g.arboreum_cottongen_reftransV1_0019462, g.arboreum_cottongen_reftransV1_0019462 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0019462
Unique Nameg.arboreum_cottongen_reftransV1_0019462
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length1368
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr4chromosomeg.arboreum_cottongen_reftransV1_0019462:1..1368 .
Chr4:100058638..100062458 -
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A0D2NU86_GOSRA (S-acyltransferase OS=Gossypium raimondii GN=B456_003G004400 PE=3 SV=1)

HSP 1 Score: 406.371 bits (1043), Expect = 5.454e-136
Identity = 241/269 (89.59%), Postives = 253/269 (94.05%), Query Frame = -2
Query:  114 KKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEK 920
            KKEPWYTALYLLLL ATLVQYFITSSSSPGYV DVMRAVNETNVI QKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTS+RSC CSYCNVEQPPRAKHC+DCDKCVL FDHHC+WLG+C+GQ NHCKFWWYICEE+ALCLWTGILYI YLKANISRAWW DAI ILLLI LSI I+FLLLLL FHSYL+LTNQTTYELVRRRRIPYLR IPERVYPFSKG+C NLY+FCC  S+IYSLEPLPS+QELEEK
Sbjct:   64 KKEPWYTALYLLLLFATLVQYFITSSSSPGYVFDVMRAVNETNVICQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSIRSCTCSYCNVEQPPRAKHCHDCDKCVLQFDHHCLWLGSCVGQDNHCKFWWYICEETALCLWTGILYIMYLKANISRAWWKDAIMILLLIALSIVIIFLLLLLLFHSYLVLTNQTTYELVRRRRIPYLRRIPERVYPFSKGICRNLYNFCCVRSSIYSLEPLPSSQELEEK 332          

HSP 2 Score: 107.457 bits (267), Expect = 5.454e-136
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = -1
Query:  913 VTMVIGICRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKR 1110
            +T V+GICRSF DRAL R +HCFPCLSDPARRSS  LKVTLVMLHL++VGILF+FD DLI+ TKK 
Sbjct:    1 MTTVMGICRSFHDRALARFFHCFPCLSDPARRSSWGLKVTLVMLHLIFVGILFVFDGDLIETTKKE 66          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: M5W2M3_PRUPE (S-acyltransferase OS=Prunus persica GN=PRUPE_ppa007948mg PE=3 SV=1)

HSP 1 Score: 406.371 bits (1043), Expect = 1.409e-135
Identity = 219/286 (76.57%), Postives = 253/286 (88.46%), Query Frame = -2
Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K K+EPWYTA+YL L +ATLVQYF+TS+SSPG+V+D MRAVNE+N I++K+ +ASKQPASS+NG++ V +EGSQ  R+  GSN +SWTKLVMD+YPPGTSVRS  CSYCNVEQPPR+KHC+DCDKCVL FDHHCVWLGTCIG GNHCKFWWYICEE++LCLWTGI+YITYLK NIS AWW DAI ILLL+ LSI I+FLLLLL FHSYL+LTNQTTYELVRRRRIPYLRG+PERVYPFSKG C NLY+FCC  S+ Y +E LP+AQELEEKSRPY+  DV+TCRCC
Sbjct:   64 KTKREPWYTAIYLTLFVATLVQYFVTSASSPGFVLDAMRAVNESNTIFRKALVASKQPASSKNGNVVVTVEGSQMARSLLGSNATSWTKLVMDLYPPGTSVRSLTCSYCNVEQPPRSKHCHDCDKCVLQFDHHCVWLGTCIGLGNHCKFWWYICEETSLCLWTGIMYITYLKENISSAWWKDAIVILLLVTLSISIIFLLLLLLFHSYLVLTNQTTYELVRRRRIPYLRGVPERVYPFSKGACRNLYEFCCLRSSKYRMERLPTAQELEEKSRPYSICDVVTCRCC 349          

HSP 2 Score: 89.7373 bits (221), Expect = 1.994e-16
Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = -1
Query:  847 VIGICRSFRD---RALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1101
            ++ +CRS      R LDRCY   PCLSDPARRS+L LKV LVMLHL+YVG+LFLFD  LI+KTK+      +  +  + ++ T++ YF
Sbjct:    3 IVNVCRSLPGSSCRPLDRCYRFLPCLSDPARRSALGLKVALVMLHLIYVGMLFLFDGGLIEKTKREPW---YTAIYLTLFVATLVQYF 87          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: B9SAK9_RICCO (S-acyltransferase OS=Ricinus communis GN=RCOM_0728630 PE=3 SV=1)

HSP 1 Score: 402.134 bits (1032), Expect = 5.142e-134
Identity = 215/286 (75.17%), Postives = 247/286 (86.36%), Query Frame = -2
Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K ++EPWY  LYLLL +ATLVQYF T+ SSPGYV+D MR +N+ N  + K+S+ SKQPASS+NGSL + ++ S+SG+   GSN +SWTK+V+DMYPPGTSVR+  CSYCNVEQPPRAKHC+DCDKCVL FDHHCVWLGTCIGQGNHC+FWWYICEE+ LCLWTGILYI YLKANI+RAWW DAI I+LL+ LSI  +FLLLLL FHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKG C NLY+FCC  S++Y+LE LP+  ELEEKSRPYTCLD LTCRCC
Sbjct:   61 KARQEPWYIVLYLLLFVATLVQYFATACSSPGYVLDAMRGLNDKNAAFAKASIPSKQPASSKNGSLIITVDESRSGKTSSGSNITSWTKIVLDMYPPGTSVRTLTCSYCNVEQPPRAKHCHDCDKCVLQFDHHCVWLGTCIGQGNHCRFWWYICEETTLCLWTGILYIAYLKANITRAWWKDAIMIILLVTLSIASIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKGACRNLYEFCCVRSSLYNLERLPTPIELEEKSRPYTCLDFLTCRCC 346          

HSP 2 Score: 79.7221 bits (195), Expect = 4.256e-13
Identity = 40/74 (54.05%), Postives = 53/74 (71.62%), Query Frame = -1
Query:  847 ALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1068
            AL  CY  FPCL+DPARRS+L LKV LVMLHL+YVGILF+FD DLI+K ++      +I +    ++ T++ YF
Sbjct:   14 ALHGCYRLFPCLADPARRSALGLKVALVMLHLIYVGILFIFDDDLIEKARQEPW---YIVLYLLLFVATLVQYF 84          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A068TZX2_COFCA (S-acyltransferase OS=Coffea canephora GN=GSCOC_T00036995001 PE=3 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 3.596e-133
Identity = 211/286 (73.78%), Postives = 247/286 (86.36%), Query Frame = -2
Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K K++PWYTA+YL LL+ATL QYF+TS++SPGYV++ MR VNET+ + ++ S+ASKQPASS NGSL V ++  Q GRN  GSN +SWTK+VMDMYPPGTSVR+  CSYCNV QPPRAKHC+DCDKCVL FDHHCVWLGTCIGQ NHC+FWWYICEE+ALCLWTGILYI+YLK+NI++AWW D I ILLL  L + ++FL+LLL FHSYLI+TNQTTYELVRRRRIPYLRGIPERVYPFS+GVC NLY+FC   S  Y +E LP+AQELEEK+RPYTCLD LTCRCC
Sbjct:   63 KTKQQPWYTAIYLSLLVATLAQYFLTSNTSPGYVLEAMRVVNETDALVRRKSVASKQPASSNNGSLVVTVDADQLGRNLLGSNATSWTKVVMDMYPPGTSVRTWTCSYCNVVQPPRAKHCHDCDKCVLQFDHHCVWLGTCIGQNNHCRFWWYICEETALCLWTGILYISYLKSNITKAWWVDVIMILLLATLFVSLIFLVLLLLFHSYLIMTNQTTYELVRRRRIPYLRGIPERVYPFSQGVCRNLYNFCLARSTYYKMERLPTAQELEEKARPYTCLDALTCRCC 348          

HSP 2 Score: 81.2629 bits (199), Expect = 1.493e-13
Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = -1
Query:  847 GICRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1095
            G  R   DR  DRC   FPCLSDPARRS+L LK+ LV+LHL+YV ILF+FD D I+KTK++     +  +  S  + T+  YF
Sbjct:    7 GSLRDTWDRFFDRCSRFFPCLSDPARRSALCLKLALVVLHLIYVSILFIFDKDFIEKTKQQPW---YTAIYLSLLVATLAQYF 86          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: U5GH79_POPTR (S-acyltransferase OS=Populus trichocarpa GN=POPTR_0005s10680g PE=3 SV=1)

HSP 1 Score: 399.053 bits (1024), Expect = 8.776e-133
Identity = 215/287 (74.91%), Postives = 246/287 (85.71%), Query Frame = -2
Query:   69 KRKKEPWXXX-XXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K K+EPW    LYLLL +ATL+QYF+ S SSPGYV+D MR V+E N +++K+SM SKQPASS+NGSL + +EGSQS RN   SN +SWTKLV+DMYPPGTSVR+  C++CNVEQPPRAKHC+DCD+CVL FDHHCVWLG CIG GNHC+FWWYI EE+ALC+WTGILYITYLKANISRAWW D I ILLL+ LS  ++FLLLLL FHSYLILTNQTTYEL+RRRRIPYLRGIPERVYPFS+GVC NLY FCC  S+IYSLE LP+A ELE+KSRPYTCL  LTCRCC
Sbjct:   56 KTKQEPWSYTGLYLLLFVATLIQYFVASYSSPGYVLDAMREVSEKNSLFRKASMLSKQPASSKNGSLVITVEGSQSERNIPESNVTSWTKLVLDMYPPGTSVRTLSCTFCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGACIGWGNHCRFWWYIFEETALCIWTGILYITYLKANISRAWWKDVIMILLLVTLSFAVIFLLLLLIFHSYLILTNQTTYELIRRRRIPYLRGIPERVYPFSEGVCRNLYKFCCARSSIYSLERLPTAMELEDKSRPYTCLGFLTCRCC 342          

HSP 2 Score: 73.9442 bits (180), Expect = 3.551e-11
Identity = 36/70 (51.43%), Postives = 51/70 (72.86%), Query Frame = -1
Query:  847 CYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1056
            C+   PCL+DPA RSSL LK  LV+LH+VY GILFLFDSDLI+KTK+    +  ++++   ++ T++ YF
Sbjct:   13 CHRFVPCLADPATRSSLGLKAALVVLHIVYAGILFLFDSDLIEKTKQEPWSYTGLYLLL--FVATLIQYF 80          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A0D2QKV1_GOSRA (S-acyltransferase OS=Gossypium raimondii GN=B456_003G004400 PE=3 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 1.858e-132
Identity = 220/249 (88.35%), Postives = 234/249 (93.98%), Query Frame = -2
Query:   69 MRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 815
            MRAVNETNVI QKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTS+RSC CSYCNVEQPPRAKHC+DCDKCVL FDHHC+WLG+C+GQ NHCKFWWYICEE+ALCLWTGILYI YLKANISRAWW DAI ILLLI LSI I+FLLLLL FHSYL+LTNQTTYELVRRRRIPYLR IPERVYPFSKG+C NLY+FCC  S+IYSLEPLPS+QELEEK+RPYTCLD+L CRCC
Sbjct:    1 MRAVNETNVICQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSIRSCTCSYCNVEQPPRAKHCHDCDKCVLQFDHHCLWLGSCVGQDNHCKFWWYICEETALCLWTGILYIMYLKANISRAWWKDAIMILLLIALSIVIIFLLLLLLFHSYLVLTNQTTYELVRRRRIPYLRRIPERVYPFSKGICRNLYNFCCVRSSIYSLEPLPSSQELEEKARPYTCLDILACRCC 249          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A067G7N3_CITSI (S-acyltransferase OS=Citrus sinensis GN=CISIN_1g018884mg PE=3 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 1.605e-131
Identity = 210/286 (73.43%), Postives = 244/286 (85.31%), Query Frame = -2
Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K K EPWY   YLLL +ATLVQYFITS SSPGYV+D MR  NE N ++QK S  SKQPASS+NG++ + +EGS+ GR+F GSN +SWTKLV+D+YPPGTS+RS  CSYCNVEQPPRAKHC+DCD+CVL FDHHCVWLGTC+G  NHC+FWW+ICEE+ALCLWTG+LY+ YLKANI+ AWW D I I+LLI L+I ++FLLLLL FHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFS GVC NLY  CC  +++Y+LE LP+AQE+EEK RPYTCLD LTCRCC
Sbjct:   63 KTKHEPWYITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMVITMEGSRPGRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIVLLIILAISLIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLYKLCCVKASVYNLERLPTAQEIEEKCRPYTCLDFLTCRCC 348          

HSP 2 Score: 81.2629 bits (199), Expect = 1.441e-13
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = -1
Query:  847 MVIGICRSFRDR---ALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1104
            M+  + R  RD     LDRC+   PCL+DPARRSSL LK  LV LHLV+VG++FLFDS+LI+KTK       F  ++   ++ T++ YF
Sbjct:    1 MLSAVSRPIRDSCAPVLDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPWYITFYLLL---FVATLVQYF 86          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A059AIM2_EUCGR (S-acyltransferase OS=Eucalyptus grandis GN=EUGRSUZ_J02517 PE=3 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 4.254e-127
Identity = 210/286 (73.43%), Postives = 240/286 (83.92%), Query Frame = -2
Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K +KEPWY ALYLLL +ATL+QYF+T+ SSPGYV+DVMRAVNE N ++  S    +Q ASS+NG   V  +G Q GRN  GSN +SW+K+VMD+YP G S R+  CSYCNVEQPPRAKHC+DCD+CVL FDHHCVWLGTCIGQGNHC+FWWYICEE+ALC+WT ILYITYL A+ISRAWW DA+ ILLLI LSI ++FL LLL FHSYL+LTNQTTYELVRRRRIPYLRGIPERVYPFSKG C NLY FCC   +IY LE LP+AQELEEKS+P+TCLD LTCRCC
Sbjct:   58 KARKEPWYIALYLLLFVATLIQYFVTACSSPGYVLDVMRAVNEANAMF-TSRFKQRQTASSKNGGFVVSSDGDQLGRNLLGSNSTSWSKMVMDLYPLGMSTRTLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCIGQGNHCRFWWYICEETALCIWTVILYITYLTADISRAWWKDAVMILLLIFLSISLIFLFLLLLFHSYLVLTNQTTYELVRRRRIPYLRGIPERVYPFSKGACRNLYHFCCARGSIYDLERLPTAQELEEKSKPFTCLDALTCRCC 342          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: V4SI84_9ROSI (S-acyltransferase OS=Citrus clementina GN=CICLE_v10025980mg PE=3 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 1.539e-126
Identity = 214/286 (74.83%), Postives = 248/286 (86.71%), Query Frame = -2
Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K K EPWY   YLLL +ATLVQYFITS SSPGYV+D MR  NE N ++QK S  SKQPASS+NG++ + +EGS+SGR+F GSN +SWTKLV+D+YPPGTS+RS  CSYCNVEQPPRAKHC+DCD+CVL FDHHCVWLGTC+G GNHC+FWW+ICEE+ALCLWTG+LY+ YLKANI+ AWW D I I+LLI L+IF++FLLLLL FHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFS GVC NLY  CC  +++Y+LE LP+AQE+EEKSRPYTCLD LTCRCC
Sbjct:   63 KTKHEPWYITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMVITMEGSRSGRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIMLLIILAIFLIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLYKLCCVKASVYNLERLPTAQEIEEKSRPYTCLDFLTCRCC 348          

HSP 2 Score: 77.7962 bits (190), Expect = 2.265e-12
Identity = 42/89 (47.19%), Postives = 57/89 (64.04%), Query Frame = -1
Query:  847 MVIGICRSFRDR---ALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1104
            M+  + R  RD     LDRC+   PCL+DPARRSSL LK  LV LHLV+VG++FLF S+LI+KTK       F  ++   ++ T++ YF
Sbjct:    1 MLSAVSRPIRDSCAPVLDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFYSELIEKTKHEPWYITFYLLL---FVATLVQYF 86          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A059ARF7_EUCGR (S-acyltransferase OS=Eucalyptus grandis GN=EUGRSUZ_I02283 PE=3 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 3.815e-124
Identity = 205/284 (72.18%), Postives = 239/284 (84.15%), Query Frame = -2
Query:   69 KKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 920
            +++PWY ALYLLL +A L+QYF+T+ SSPGYV+D M+A NE N ++ +S  ASK PASS+NGSL V ++ +QSGRN  GS  SSW+K+VM+ YP GTS+R+  CSYCN+EQPPRAKHC+DCDKCVL FDHHCVWLGTCIGQGNHC+FWWYI EE+ALCLWTGILYITYLK +IS AWW D I ILLLI L +  +FLLLLL FHSYL+LTNQTTYELVRRRRIPYLRG+PE V+PFSKGVC NLY FCC  S IY +E LP+A E+EEK RPYTCLDVLTCRCC
Sbjct:   66 RRQPWYIALYLLLFVAALIQYFVTAGSSPGYVLDAMKAYNEANSLFIRSPTASKHPASSKNGSLTVTVDINQSGRNSLGS--SSWSKMVMEFYPLGTSIRTMTCSYCNIEQPPRAKHCHDCDKCVLQFDHHCVWLGTCIGQGNHCRFWWYIFEETALCLWTGILYITYLKTSISGAWWKDLIMILLLISLVVLFIFLLLLLLFHSYLVLTNQTTYELVRRRRIPYLRGLPENVFPFSKGVCRNLYRFCCAQSTIYDMERLPTAFEVEEKLRPYTCLDVLTCRCC 347          

HSP 2 Score: 88.9669 bits (219), Expect = 3.598e-16
Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = -1
Query:  880 GICR---SFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTL---VHCFIFVVA 1095
            G+C      RDRALDRC   FPCL+DPARRSSLVLKV LV LHLVY GILF FD DLI+ T+++     ++  +FV A
Sbjct:    5 GVCAPIAELRDRALDRCSRWFPCLADPARRSSLVLKVALVALHLVYAGILFSFDEDLIENTRRQPWYIALYLLLFVAA 82          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC9_PONAB (Palmitoyltransferase ZDHHC9 OS=Pongo abelii GN=ZDHHC9 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.432e-11
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = -2
Query:  414 CSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYL 611
            C  C + +PPRA HC  CD CV  FDHHC W+G C+G+ N+  F+ +I   S L ++     I Y+
Sbjct:  141 CYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYV 206          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC9_HUMAN (Palmitoyltransferase ZDHHC9 OS=Homo sapiens GN=ZDHHC9 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.485e-11
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = -2
Query:  414 CSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYL 611
            C  C + +PPRA HC  CD CV  FDHHC W+G C+G+ N+  F+ +I   S L ++     I Y+
Sbjct:  141 CYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYV 206          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC9_BOVIN (Palmitoyltransferase ZDHHC9 OS=Bos taurus GN=ZDHHC9 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.572e-11
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = -2
Query:  414 CSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYL 611
            C  C + +PPRA HC  CD CV  FDHHC W+G C+G+ N+  F+ +I   S L ++     I Y+
Sbjct:  141 CYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYV 206          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: PFA3_GIBZE (Palmitoyltransferase PFA3 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PFA3 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.412e-11
Identity = 27/59 (45.76%), Postives = 32/59 (54.24%), Query Frame = -2
Query:  438 ICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWT 614
             C  C   +P RA HC  C +CVL  DHHC WL TCIG  NH  F  ++   S  C W+
Sbjct:  111 FCKKCQARKPDRAHHCSTCRRCVLKMDHHCPWLATCIGLRNHKAFLLFLIYTSLFCFWS 169          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC5_PONAB (Palmitoyltransferase ZDHHC5 OS=Pongo abelii GN=ZDHHC5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.558e-11
Identity = 32/88 (36.36%), Postives = 45/88 (51.14%), Query Frame = -2
Query:  381 GTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWT---GILYITYLKANISRAWWND 635
            G  VR   C+ C   +PPR  HC  CD CV  FDHHC W+  CIG+ N+  F+ ++   +A  +     G+LY+ Y    +S     D
Sbjct:   98 GIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYVLYHIEELSGVRTAD 185          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ERFB_ASHGO (Palmitoyltransferase ERF2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ERF2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.649e-11
Identity = 29/62 (46.77%), Postives = 36/62 (58.06%), Query Frame = -2
Query:  441 VRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLW 626
            VR   C+ C + +PPRA HC  CD C+L FDHHC WL  CIGQ NH  F  ++       +W
Sbjct:  182 VRLKYCTTCRIWRPPRASHCAVCDSCILSFDHHCDWLNNCIGQRNHRYFLAFLFSSVLSSIW 243          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC5_CANFA (Palmitoyltransferase ZDHHC5 OS=Canis familiaris GN=ZDHHC5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.248e-11
Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = -2
Query:  399 GTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWT---GILYITYLKANIS 635
            G  VR   C+ C   +PPR  HC  CD CV  FDHHC W+  CIG+ N+  F+ ++   +A  +     G+LY+ Y    +S
Sbjct:   98 GIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYVLYHMEELS 179          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDH17_MOUSE (Palmitoyltransferase ZDHHC17 OS=Mus musculus GN=Zdhhc17 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.976e-11
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = -2
Query:  468 KLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYI 662
            K ++++   G+   S  CS C + +P R+KHC  C++C+  FDHHC W+G C+G GNH  F  Y+
Sbjct:  422 KTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYL 486          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDH17_HUMAN (Palmitoyltransferase ZDHHC17 OS=Homo sapiens GN=ZDHHC17 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.976e-11
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = -2
Query:  468 KLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYI 662
            K ++++   G+   S  CS C + +P R+KHC  C++C+  FDHHC W+G C+G GNH  F  Y+
Sbjct:  422 KTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYL 486          
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC5_PANTR (Palmitoyltransferase ZDHHC5 OS=Pan troglodytes GN=ZDHHC5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.403e-11
Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = -2
Query:  417 GTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWT---GILYITY 635
            G  VR   C+ C   +PPR  HC  CD CV  FDHHC W+  CIG+ N+  F+ ++   +A  +     G+LY+ Y
Sbjct:   98 GIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYVLY 173          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0D2NU86_GOSRA5.454e-13689.59S-acyltransferase OS=Gossypium raimondii GN=B456_0... [more]
M5W2M3_PRUPE1.409e-13576.57S-acyltransferase OS=Prunus persica GN=PRUPE_ppa00... [more]
B9SAK9_RICCO5.142e-13475.17S-acyltransferase OS=Ricinus communis GN=RCOM_0728... [more]
A0A068TZX2_COFCA3.596e-13373.78S-acyltransferase OS=Coffea canephora GN=GSCOC_T00... [more]
U5GH79_POPTR8.776e-13374.91S-acyltransferase OS=Populus trichocarpa GN=POPTR_... [more]
A0A0D2QKV1_GOSRA1.858e-13288.35S-acyltransferase OS=Gossypium raimondii GN=B456_0... [more]
A0A067G7N3_CITSI1.605e-13173.43S-acyltransferase OS=Citrus sinensis GN=CISIN_1g01... [more]
A0A059AIM2_EUCGR4.254e-12773.43S-acyltransferase OS=Eucalyptus grandis GN=EUGRSUZ... [more]
V4SI84_9ROSI1.539e-12674.83S-acyltransferase OS=Citrus clementina GN=CICLE_v1... [more]
A0A059ARF7_EUCGR3.815e-12472.18S-acyltransferase OS=Eucalyptus grandis GN=EUGRSUZ... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
ZDHC9_PONAB1.432e-1142.42Palmitoyltransferase ZDHHC9 OS=Pongo abelii GN=ZDH... [more]
ZDHC9_HUMAN1.485e-1142.42Palmitoyltransferase ZDHHC9 OS=Homo sapiens GN=ZDH... [more]
ZDHC9_BOVIN1.572e-1142.42Palmitoyltransferase ZDHHC9 OS=Bos taurus GN=ZDHHC... [more]
PFA3_GIBZE5.412e-1145.76Palmitoyltransferase PFA3 OS=Gibberella zeae (stra... [more]
ZDHC5_PONAB7.558e-1136.36Palmitoyltransferase ZDHHC5 OS=Pongo abelii GN=ZDH... [more]
ERFB_ASHGO7.649e-1146.77Palmitoyltransferase ERF2 OS=Ashbya gossypii (stra... [more]
ZDHC5_CANFA8.248e-1137.80Palmitoyltransferase ZDHHC5 OS=Canis familiaris GN... [more]
ZDH17_MOUSE8.976e-1141.54Palmitoyltransferase ZDHHC17 OS=Mus musculus GN=Zd... [more]
ZDH17_HUMAN8.976e-1141.54Palmitoyltransferase ZDHHC17 OS=Homo sapiens GN=ZD... [more]
ZDHC5_PANTR9.403e-1139.47Palmitoyltransferase ZDHHC5 OS=Pan troglodytes GN=... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001594Zinc finger, DHHC-type, palmitoyltransferasePFAMPF01529zf-DHHCcoord: 91..209
e-value: 1.2E-30
score: 106.3
IPR001594Zinc finger, DHHC-type, palmitoyltransferasePROSITEPS50216ZF_DHHCcoord: 92..142
score: 22.267
NoneNo IPR availablePANTHERPTHR22883:SF33PALMITOYLTRANSFERASE ZDHHC12-RELATEDcoord: 1..267
NoneNo IPR availablePANTHERPTHR22883ZINC FINGER DHHC DOMAIN CONTAINING PROTEINcoord: 1..267
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 137..159
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 194..274
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 171..193
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 160..170
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..136
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..17
score: 0.668
NoneNo IPR availableTMHMMTMhelixcoord: 137..159
NoneNo IPR availableTMHMMTMhelixcoord: 171..193

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0019462 ID=g.arboreum_cottongen_reftransV1_0019462; Name=g.arboreum_cottongen_reftransV1_0019462; organism=Gossypium arboreum; type=contig; length=1368bp
CATTAAAATTTTGCGGGTAAAGAATCAGTTCATAGATATGGTAAATGATA
TATTGCCCTATAATGTCAGCAGCAACGGCATGTTAAAACATCTAAGCAAG
TGTAGGGCCTTGACTTTTCTTCAAGCTCTTGAGCTGAGGGCAGAGGTTCC
AAACTGTATATGTTGCTTCCACCACAACAGAAGTCGTATAAATTGTGGCA
AACTCCTTTACTAAAAGGATATACTCGCTCAGGAATCCCCCTTAGATATG
GGATTCGCCTGCGTCTAACGAGTTCATAAGTTGTCTGATTTGTCAGAATA
AGATAGCTATGAAAAAATAGGAGGAGGAGTAGAAACACAATAAAAATTGA
CAAGGGAATCAATAGTAAAATCGCGATAGCATCATTCCACCAGGCCCTTG
ATATGTTGGCCTTCAGGTATGTAATGTACAAGATGCCAGTCCAGAGGCAC
AGCGCACTCTCTTCACAAATGTACCACCAAAATTTACAGTGATTACCCTG
GCCAATGCATGTTCCGAGCCATACACAATGGTGATCAAAGTGAAGAACAC
ATTTATCACAATCATAACAATGCTTCGCACGTGGAGGCTGTTCAACATTA
CAATAGGAGCAAATGCAAGACCTAACGGATGTTCCAGGGGGATACATGTC
CATAACCAACTTTGTCCAAGACGAAGGATTACTCCCTTGGAAATTTCTAC
CCGATTGACTCCCCTCTATGACAACATTCAAGCTTCCATTTTGGCTTGAA
GCAGGCTGTTTTGAGGCCATTGACGACTTCTGATATATCACATTCGTCTC
ATTAACAGCCCTCATTACATCAACAACATAACCAGGAGAAGAACTAGAAG
TAATAAAGTATTGTACCAATGTAGCAAGAAGCAACAACAAATATAAAGCA
GTGTACCAGGGTTCTTTTTTTCGTTTTATCTATCAAATCACTATCGAAAA
GGAAAAGAATGCCAACGTATACCAGATGCAGCATCACTAATGTCACTTTC
AAAACCAACGATGATCTCCGTGCAGGATCGGAGAGGCAAGGGAAGCAGTG
ATAACATCGGTCGAGAGCTCGATCGCGAAAGGAACGGCATATACCAATGA
CCATGGTCACCAAACAAATCCTCCCAACAACAAAAAAATTTCAAATCAAA
TCAAAACATTAAATGACACCACTCGTTGCATCACAATGCTCCTCTTTTGG
TTCTGTTTTTCCTGGTAAAGTTCTTGTTTGTCTCTTTTGCTAGCAAGATA
ATTTTTTCTAGGGAAAGTGACAGTAGAATAGAAATAGGCAAAGCCAAAAC
TATTTACTAGAAACGTAAAGGGAAAATAATACAGCTTGGGGAAGATTGCA
GATAAACTAAAAAATAAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR001594Palmitoyltrfase_DHHC
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding