g.arboreum_cottongen_reftransV1_0000546, g.arboreum_cottongen_reftransV1_0000546 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy TrEMBL
Match: B9HAE8_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0006s27100g PE=4 SV=2) HSP 1 Score: 262.692 bits (670), Expect = 3.034e-79 Identity = 125/152 (82.24%), Postives = 134/152 (88.16%), Query Frame = -3 Query: 1 EMEEETLNPHSTLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPTLAHEKSLADIQAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGLIAPA 456 EMEE+ LYEAYNELHGLAQEL+ PFDAPAVLVVGHQTDGKSALVE LMGFQFNHVGGGTKTRRPITLHM YDP C+VP C+LVSDDDP+ A EKSL +IQAYIE ENMRLE+E QFSAKEIII+V+YKHCPNLTIIDTPGLIAPA Sbjct: 41 EMEEQW-----RLYEAYNELHGLAQELKTPFDAPAVLVVGHQTDGKSALVEGLMGFQFNHVGGGTKTRRPITLHMKYDPECEVPTCHLVSDDDPSFAQEKSLHEIQAYIEYENMRLEKESFQFSAKEIIIRVEYKHCPNLTIIDTPGLIAPA 187
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy TrEMBL
Match: A0A059ATF5_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_I02694 PE=4 SV=1) HSP 1 Score: 261.922 bits (668), Expect = 3.053e-79 Identity = 122/143 (85.31%), Postives = 132/143 (92.31%), Query Frame = -3 Query: 1 HSTLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPTLAHEKSLADIQAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGLIAPA 429 S+LYEAYNELHGLAQE + PFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHM +DP CD PLC+LVSD DP L+ + SL +IQAYIEAENMRLEREPCQFS+KEIIIKV+YK+CPNLTIIDTPGLIAPA Sbjct: 18 QSSLYEAYNELHGLAQEFDTPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMRFDPSCDDPLCHLVSDADPALSRQLSLHEIQAYIEAENMRLEREPCQFSSKEIIIKVEYKYCPNLTIIDTPGLIAPA 160
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy TrEMBL
Match: A0A087HAZ8_ARAAL (Uncharacterized protein OS=Arabis alpina GN=AALP_AA3G226600 PE=4 SV=1) HSP 1 Score: 256.529 bits (654), Expect = 4.755e-77 Identity = 123/160 (76.88%), Postives = 136/160 (85.00%), Query Frame = -3 Query: 1 IETEMEEE-----TLNPHSTLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPTLAHEKSLADIQAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGLIAPA 465 +E+ EEE + +LYEAYNELH LAQELE PF+APAVLVVG QTDGKSALVEALMGFQFNHVGGGTKTRRPITLHM YDP C PLC+L SDDDP++A KSL+ IQAYIEAENMRLE+EPC FSAKEII+KV+YK+CPNLTIIDTPGLIAPA Sbjct: 8 VESIAEEEDDVAAAIEERWSLYEAYNELHALAQELETPFEAPAVLVVGQQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMKYDPHCQFPLCHLGSDDDPSVALPKSLSQIQAYIEAENMRLEQEPCPFSAKEIIVKVQYKYCPNLTIIDTPGLIAPA 167
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy TrEMBL
Match: V4T840_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10000359mg PE=4 SV=1) HSP 1 Score: 256.144 bits (653), Expect = 6.726e-77 Identity = 124/153 (81.05%), Postives = 136/153 (88.89%), Query Frame = -3 Query: 1 EEETLNPHSTLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDD-DPTLAHEKSLADIQAYIEAENMRLERE--PCQFSAKEIIIKVKYKHCPNLTIIDTPGLIAPA 450 EE N +LYEAYNELHGLAQEL+ PFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHM Y+PLC++PLC+L S D DPTLA EKSL +IQ++IEAENMRLERE QFSAKEIIIKV++K+CPNLTIIDTPGLIAPA Sbjct: 5 EEAKCNDMHSLYEAYNELHGLAQELQTPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMKYNPLCELPLCHLASSDVDPTLAQEKSLQEIQSFIEAENMRLERESNSNQFSAKEIIIKVEFKYCPNLTIIDTPGLIAPA 157
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy TrEMBL
Match: A0A067EN48_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004351mg PE=4 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 1.752e-76 Identity = 122/144 (84.72%), Postives = 133/144 (92.36%), Query Frame = -3 Query: 1 TLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDD-DPTLAHEKSLADIQAYIEAENMRLERE--PCQFSAKEIIIKVKYKHCPNLTIIDTPGLIAPA 423 +LYEAYNELHGLAQELE PFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHM Y+PLC++PLC+L S D DPTLA EKSL +IQ++IEAENMRLERE QFSAKEIIIKV++K+CPNLTIIDTPGLIAPA Sbjct: 3 SLYEAYNELHGLAQELETPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMKYNPLCELPLCHLASSDVDPTLAQEKSLQEIQSFIEAENMRLERESNSNQFSAKEIIIKVEFKYCPNLTIIDTPGLIAPA 146
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy TrEMBL
Match: R0HWU5_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10013023mg PE=4 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 2.076e-76 Identity = 119/141 (84.40%), Postives = 129/141 (91.49%), Query Frame = -3 Query: 1 TLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPTLAHEKSLADIQAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGLIAPA 423 +LYEAYNELH LAQELE PF+APAVLVVG QTDGKSALVEALMGFQFNHVGGGTKTRRPITLHM YDP C PLC+L SDDDP++A KSL+ IQAYIEAENMRLE+EPC FSAKEII+KV+YK+CPNLTIIDTPGLIAPA Sbjct: 25 SLYEAYNELHALAQELETPFEAPAVLVVGQQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMKYDPQCHFPLCHLGSDDDPSVALPKSLSQIQAYIEAENMRLEQEPCPFSAKEIIVKVQYKYCPNLTIIDTPGLIAPA 165
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy TrEMBL
Match: D7LA27_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_479490 PE=4 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 2.141e-76 Identity = 117/141 (82.98%), Postives = 129/141 (91.49%), Query Frame = -3 Query: 1 TLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPTLAHEKSLADIQAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGLIAPA 423 +LYEAYNELH LAQELE PF+APAVLVVG QTDGKSALVEALMGFQFNHVGGGTKTRRPITLHM YDP C PLC+L SDDDP+++ KSL+ IQAYIEAENMRLE+EPC FS+KEII+KV+YK+CPNLTIIDTPGLIAPA Sbjct: 25 SLYEAYNELHALAQELETPFEAPAVLVVGQQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMKYDPQCQFPLCHLGSDDDPSVSLPKSLSQIQAYIEAENMRLEQEPCPFSSKEIIVKVQYKYCPNLTIIDTPGLIAPA 165
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy TrEMBL
Match: A0A067EZ56_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g004351mg PE=4 SV=1) HSP 1 Score: 254.218 bits (648), Expect = 2.291e-76 Identity = 122/144 (84.72%), Postives = 133/144 (92.36%), Query Frame = -3 Query: 1 TLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDD-DPTLAHEKSLADIQAYIEAENMRLERE--PCQFSAKEIIIKVKYKHCPNLTIIDTPGLIAPA 423 +LYEAYNELHGLAQELE PFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHM Y+PLC++PLC+L S D DPTLA EKSL +IQ++IEAENMRLERE QFSAKEIIIKV++K+CPNLTIIDTPGLIAPA Sbjct: 3 SLYEAYNELHGLAQELETPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMKYNPLCELPLCHLASSDVDPTLAQEKSLQEIQSFIEAENMRLERESNSNQFSAKEIIIKVEFKYCPNLTIIDTPGLIAPA 146
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy TrEMBL
Match: V4LVQ1_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10020106mg PE=4 SV=1) HSP 1 Score: 254.603 bits (649), Expect = 2.849e-76 Identity = 118/141 (83.69%), Postives = 128/141 (90.78%), Query Frame = -3 Query: 1 TLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPTLAHEKSLADIQAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGLIAPA 423 +LYEAYNELH LAQELE PF+APAVLVVG QTDGKSALVEALMGFQFNHVGGGTKTRRPITLHM YDP C PLC+L SDDDP++A KSL+ IQAYIEAENMRLE+E C FSAKEII+KV+YK+CPNLTIIDTPGLIAPA Sbjct: 38 SLYEAYNELHALAQELETPFEAPAVLVVGQQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMKYDPQCQFPLCHLGSDDDPSVALPKSLSQIQAYIEAENMRLEQEACPFSAKEIIVKVQYKYCPNLTIIDTPGLIAPA 178
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy TrEMBL
Match: W9RMP1_9ROSA (Dynamin-like protein ARC5 OS=Morus notabilis GN=L484_020256 PE=4 SV=1) HSP 1 Score: 253.832 bits (647), Expect = 4.528e-76 Identity = 124/156 (79.49%), Postives = 133/156 (85.26%), Query Frame = -3 Query: 1 KIETEMEEETLNPHSTLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPTLAHEKSLADIQAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGLIAPA 468 K+ TE EE+ S LYEAYNELHGLAQE + PFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHM Y P + PLC LVSD DP LA +KSL ++QAYIEAENMRLE EP QFSAKEIII V+YK+CPNLTIIDTPGLIAPA Sbjct: 6 KMPTEWEEK-----SALYEAYNELHGLAQEFQTPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMRYHPDRESPLCRLVSDADPALAEDKSLKEVQAYIEAENMRLESEPSQFSAKEIIINVEYKYCPNLTIIDTPGLIAPA 156
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy Swiss-Prot
Match: ARC5_ARATH (Dynamin-like protein ARC5 OS=Arabidopsis thaliana GN=ARC5 PE=1 SV=2) HSP 1 Score: 253.062 bits (645), Expect = 1.017e-77 Identity = 122/156 (78.21%), Postives = 134/156 (85.90%), Query Frame = -3 Query: 1 EMEEE---TLNPHSTLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPTLAHEKSLADIQAYIEAENMRLEREPCQ-FSAKEIIIKVKYKHCPNLTIIDTPGLIAPA 456 EM EE + +LYEAYNELH LAQELE PF+APAVLVVG QTDGKSALVEALMGFQFNHVGGGTKTRRPITLHM YDP C PLC+L SDDDP+++ KSL+ IQAYIEAENMRLE+EPC FSAKEII+KV+YK+CPNLTIIDTPGLIAPA Sbjct: 13 EMAEEDDAAIEERWSLYEAYNELHALAQELETPFEAPAVLVVGQQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMKYDPQCQFPLCHLGSDDDPSVSLPKSLSQIQAYIEAENMRLEQEPCSPFSAKEIIVKVQYKYCPNLTIIDTPGLIAPA 168
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy Swiss-Prot
Match: DRP5A_ARATH (Dynamin-related protein 5A OS=Arabidopsis thaliana GN=DRP5A PE=2 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 3.440e-21 Identity = 56/162 (34.57%), Postives = 86/162 (53.09%), Query Frame = -3 Query: 1 SKIETEMEEETLNPHSTLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDD----PTLAHEKSLAD-IQAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGLIAPA 471 SK+++ ++ + +EAYN L A P ++ +G Q+DGKS+L+EAL+GF+FN TRRP+ L M +D P C +D + ++AD I++ EA L++ S K I+++ +Y HCPNLTIIDTPG + A Sbjct: 25 SKMQSHSKDPINAESRSRFEAYNRLQAAAVAFGEKLPIPEIVAIGGQSDGKSSLLEALLGFRFNVREVEMGTRRPLILQMVHDLSALEPRCRFQDEDSEEYGSPIVSATAVADVIRSRTEA---LLKKTKTAVSPKPIVMRAEYAHCPNLTIIDTPGFVLKA 183
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy Swiss-Prot
Match: DLPC_DICDI (Dynamin-like protein C OS=Dictyostelium discoideum GN=dlpC PE=2 SV=2) HSP 1 Score: 78.9518 bits (193), Expect = 1.218e-15 Identity = 55/204 (26.96%), Postives = 89/204 (43.63%), Query Frame = -3 Query: 13 SKIETEMEE----ETLNPHST--LYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDD--------------------------------------------DPTLAHEKSLADI-QAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGL 471 +K+E E ++ E++N + LY +N+L ++ + FD P ++VVG Q+DGKS+ +E+L+GFQFN V TRRP+ + M +P P C +D D +E + ++ + I N R R + S+ I ++V++ HC NL I DTPG Sbjct: 79 TKLENERKKLDDSESINASTNQELYSLFNDLQMISHDHNISFDTPELVVVGMQSDGKSSFIESLLGFQFNIVETNIGTRRPLIIQMINNPSKQQPSCRFKKEDYSNSYGGSSSSTSTTSGNSNHNTDKQQNVSSSQGGGGGSNNLNEDKWEEYETPVNELTEEIIRRTNERTGRAGDRVSSIPIFLRVEFAHCSNLNIYDTPGF 282
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy Swiss-Prot
Match: DYNA_DICDI (Dynamin-A OS=Dictyostelium discoideum GN=dymA PE=1 SV=2) HSP 1 Score: 60.8474 bits (146), Expect = 8.911e-10 Identity = 39/129 (30.23%), Postives = 66/129 (51.16%), Query Frame = -3 Query: 13 PFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPT-----LAHEKS-----LADIQAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGL 369 P D P ++VVG Q+ GKS+++E ++G F G G TRRP+ L +++ P+ D D T H+ + ++I+ I + R+ + SA+ I +K+ H NLT++D PG+ Sbjct: 22 PLDLPQIVVVGSQSSGKSSVLENIVGRDFLPRGSGIVTRRPLILQLTHLPIAD--------DGSQTQEWGEFLHKPNDMFYDFSEIREEIIRDTDRMTGKNKGISAQPINLKIYSPHVVNLTLVDLPGI 142
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy Swiss-Prot
Match: MGM1_YEAST (Dynamin-like GTPase MGM1, mitochondrial OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=MGM1 PE=1 SV=3) HSP 1 Score: 56.225 bits (134), Expect = 2.838e-8 Identity = 43/152 (28.29%), Postives = 76/152 (50.00%), Query Frame = -3 Query: 10 EEETLNPHSTLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPTLAHEKSLADIQAYIEAENMRLERE---PCQFSAKE--IIIKVKYKHCPNLTIIDTPGLI 450 ++E LN + E L+ + A P+++V+G Q+ GKS+++E+++G +F G TRRPI L L + P V+ D P++ L +I+ + E + M +E P + E I + +K P+L+++D PG I Sbjct: 181 QDEMLNLTKQMIEIRTILNKVDSS-SAHLTLPSIVVIGSQSSGKSSVLESIVGREFLPKGSNMVTRRPIEL-----TLVNTPNSNNVTADFPSM----RLYNIKDFKEVKRMLMELNMAVPTSEAVSEEPIQLTIKSSRVPDLSLVDLPGYI 322
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy Swiss-Prot
Match: DLPB_DICDI (Dynamin-like protein B OS=Dictyostelium discoideum GN=dlpB PE=2 SV=1) HSP 1 Score: 56.225 bits (134), Expect = 2.880e-8 Identity = 36/142 (25.35%), Postives = 73/142 (51.41%), Query Frame = -3 Query: 13 HSTLYEAYNELHGLAQELEAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSD---DDPTLAHEKSLADIQAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGL 429 + +Y+AYN++ LA++L A + P + +G +GKSAL+E+ +GF +G G+ + RP+ + + + C+ P+ D D + L+ + + I N Q ++ I I ++Y++ N+ +I+ P + Sbjct: 23 YDDMYKAYNKIMVLARDLNAFIETPEFVFIGKDGNGKSALIESFIGFPM-MIGEGS-SLRPLHITLMNNARCEEPIVTFKRDRSLDSYEFDRQIELSMVSSEISKRN--------QKTSIPIEITIEYRYYLNMLLIEPPSV 154
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy Swiss-Prot
Match: DRP3A_ARATH (Dynamin-related protein 3A OS=Arabidopsis thaliana GN=DRP3A PE=1 SV=2) HSP 1 Score: 55.0694 bits (131), Expect = 7.872e-8 Identity = 44/146 (30.14%), Postives = 73/146 (50.00%), Query Frame = -3 Query: 13 STLYEAYNELHGLAQEL--EAPFDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPT----LAHEK--SLADIQAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGL 426 S++ N+L + +L ++ P V+VVG Q+ GKS+++EAL+G F G TRRP+ L + L SDD+ L + ++I+ IEAE RL E + +I +K+ + N+T++D PG+ Sbjct: 35 SSVIPIVNKLQDIFAQLGSQSTIALPQVVVVGSQSSGKSSVLEALVGRDFLPRGNDICTRRPLVLQL----LQTKSRANGGSDDEWGEFRHLPETRFYDFSEIRREIEAETNRLVGENKGVADTQIRLKISSPNVLNITLVDLPGI 176
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy Swiss-Prot
Match: DYN2_HUMAN (Dynamin-2 OS=Homo sapiens GN=DNM2 PE=1 SV=2) HSP 1 Score: 53.9138 bits (128), Expect = 1.707e-7 Identity = 36/118 (30.51%), Postives = 54/118 (45.76%), Query Frame = -3 Query: 13 FDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPTLAHEKSLADIQAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGL 366 D P + VVG Q+ GKS+++E +G F G G TRRP+ L + + + S +++ IEAE R+ S I ++V H NLT+ID PG+ Sbjct: 29 LDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIFSKTEHAEFLHCKS------KKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGI 140
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy Swiss-Prot
Match: DRP1C_ARATH (Dynamin-related protein 1C OS=Arabidopsis thaliana GN=DRP1C PE=1 SV=2) HSP 1 Score: 53.5286 bits (127), Expect = 1.933e-7 Identity = 40/122 (32.79%), Postives = 57/122 (46.72%), Query Frame = -3 Query: 1 PAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPTLAHEKSLADIQAY---IEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGLIAPA 357 P V VVG Q+ GKS+++E+++G F G G TRRP+ L + + A +K AD A IE E R+ + Q S I + + + NLT+ID PGL A Sbjct: 36 PTVAVVGGQSSGKSSVLESVVGRDFLPRGSGIVTRRPLVLQLHKTEDGTTEYAEFLH------APKKRFADFAAVRKEIEDETDRITGKSKQISNIPIQLSIYSPNVVNLTLIDLPGLTKVA 151
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy Swiss-Prot
Match: DYN2_MOUSE (Dynamin-2 OS=Mus musculus GN=Dnm2 PE=1 SV=2) HSP 1 Score: 53.5286 bits (127), Expect = 2.476e-7 Identity = 36/118 (30.51%), Postives = 54/118 (45.76%), Query Frame = -3 Query: 13 FDAPAVLVVGHQTDGKSALVEALMGFQFNHVGGGTKTRRPITLHMSYDPLCDVPLCYLVSDDDPTLAHEKSLADIQAYIEAENMRLEREPCQFSAKEIIIKVKYKHCPNLTIIDTPGL 366 D P + VVG Q+ GKS+++E +G F G G TRRP+ L + + + S +++ IEAE R+ S I ++V H NLT+ID PG+ Sbjct: 29 LDLPQIAVVGGQSAGKSSVLENFVGRDFLPRGSGIVTRRPLILQLIFSKTEYAEFLHCKS------KKFTDFDEVRQEIEAETDRVTGTNKGISPVPINLRVYSPHVLNLTLIDLPGI 140 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0000546 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 16
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Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0000546 ID=g.arboreum_cottongen_reftransV1_0000546; Name=g.arboreum_cottongen_reftransV1_0000546; organism=Gossypium arboreum; type=contig; length=557bpback to top |