSF G + SVKVKKCG RLVYERDLEEMEQIQELHSSQCC NFEDIQQ+S D GSIGN +
Sbjct: 314 LAENIDALTLLKKHLKVFGNSGKMFDFILPGSEIPEWFSQQRGDSSIKIDLPLEVWNDNQWMGVAFCCIFVSDDASRVEELVLRAV----------SGLSNFKGRNPREFMRVIWTFPPGE-PVMKDHIFISYFSRDEKYR-------------NSWTTDWLDQECDELELSFVRGFALDSVKVKKCGVRLVYERDLEEMEQIQELHSSQCCENFEDIQQHSADDGSIGNGS 521
BLAST of Ghe11G37820 vs. ExPASy TrEMBL
Match: A0A2P5QNQ6_GOSBA (Uncharacterized protein OS=Gossypium barbadense OX=3634 GN=GOBAR_DD26873 PE=4 SV=1) HSP 1 Score: 300.442 bits (768), Expect = 2.032e-91 Identity = 159/232 (68.53%), Postives = 170/232 (73.28%), Query Frame = 0
Query: 5 LAENIDALTLLKNHLKVFGNSREVFDIIMPGSETPEWFSQQRNDSSIKIDLPLEVWNDSQWMGVVLCCIFVSDDASRAEELMCAAVIHNRYSRQANCTQSNFQGRNPREARWGICIFPPEEQPVMKDHIFIRYFSREELYQISLKHKCGGCETDNLWATDCLDQ---ELELSFEVGICIASVKVKKCGARLVYERDLEEMEQIQELHSSQCCANFEDIQQYSDDVGSIGNAN 233
LAENIDALTLLK HLKVFGNS ++FD I+PGSE PEWFSQQR DSSIKIDLPLEVWND+QWMGV CCIFVSDDASR EEL+ AV SNF+GRNPRE I FPP E PVMKDHIFI YFSR+E Y+ N W TD LDQ ELELSF G + SVKVKKCG RLVYERDLEEMEQIQELHSSQCC NFEDIQQ+S D GSIGN +
Sbjct: 792 LAENIDALTLLKKHLKVFGNSGKMFDFILPGSEIPEWFSQQRGDSSIKIDLPLEVWNDNQWMGVAFCCIFVSDDASRVEELVLRAV----------SGLSNFKGRNPREFMRVIWTFPPGE-PVMKDHIFISYFSRDEKYR-------------NSWTTDWLDQECDELELSFVRGFALDSVKVKKCGVRLVYERDLEEMEQIQELHSSQCCENFEDIQQHSADDGSIGNGS 999 The following BLAST results are available for this feature:
BLAST of Ghe11G37820 vs. ExPASy Swiss-Prot
Analysis Date: 2020-04-17 (BLASTP of WHU_v1_a1 Gossypium herbaceum proteins vs UniProt Swissprot) Total hits: 0
BLAST of Ghe11G37820 vs. Araport11
Analysis Date: 2020-04-17 (BLASTP of WHU_v1_a1 Gossypium herbaceum proteins vs arabidopsis Araport11) Total hits: 1
BLAST of Ghe11G37820 vs. NCBI nr
Analysis Date: 2020-04-17 (BLASTP of WHU_v1_a1 Gossypium herbaceum proteins vs NCBI nr) Total hits: 10
BLAST of Ghe11G37820 vs. ExPASy TrEMBL
Analysis Date: 2020-04-17 (BLASTP of WHU_v1_a1 Gossypium herbaceum proteins vs UniProt TrEMBL) Total hits: 10
InterPro
Analysis Name: InterProScan WHU_v1_a1 Gossypium herbaceum proteins
Date Performed: 2020-04-17
Sequences
The
following sequences are available for this feature:
mRNA sequence >Ghe11G37820_WHU-A1_v1 ID=Ghe11G37820_WHU-A1_v1; Name=Ghe11G37820; organism=Gossypium herbaceum; type=mRNA; length=810bpback to top protein sequence of Ghe11G37820_WHU-A1_v1 >Ghe11G37820_WHU-A1_v1 ID=Ghe11G37820_WHU-A1_v1; Name=Ghe11G37820_WHU-A1_v1; organism=Gossypium herbaceum; type=polypeptide; length=269bpback to top mRNA from alignment at Chr11:122267559..122269277+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>Ghe11G37820_WHU-A1_v1 ID=Ghe11G37820_WHU-A1_v1; Name=Ghe11G37820; organism=Gossypium herbaceum; type=mRNA; length=1719bp; location=Sequence derived from: Chr11:122267559..122269277+ (Gossypium herbaceumback to top Coding sequence (CDS) from alignment at Chr11:122267559..122269277+ >Ghe11G37820_WHU-A1_v1 ID=Ghe11G37820_WHU-A1_v1; Name=Ghe11G37820; organism=Gossypium herbaceum; type=CDS; length=810bp; location=Sequence derived from: Chr11:122267559..122269277+ (Gossypium herbaceumback to top |