2024 CottonGen Citations

Peer-reviewed papers citing CottonGen in 2024 (37) with links to publications. 
 

  1. Liu, Fujie, et al. "General Regulatory Factor7 regulates innate immune signalling to enhance Verticillium wilt resistance in cotton." Journal of Experimental Botany 75.1 (2024): 468-482.
     
  2. Wei, X., Geng, M., Yuan, J., Zhan, J., Liu, L., Chen, Y., ... & Ge, X. (2024). GhRCD1 promotes cotton tolerance to cadmium by regulating the GhbHLH12–GhMYB44–GhHMA1 transcriptional cascade. Plant Biotechnology Journal.
     
  3. Wei, R., Zhong, Y., Xu, N., Li, P., Azhar, M. T., Yang, Z., ... & Shang, H. (2024). The comparative transcriptome and co-expression of hub genes analysis for fiber development in RIL populations of upland cotton. Industrial Crops and Products, 210, 118130.
     
  4. Wang, N. N., Ni, P., Wei, Y. L., Hu, R., Li, Y., Li, X. B., & Zheng, Y. (2024). Phosphatidic acid interacts with an HD‐ZIP transcription factor GhHOX4 to influence its function in fiber elongation of cotton (Gossypium hirsutum). The Plant Journal.
     
  5. Zhu, H., Xu, J., Yu, K., Wu, J., Xu, H., Wang, S., & Wen, T. (2024). Genome-wide identification of the key Kinesin genes during fiber and boll development in upland cotton (Gossypium hirsutum L). Molecular Genetics and Genomics, 299(1), 1-13.
     
  6. Duan, Y., Shang, X., Tian, R., Li, W., Song, X., Zhang, D., & Guo, W. (2024). Suppressing a mitochondrial calcium uniporter activates the calcium signaling pathway and promotes cell elongation in cotton. The Crop Journal.
     
  7. Zhang, S., Wang, H., Li, X., Tang, L., Cai, X., Liu, C., ... & Zhang, J. (2024). Aspartyl proteases identified as candidate genes of a fiber length QTL, qFL D05, that regulates fiber length in cotton (Gossypium hirsutum L.). Theoretical and Applied Genetics, 137(3), 59.
     
  8. Mao, X., Wei, Z., Xu, Z., Qanmber, G., Liu, J., Li, Y., ... & Wang, Z. (2024). A cotton APS REDUCTASE represses root hair elongation via sulfur assimilation and hydrogen peroxide‐mediated cell wall damage. Physiologia Plantarum, 176(1), e14200.
     
  9. Gong, J., Sun, S., Zhu, Q. H., Qin, J., Yang, Y., Zheng, Z., ... & Sun, J. (2024). Gh4CL20/20A involved in flavonoid biosynthesis is essential for male fertility in cotton (Gossypium hirsutum L.). Plant Physiology and Biochemistry, 108484.
     
  10. Huwanixi, A., Peng, Z., Li, S., Zhou, Y., Zhao, S., & Wan, C. (2024). Comparative proteomic analysis of seed germination between allotetraploid cotton Gossypium hirsutum and Gossypium barbadense. Journal of Proteomics, 105130.
     
  11. Shu, H., Sun, S., Wang, X., Chen, J., Yang, C., Zhang, G., ... & Liu, R. (2024). Thidiazuron combined with cyclanilide modulates hormone pathways and ROS systems in cotton, increasing defoliation at low temperatures. Frontiers in Plant Science, 15, 1333816.
     
  12. Revanasiddayya, J. M. N., Fakrudin, B., Kuchanur, P., Yogeesh, L. N., Hanchinal, S., Suma, T. C., ... & Raghavendra, V. C. (2024). Genetic diversity among coloured cotton genotypes in relation to their fibre colour and ploidy level based on SSR markers. Czech J. Genet. Plant Breed, 60, 12-24.
     
  13. Yadav, M., Saxena, G., Verma, R. K., Asif, M. H., Singh, V. P., Sawant, S. V., & Singh, S. P. (2024). Genome-wide identification and expression analysis of autophagy-related genes (ATG) in Gossypium spp. reveals their crucial role in stress tolerance. South African Journal of Botany, 167, 82-93.
    Cited By
  14. Guo, H., Zhang, L., Guo, H., Cui, X., Fan, Y., Li, T., ... & Zeng, F. (2024). Single-cell transcriptome atlas reveals somatic cell embryogenic differentiation features during regeneration. Plant Physiology, kiae107.
     
  15. Guo, A., Li, H., Huang, Y., Ma, X., Li, B., Du, X., ... & Hua, J. (2024). Yield‐related quantitative trait loci identification and lint percentage hereditary dissection under salt stress in upland cotton. The Plant Journal.
     
  16. Liu, J., Miao, P., Qin, W., Hu, W., Wei, Z., Ding, W., ... & Wang, Z. (2024). A novel single nucleotide mutation of TFL1 alters the plant architecture of Gossypium arboreum through changing the pre-mRNA splicing. Plant Cell Reports, 43(1), 1-15.
     
  17. Hernandez, G., Hulse-Kemp, A. M., & Storm, A. R. (2024). Gossypium hirsutum gene of unknown function Gohir. A02G131900 encodes a potential plant-specific, dual-domain exo-1, 3-β-glucosidase. Micropublication Biology, 2024.
     
  18. Sun, Y., Tian, Z., Zuo, D., Wang, Q., & Song, G. (2024). GhUBC10‐2 mediates GhGSTU17 degradation to regulate salt tolerance in cotton (Gossypium hirsutum). Plant, Cell & Environment.
     
  19. Zhou, T., Wang, P., Xu, J., Liang, D., Yang, Y., Wang, Y., ... & Sun, G. (2024). Functional verification of GhAFP8 in upland cotton under verticillium wilt stress. Plant Stress, 11, 100382.
     
  20. Mei, Z., Li, B., Zhu, S., Li, Y., Yao, J., Pan, J., ... & Chen, W. (2024). A Genome-Wide Analysis of the CEP Gene Family in Cotton and a Functional Study of GhCEP46-D05 in Plant Development. International Journal of Molecular Sciences, 25(8), 4231.
     
  21. Zhang, J., Meng, Q., Wang, Q., Zhang, H., Tian, H., Wang, T., ... & Luo, M. (2024). Cotton sphingosine kinase GhLCBK1 participates in fiber cell elongation by affecting sphingosine-1-phophate and auxin synthesis. International Journal of Biological Macromolecules, 131323.
     
  22. Wu, Y., Sun, R., Huan, T., Zhao, Y., Yu, D., & Sun, Y. (2024). An insight into the gene expression evolution in Gossypium species based on the leaf transcriptomes. BMC genomics, 25(1), 179.
     
  23. Ma, J., Jia, B., Bian, Y., Pei, W., Song, J., Wu, M., ... & Yu, J. (2024). Genomic and co-expression network analyses reveal candidate genes for oil accumulation based on an introgression population in Upland cotton (Gossypium hirsutum). Theoretical and Applied Genetics, 137(1), 23.
  24. Wu, N., Lu, B., Muhammad, Y., Cao, Y., & Rong, J. (2024). Characterization and expression analysis of GLABRA3 (GL3) genes in cotton: insights into trichome development and hormonal regulation. Molecular Biology Reports, 51(1), 1-15.
     
  25. Graffam, D., Cutlan, M., Storm, A. R., Hulse-Kemp, A. M., & Stoeckman, A. K. (2024). Gossypium hirsutum gene of unknown function Gohir. A02G161000 encodes a potential transmembrane Root UVB Sensitive 4 Protein with a putative protein-protein interaction interface. Micropublication Biology, 2024.
     
  26. Feng, C., Stetina, S. R., & Erpelding, J. E. (2024). Transcriptome Analysis of Resistant Cotton Germplasm Responding to Reniform Nematodes. Plants, 13(7), 958.
     
  27. Zuo, D., Chen, L., Ashraf, J., Cheng, H., Zhang, Y., Wang, Q., ... & Song, G. (2024). Genome-wide identification of cotton CrRLK1L family genes and potential function of GhCrRLK1L104 in cell elongation. Current Plant Biology, 37, 100325.
     
  28. Song, X., Zhu, G., Su, X., Yu, Y., Duan, Y., Wang, H., ... & Guo, W. (2024). Combined genome and transcriptome analysis of elite fiber quality in Gossypium barbadense. Plant Physiology, kiae175.
     
  29. Zhang, D., Li, M., Chen, C., Wang, Y., Cheng, Z., Li, W., & Guo, W. (2024). Downregulation of GhALKBH10B improves drought tolerance through increasing the stability of photosynthesis related-and ABA signaling pathway genes in cotton. Environmental and Experimental Botany, 105687.
     
  30. Wang, F., Liang, S., Wang, G., Wang, Q., Xu, Z., Li, B., ... & Jin, S. (2024). Comprehensive analysis of MAPK gene family in upland cotton (Gossypium hirsutum) and functional characterization of GhMPK31 in regulating defense response to insect infestation. Plant Cell Reports, 43(4), 102.
     
  31. Fang, S., Shang, X., He, Q., Li, W., Song, X., Zhang, B., & Guo, W. (2024). A cell wall–localized β-1, 3-glucanase promotes fiber cell elongation and secondary cell wall deposition. Plant Physiology, 194(1), 106-123.
    Cited By
  32. Jin, X., Chai, Q., Liu, C., Niu, X., Li, W., Shang, X., ... & Guo, W. (2024). Cotton GhNAC4 promotes drought tolerance by regulating secondary cell wall biosynthesis and ribosomal protein homeostasis. The Plant Journal, 117(4), 1052-1068.
    Cited By
  33. Tian, X., Ji, M., You, J., Zhang, Y., Lindsey, K., Zhang, X., ... & Wang, M. (2024). Synergistic interplay of redox homeostasis and polysaccharide synthesis promotes cotton fiber elongation. The Plant Journal.|
     
  34. Nadeem, S., Riaz Ahmed, S., Luqman, T., Tan, D. K., Maryum, Z., Akhtar, K. P., ... & Liu, Y. (2024). A comprehensive review on Gossypium hirsutum resistance against cotton leaf curl virus. Frontiers in Genetics, 15, 1306469.
     
  35. Li, Z., Fan, H., Yang, L., Wang, S., Hong, D., Cui, W., ... & Liu, Y. (2024). Multi-omics analysis of the effects of soil amendment on rapeseed (Brassica napus L.) photosynthesis under drip irrigation with brackish water. International Journal of Molecular Sciences, 25(5), 2521.
     
  36. Zhang, Z., Zhang, Z., Akher, S. A., Xue, J., Wang, J., Guo, C., ... & Guo, Y. (2024). Integrative Analysis of the DUF668 Gene Family in Nicotiana tabacum to Excavate Their Potential Roles in Abiotic Stress Responses. Agronomy, 14(3), 445.
     
  37. Khuman, A., Yadav, V., & Chaudhary, B. (2024). Evolutionary dynamics of the cytoskeletal profilin gene family in Brassica juncea L. reveal its roles in silique development and stress resilience. International Journal of Biological Macromolecules, 131247.