g.arboreum_cottongen_reftransV1_0021259, g.arboreum_cottongen_reftransV1_0021259 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A0B0NU41_GOSAR (Methylcrotonoyl-CoA carboxylase subunit alpha, mitochondrial OS=Gossypium arboreum GN=F383_17786 PE=4 SV=1) HSP 1 Score: 700.279 bits (1806), Expect = 0.000e+0 Identity = 331/331 (100.00%), Postives = 331/331 (100.00%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTK 995 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTK Sbjct: 295 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTK 625 HSP 2 Score: 198.749 bits (504), Expect = 1.143e-50 Identity = 100/100 (100.00%), Postives = 100/100 (100.00%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIKAQE 1752 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIKAQE Sbjct: 642 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIKAQE 741
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A0D2RVB0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G077800 PE=4 SV=1) HSP 1 Score: 676.011 bits (1743), Expect = 0.000e+0 Identity = 325/354 (91.81%), Postives = 330/354 (93.22%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTKVSMFSTTIFNVQCYDHMTDSVNL 1064 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQI VANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIE H DDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGD SLLPIWY HPPFRVNHHAQRTMEFE ENEYESSSSKPLMLSITY PDGNYFIQHQQIGEN HILEVKASNLGNDNFIVE+DGLTMNVSLAVYTK + I+N + H + L Sbjct: 294 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIHVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIERHKDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDSSLLPIWYTHPPFRVNHHAQRTMEFECENEYESSSSKPLMLSITYRPDGNYFIQHQQIGENDAHILEVKASNLGNDNFIVEADGLTMNVSLAVYTKGQIKHIHIWNGPHHHHFRQKLGL 647 HSP 2 Score: 192.971 bits (489), Expect = 1.072e-48 Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIKAQE 1752 FRQKLGLDLSDE+ETQHKTSFETTSHPPGTVVAPMAGLVVKVLVE+GAKVEAGQ VLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFR+KAQE Sbjct: 641 FRQKLGLDLSDEDETQHKTSFETTSHPPGTVVAPMAGLVVKVLVENGAKVEAGQPVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRVKAQE 740
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A0D2MV98_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G077800 PE=4 SV=1) HSP 1 Score: 675.626 bits (1742), Expect = 0.000e+0 Identity = 325/354 (91.81%), Postives = 330/354 (93.22%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTKVSMFSTTIFNVQCYDHMTDSVNL 1064 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQI VANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIE H DDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGD SLLPIWY HPPFRVNHHAQRTMEFE ENEYESSSSKPLMLSITY PDGNYFIQHQQIGEN HILEVKASNLGNDNFIVE+DGLTMNVSLAVYTK + I+N + H + L Sbjct: 294 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIHVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIERHKDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDSSLLPIWYTHPPFRVNHHAQRTMEFECENEYESSSSKPLMLSITYRPDGNYFIQHQQIGENDAHILEVKASNLGNDNFIVEADGLTMNVSLAVYTKGQIKHIHIWNGPHHHHFRQKLGL 647 HSP 2 Score: 187.193 bits (474), Expect = 8.454e-47 Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 FRQKLGLDLSDE+ETQHKTSFETTSHPPGTVVAPMAGLVVKVLVE+GAKVEAGQ VLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFR+K Sbjct: 641 FRQKLGLDLSDEDETQHKTSFETTSHPPGTVVAPMAGLVVKVLVENGAKVEAGQPVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRVK 737
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A0D2QTX2_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G077800 PE=4 SV=1) HSP 1 Score: 674.855 bits (1740), Expect = 0.000e+0 Identity = 325/354 (91.81%), Postives = 330/354 (93.22%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTKVSMFSTTIFNVQCYDHMTDSVNL 1064 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQI VANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIE H DDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGD SLLPIWY HPPFRVNHHAQRTMEFE ENEYESSSSKPLMLSITY PDGNYFIQHQQIGEN HILEVKASNLGNDNFIVE+DGLTMNVSLAVYTK + I+N + H + L Sbjct: 294 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIHVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIERHKDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDSSLLPIWYTHPPFRVNHHAQRTMEFECENEYESSSSKPLMLSITYRPDGNYFIQHQQIGENDAHILEVKASNLGNDNFIVEADGLTMNVSLAVYTKGQIKHIHIWNGPHHHHFRQKLGL 647 HSP 2 Score: 126.716 bits (317), Expect = 6.368e-27 Identity = 62/65 (95.38%), Postives = 64/65 (98.46%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKME 1647 FRQKLGLDLSDE+ETQHKTSFETTSHPPGTVVAPMAGLVVKVLVE+GAKVEAGQ VLVLEAMKME Sbjct: 641 FRQKLGLDLSDEDETQHKTSFETTSHPPGTVVAPMAGLVVKVLVENGAKVEAGQPVLVLEAMKME 705
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A0D2R0U0_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G077800 PE=4 SV=1) HSP 1 Score: 674.855 bits (1740), Expect = 0.000e+0 Identity = 325/354 (91.81%), Postives = 330/354 (93.22%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTKVSMFSTTIFNVQCYDHMTDSVNL 1064 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQI VANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIE H DDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGD SLLPIWY HPPFRVNHHAQRTMEFE ENEYESSSSKPLMLSITY PDGNYFIQHQQIGEN HILEVKASNLGNDNFIVE+DGLTMNVSLAVYTK + I+N + H + L Sbjct: 294 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIHVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIERHKDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDSSLLPIWYTHPPFRVNHHAQRTMEFECENEYESSSSKPLMLSITYRPDGNYFIQHQQIGENDAHILEVKASNLGNDNFIVEADGLTMNVSLAVYTKGQIKHIHIWNGPHHHHFRQKLGL 647 HSP 2 Score: 186.808 bits (473), Expect = 9.283e-47 Identity = 93/97 (95.88%), Postives = 96/97 (98.97%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 FRQKLGLDLSDE+ETQHKTSFETTSHPPGTVVAPMAGLVVKVLVE+GAKVEAGQ VLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFR+K Sbjct: 641 FRQKLGLDLSDEDETQHKTSFETTSHPPGTVVAPMAGLVVKVLVENGAKVEAGQPVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRVK 737
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A0D2P8L7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_004G077800 PE=4 SV=1) HSP 1 Score: 595.504 bits (1534), Expect = 0.000e+0 Identity = 282/289 (97.58%), Postives = 282/289 (97.58%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQ 869 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQI VANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIE H DDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGD SLLPIWY HPPFRVNHHAQRTMEFE ENEYESSSSKPLMLSITY PDGNYFIQ Sbjct: 294 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIHVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIERHKDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDSSLLPIWYTHPPFRVNHHAQRTMEFECENEYESSSSKPLMLSITYRPDGNYFIQ 582
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A061DPH8_THECC (Methylcrotonyl-CoA carboxylase alpha chai isoform 2 OS=Theobroma cacao GN=TCM_004300 PE=4 SV=1) HSP 1 Score: 595.504 bits (1534), Expect = 0.000e+0 Identity = 285/334 (85.33%), Postives = 302/334 (90.42%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTKVSM 1004 AVSAAKAVGYHNAGTVEFIVDT TG FYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQ QVPLSGH+FEARIYAENVPKGFLPATGVL HYHPVP SSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENR+AALVKLKDCL KFQVAG+PTNINFLQKLANH+AFEEG+VETHFIEHH DDLFVDPNNK I E+AY AARL A LVAACLCE+E S +KESH G PSLL IWYAH PFRVNHHAQ TME EWEN Y+SSSSKPLML+ITY DGNY IQH QIGEN H LEV+AS+LGN++F VE+DG+TM+VSLAVY K M Sbjct: 147 AVSAAKAVGYHNAGTVEFIVDTITGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQVQVPLSGHSFEARIYAENVPKGFLPATGVLRHYHPVPVSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRSAALVKLKDCLSKFQVAGVPTNINFLQKLANHRAFEEGDVETHFIEHHKDDLFVDPNNKEISEEAYDAARLSANLVAACLCEEEHSTLKESHPGGPSLLSIWYAHSPFRVNHHAQSTMELEWENGYDSSSSKPLMLAITYQRDGNYLIQHIQIGENSAHSLEVRASHLGNNSFRVEADGVTMHVSLAVYIKDKM 480 HSP 2 Score: 179.104 bits (453), Expect = 1.151e-44 Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 FRQKLGL+LSDE+ETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVE GQ VLVLEAMKMEHVVKATSGG V+GLKV AGQQVSDGSVLFR+K Sbjct: 494 FRQKLGLELSDEDETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEEGQPVLVLEAMKMEHVVKATSGGYVQGLKVTAGQQVSDGSVLFRVK 590
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: A0A061DXH9_THECC (Methylcrotonyl-CoA carboxylase alpha chai isoform 1 OS=Theobroma cacao GN=TCM_004300 PE=4 SV=1) HSP 1 Score: 587.415 bits (1513), Expect = 0.000e+0 Identity = 283/334 (84.73%), Postives = 300/334 (89.82%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTKVSM 1004 AVSAAKAVGYHNAGTVEFIVDT TG FYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQ QVPLSGH+FEARIYAENVPKGFLPATGVL HYHPVP SSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENR+AALVKLKDCL KFQVAG+PTNINFLQKLANH+AFEEG+VETHFIEHH DDLFVDPNNK I E+AY AARL A LVAACLCE+E S +KESH G PSLL IWYAH PFRVNHHAQ TME EWEN Y+SSSSKPLML+ITY DGNY I QIGEN H LEV+AS+LGN++F VE+DG+TM+VSLAVY K M Sbjct: 297 AVSAAKAVGYHNAGTVEFIVDTITGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQVQVPLSGHSFEARIYAENVPKGFLPATGVLRHYHPVPVSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRSAALVKLKDCLSKFQVAGVPTNINFLQKLANHRAFEEGDVETHFIEHHKDDLFVDPNNKEISEEAYDAARLSANLVAACLCEEEHSTLKESHPGGPSLLSIWYAHSPFRVNHHAQSTMELEWENGYDSSSSKPLMLAITYQRDGNYLI---QIGENSAHSLEVRASHLGNNSFRVEADGVTMHVSLAVYIKDKM 627 HSP 2 Score: 179.104 bits (453), Expect = 3.973e-44 Identity = 89/97 (91.75%), Postives = 93/97 (95.88%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 FRQKLGL+LSDE+ETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVE GQ VLVLEAMKMEHVVKATSGG V+GLKV AGQQVSDGSVLFR+K Sbjct: 641 FRQKLGLELSDEDETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEEGQPVLVLEAMKMEHVVKATSGGYVQGLKVTAGQQVSDGSVLFRVK 737
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: B9SFG9_RICCO (Acetyl-CoA carboxylase, putative OS=Ricinus communis GN=RCOM_0646250 PE=4 SV=1) HSP 1 Score: 523.087 bits (1346), Expect = 1.458e-171 Identity = 253/333 (75.98%), Postives = 284/333 (85.29%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLM--LSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTK 995 AVSAAKAVGY+NAGTVEFIVD +G FYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLP++Q QVPL GHAFE RIYAENV KGFLPATGVLHHY P+ SSTVRVETGVE+GD VSMHYDPMIAKLVVWGENRAAALVKLKDCL KFQVAG+PTNINFLQKLA+H +FE+GNVETHFIEHH DLF DPNN ++ ++AYS A+ A L+AACLCEK+ SA+KES G SL PIWY+HPPFRV+H A+ TMEFEW+NEY+SS SKPL LSITY PDGNY I+ +IG G L VKA +L + NF VE+DG++MNVSLA Y+K Sbjct: 298 AVSAAKAVGYYNAGTVEFIVDIVSGKFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPLTQSQVPLLGHAFETRIYAENVSKGFLPATGVLHHYRPIAVSSTVRVETGVEEGDTVSMHYDPMIAKLVVWGENRAAALVKLKDCLSKFQVAGVPTNINFLQKLASHTSFEDGNVETHFIEHHKQDLFTDPNNSMLAKEAYSNAKYSASLLAACLCEKQHSALKESPPGHSSLHPIWYSHPPFRVHHLARHTMEFEWDNEYDSSGSKPLTVALSITYLPDGNYLIELGEIGSCG---LVVKAMHLDDCNFRVEADGVSMNVSLAAYSK 627 HSP 2 Score: 151.754 bits (382), Expect = 6.513e-35 Identity = 74/97 (76.29%), Postives = 83/97 (85.57%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 FRQKLGLDLSD+++TQH T ET SHPPGTVVAPMAGLVVKVLV+DG+KVE GQ +LVLEAMKMEHVVKA G V GL+V AGQQ+SD S+LF IK Sbjct: 644 FRQKLGLDLSDDDKTQHMTDVETASHPPGTVVAPMAGLVVKVLVQDGSKVEEGQPILVLEAMKMEHVVKAPFTGYVRGLQVTAGQQISDNSLLFSIK 740
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Match: D7TE06_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_07s0151g00460 PE=4 SV=1) HSP 1 Score: 521.546 bits (1342), Expect = 5.194e-171 Identity = 252/331 (76.13%), Postives = 280/331 (84.59%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDLFVDPNNKVIYEDAYSAARLGAKLVAACLCEKERSAMKESHSGDPSLLPIWYAHPPFRVNHHAQRTMEFEWENEYESSSSKPLMLSITYHPDGNYFIQHQQIGENGVHILEVKASNLGNDNFIVESDGLTMNVSLAVYTK 995 AVSAAKAVGYHNAGTVEFIVDT +G FYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLP++Q QVPL GHAFEARIYAENV KGFLPATG+LHHY PVP SSTVRVETGVEQGD VSMHYDPMIAKLVVWGENRAAALVK+KDCL KFQVAGLPTNINFLQKLANH AFE G VETHFIEH DDLFVDP+N ++ +AY AA+ A L+AAC+CEKER +KES G S L IWYA+PPFRV+H A+RTME +W+NEY+SSSSK L SIT+ PDGNY I + GE EVK ++LGN +F VE DG++ +VSLAVY+K Sbjct: 291 AVSAAKAVGYHNAGTVEFIVDTISGQFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPMNQSQVPLLGHAFEARIYAENVSKGFLPATGILHHYRPVPVSSTVRVETGVEQGDTVSMHYDPMIAKLVVWGENRAAALVKMKDCLSKFQVAGLPTNINFLQKLANHWAFENGKVETHFIEHFKDDLFVDPSNLLLANEAYDAAKFSAVLIAACVCEKERCNLKESPPGGKSSLSIWYAYPPFRVHHSARRTMELDWDNEYDSSSSKLLTFSITFQPDGNYLI---ETGEENSPDWEVKVAHLGNSDFRVEVDGVSRDVSLAVYSK 618 HSP 2 Score: 149.058 bits (375), Expect = 5.195e-34 Identity = 73/97 (75.26%), Postives = 82/97 (84.54%), Query Frame = 1 Query: 1453 FRQKLGLDLSDENETQHKTSFETTSHPPGTVVAPMAGLVVKVLVEDGAKVEAGQAVLVLEAMKMEHVVKATSGGVVEGLKVGAGQQVSDGSVLFRIK 1743 FRQ++GL LS ++E QHK SFE TSHPPGTVVAPMAGLVVKVLV+DG VE GQ +LVLEAMKMEHVVKA SGG V GL+V AGQQVSDGS LF ++ Sbjct: 635 FRQRVGLQLSADDEAQHKPSFEATSHPPGTVVAPMAGLVVKVLVKDGTNVEEGQPILVLEAMKMEHVVKAPSGGHVHGLQVTAGQQVSDGSFLFSVQ 731
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: PYCA_ARCFU (Pyruvate carboxylase subunit A OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) GN=pycA PE=3 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 6.356e-42 Identity = 81/189 (42.86%), Postives = 120/189 (63.49%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHN 569 AV A+ +GY NAGT EF+ + G+FYF+E+N+RLQVEH +TE++ G D+V++QIR+A GE L Q+ V + GHA E RI AE+ P F P +G + HY P +RV++G+ G + YD MI+KL+ +GE R A+ ++K L ++ + G+ TNI F + N + F GN+ T F+E N Sbjct: 258 AVKGAREIGYTNAGTFEFLYEN--GNFYFLEINSRLQVEHTITEVVTGIDIVKYQIRIAYGEELRHGQEDVAIRGHAIECRINAED-PVNFYPRSGRILHYRS-PGGIGIRVDSGIHMGYRIPEEYDSMISKLIAYGETREEAIARMKRALYEYIIEGVETNIPFHFAVLNDEEFVRGNIHTKFVEERN 442
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: ACCC1_POPTR (Biotin carboxylase 1, chloroplastic OS=Populus trichocarpa GN=POPTRDRAFT_831870 PE=2 SV=1) HSP 1 Score: 163.696 bits (413), Expect = 8.666e-42 Identity = 88/192 (45.83%), Postives = 119/192 (61.98%), Query Frame = 3 Query: 3 AVSAAKAVGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHNDDL 578 AVSAA ++GY GTVEF++D + G FYFMEMNTR+QVEHPVTEMI DL+E QIRVA GE L Q+ + L GH+ E RI AE+ KGF P G + Y P VR+++ V VV YD ++ KL+VW R A+ ++K L + G+PT I++ + + + F+ GNV+T FI H +L Sbjct: 322 AVSAAASIGYIGVGTVEFLLDER-GSFYFMEMNTRIQVEHPVTEMISSVDLIEEQIRVAMGEKLRYKQEDIVLRGHSIECRINAEDAFKGFRPGPGRITAYLP-SGGPFVRMDSHVYPDYVVPPSYDSLLGKLIVWAPTREKAIERMKRALDDTIITGVPTTIDYHKLILEIEDFKNGNVDTAFIPKHEKEL 511
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: ACCC_ECO57 (Biotin carboxylase OS=Escherichia coli O157:H7 GN=accC PE=3 SV=1) HSP 1 Score: 162.155 bits (409), Expect = 1.153e-41 Identity = 79/179 (44.13%), Postives = 116/179 (64.80%), Query Frame = 3 Query: 24 VGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIE 560 +GY AGT EF+ + G FYF+EMNTR+QVEHPVTEMI G DL++ Q+R+A G+PL I Q++V + GHA E RI AE+ P FLP+ G + +H P VR E+ + G V +YD MI KL+ +GENR A+ ++K+ L + + G+ TN++ ++ N + F+ G H++E Sbjct: 267 IGYRGAGTFEFLFEN--GEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAED-PNTFLPSPGKITRFH-APGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLE 441
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: ACCC_ECOLI (Biotin carboxylase OS=Escherichia coli (strain K12) GN=accC PE=1 SV=2) HSP 1 Score: 162.155 bits (409), Expect = 1.164e-41 Identity = 79/179 (44.13%), Postives = 116/179 (64.80%), Query Frame = 3 Query: 24 VGYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIE 560 +GY AGT EF+ + G FYF+EMNTR+QVEHPVTEMI G DL++ Q+R+A G+PL I Q++V + GHA E RI AE+ P FLP+ G + +H P VR E+ + G V +YD MI KL+ +GENR A+ ++K+ L + + G+ TN++ ++ N + F+ G H++E Sbjct: 267 IGYRGAGTFEFLFEN--GEFYFIEMNTRIQVEHPVTEMITGVDLIKEQLRIAAGQPLSIKQEEVHVRGHAVECRINAED-PNTFLPSPGKITRFH-APGGFGVRWESHIYAGYTVPPYYDSMIGKLICYGENRDVAIARMKNALQELIIDGIKTNVDLQIRIMNDENFQHGGTNIHYLE 441
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Match: ACCC1_BACSU (Biotin carboxylase 1 OS=Bacillus subtilis (strain 168) GN=accC1 PE=3 SV=3) HSP 1 Score: 160.614 bits (405), Expect = 3.524e-41 Identity = 81/181 (44.75%), Postives = 111/181 (61.33%), Query Frame = 3 Query: 27 GYHNAGTVEFIVDTKTGHFYFMEMNTRLQVEHPVTEMIVGQDLVEWQIRVANGEPLPISQDQVPLSGHAFEARIYAENVPKGFLPATGVLHHYHPVPPSSTVRVETGVEQGDVVSMHYDPMIAKLVVWGENRAAALVKLKDCLLKFQVAGLPTNINFLQKLANHKAFEEGNVETHFIEHHN 569 GY AGTVEFI D +YFMEMNTR+QVEHPVTEM+ G DL++ QI+VA+G L + Q+ V G A E RI AEN K F+P+ G + Y P P VRV++ G + +YD MIAK++ +G+ R A+ ++K L +F + G+ T I F KL H+ F G T F+E ++ Sbjct: 267 GYTGAGTVEFIYDYNEQRYYFMEMNTRIQVEHPVTEMVTGTDLIKEQIKVASGMELSLKQEDVEFEGWAIECRINAENPSKNFMPSPGEIKMYLP-PGGLGVRVDSAAYPGYSIPPYYDSMIAKVITYGKTRDEAIARMKRALSEFVIEGIETTIPFHLKLLEHETFVSGEFNTKFLETYD 446 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0021259 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0021259 ID=g.arboreum_cottongen_reftransV1_0021259; Name=g.arboreum_cottongen_reftransV1_0021259; organism=Gossypium arboreum; type=contig; length=2207bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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