g.arboreum_cottongen_reftransV1_0019462, g.arboreum_cottongen_reftransV1_0019462 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0019462
Unique Name	g.arboreum_cottongen_reftransV1_0019462
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	1368

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr4	chromosome	g.arboreum_cottongen_reftransV1_0019462:1..1368 . Chr4:100058638..100062458 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A0D2NU86_GOSRA (S-acyltransferase OS=Gossypium raimondii GN=B456_003G004400 PE=3 SV=1)

HSP 1 Score: 406.371 bits (1043), Expect = 5.454e-136
Identity = 241/269 (89.59%), Postives = 253/269 (94.05%), Query Frame = -2

Query:  114 KKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEK 920
            KKEPWYTALYLLLL ATLVQYFITSSSSPGYV DVMRAVNETNVI QKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTS+RSC CSYCNVEQPPRAKHC+DCDKCVL FDHHC+WLG+C+GQ NHCKFWWYICEE+ALCLWTGILYI YLKANISRAWW DAI ILLLI LSI I+FLLLLL FHSYL+LTNQTTYELVRRRRIPYLR IPERVYPFSKG+C NLY+FCC  S+IYSLEPLPS+QELEEK
Sbjct:   64 KKEPWYTALYLLLLFATLVQYFITSSSSPGYVFDVMRAVNETNVICQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSIRSCTCSYCNVEQPPRAKHCHDCDKCVLQFDHHCLWLGSCVGQDNHCKFWWYICEETALCLWTGILYIMYLKANISRAWWKDAIMILLLIALSIVIIFLLLLLLFHSYLVLTNQTTYELVRRRRIPYLRRIPERVYPFSKGICRNLYNFCCVRSSIYSLEPLPSSQELEEK 332

HSP 2 Score: 107.457 bits (267), Expect = 5.454e-136
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = -1

Query:  913 VTMVIGICRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKR 1110
            +T V+GICRSF DRAL R +HCFPCLSDPARRSS  LKVTLVMLHL++VGILF+FD DLI+ TKK 
Sbjct:    1 MTTVMGICRSFHDRALARFFHCFPCLSDPARRSSWGLKVTLVMLHLIFVGILFVFDGDLIETTKKE 66

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BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: M5W2M3_PRUPE (S-acyltransferase OS=Prunus persica GN=PRUPE_ppa007948mg PE=3 SV=1)

HSP 1 Score: 406.371 bits (1043), Expect = 1.409e-135
Identity = 219/286 (76.57%), Postives = 253/286 (88.46%), Query Frame = -2

Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K K+EPWYTA+YL L +ATLVQYF+TS+SSPG+V+D MRAVNE+N I++K+ +ASKQPASS+NG++ V +EGSQ  R+  GSN +SWTKLVMD+YPPGTSVRS  CSYCNVEQPPR+KHC+DCDKCVL FDHHCVWLGTCIG GNHCKFWWYICEE++LCLWTGI+YITYLK NIS AWW DAI ILLL+ LSI I+FLLLLL FHSYL+LTNQTTYELVRRRRIPYLRG+PERVYPFSKG C NLY+FCC  S+ Y +E LP+AQELEEKSRPY+  DV+TCRCC
Sbjct:   64 KTKREPWYTAIYLTLFVATLVQYFVTSASSPGFVLDAMRAVNESNTIFRKALVASKQPASSKNGNVVVTVEGSQMARSLLGSNATSWTKLVMDLYPPGTSVRSLTCSYCNVEQPPRSKHCHDCDKCVLQFDHHCVWLGTCIGLGNHCKFWWYICEETSLCLWTGIMYITYLKENISSAWWKDAIVILLLVTLSISIIFLLLLLLFHSYLVLTNQTTYELVRRRRIPYLRGVPERVYPFSKGACRNLYEFCCLRSSKYRMERLPTAQELEEKSRPYSICDVVTCRCC 349

HSP 2 Score: 89.7373 bits (221), Expect = 1.994e-16
Identity = 45/88 (51.14%), Postives = 60/88 (68.18%), Query Frame = -1

Query:  847 VIGICRSFRD---RALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1101
            ++ +CRS      R LDRCY   PCLSDPARRS+L LKV LVMLHL+YVG+LFLFD  LI+KTK+      +  +  + ++ T++ YF
Sbjct:    3 IVNVCRSLPGSSCRPLDRCYRFLPCLSDPARRSALGLKVALVMLHLIYVGMLFLFDGGLIEKTKREPW---YTAIYLTLFVATLVQYF 87

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BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: B9SAK9_RICCO (S-acyltransferase OS=Ricinus communis GN=RCOM_0728630 PE=3 SV=1)

HSP 1 Score: 402.134 bits (1032), Expect = 5.142e-134
Identity = 215/286 (75.17%), Postives = 247/286 (86.36%), Query Frame = -2

Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K ++EPWY  LYLLL +ATLVQYF T+ SSPGYV+D MR +N+ N  + K+S+ SKQPASS+NGSL + ++ S+SG+   GSN +SWTK+V+DMYPPGTSVR+  CSYCNVEQPPRAKHC+DCDKCVL FDHHCVWLGTCIGQGNHC+FWWYICEE+ LCLWTGILYI YLKANI+RAWW DAI I+LL+ LSI  +FLLLLL FHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKG C NLY+FCC  S++Y+LE LP+  ELEEKSRPYTCLD LTCRCC
Sbjct:   61 KARQEPWYIVLYLLLFVATLVQYFATACSSPGYVLDAMRGLNDKNAAFAKASIPSKQPASSKNGSLIITVDESRSGKTSSGSNITSWTKIVLDMYPPGTSVRTLTCSYCNVEQPPRAKHCHDCDKCVLQFDHHCVWLGTCIGQGNHCRFWWYICEETTLCLWTGILYIAYLKANITRAWWKDAIMIILLVTLSIASIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKGACRNLYEFCCVRSSLYNLERLPTPIELEEKSRPYTCLDFLTCRCC 346

HSP 2 Score: 79.7221 bits (195), Expect = 4.256e-13
Identity = 40/74 (54.05%), Postives = 53/74 (71.62%), Query Frame = -1

Query:  847 ALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1068
            AL  CY  FPCL+DPARRS+L LKV LVMLHL+YVGILF+FD DLI+K ++      +I +    ++ T++ YF
Sbjct:   14 ALHGCYRLFPCLADPARRSALGLKVALVMLHLIYVGILFIFDDDLIEKARQEPW---YIVLYLLLFVATLVQYF 84

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A068TZX2_COFCA (S-acyltransferase OS=Coffea canephora GN=GSCOC_T00036995001 PE=3 SV=1)

HSP 1 Score: 400.208 bits (1027), Expect = 3.596e-133
Identity = 211/286 (73.78%), Postives = 247/286 (86.36%), Query Frame = -2

Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K K++PWYTA+YL LL+ATL QYF+TS++SPGYV++ MR VNET+ + ++ S+ASKQPASS NGSL V ++  Q GRN  GSN +SWTK+VMDMYPPGTSVR+  CSYCNV QPPRAKHC+DCDKCVL FDHHCVWLGTCIGQ NHC+FWWYICEE+ALCLWTGILYI+YLK+NI++AWW D I ILLL  L + ++FL+LLL FHSYLI+TNQTTYELVRRRRIPYLRGIPERVYPFS+GVC NLY+FC   S  Y +E LP+AQELEEK+RPYTCLD LTCRCC
Sbjct:   63 KTKQQPWYTAIYLSLLVATLAQYFLTSNTSPGYVLEAMRVVNETDALVRRKSVASKQPASSNNGSLVVTVDADQLGRNLLGSNATSWTKVVMDMYPPGTSVRTWTCSYCNVVQPPRAKHCHDCDKCVLQFDHHCVWLGTCIGQNNHCRFWWYICEETALCLWTGILYISYLKSNITKAWWVDVIMILLLATLFVSLIFLVLLLLFHSYLIMTNQTTYELVRRRRIPYLRGIPERVYPFSQGVCRNLYNFCLARSTYYKMERLPTAQELEEKARPYTCLDALTCRCC 348

HSP 2 Score: 81.2629 bits (199), Expect = 1.493e-13
Identity = 42/83 (50.60%), Postives = 54/83 (65.06%), Query Frame = -1

Query:  847 GICRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1095
            G  R   DR  DRC   FPCLSDPARRS+L LK+ LV+LHL+YV ILF+FD D I+KTK++     +  +  S  + T+  YF
Sbjct:    7 GSLRDTWDRFFDRCSRFFPCLSDPARRSALCLKLALVVLHLIYVSILFIFDKDFIEKTKQQPW---YTAIYLSLLVATLAQYF 86

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: U5GH79_POPTR (S-acyltransferase OS=Populus trichocarpa GN=POPTR_0005s10680g PE=3 SV=1)

HSP 1 Score: 399.053 bits (1024), Expect = 8.776e-133
Identity = 215/287 (74.91%), Postives = 246/287 (85.71%), Query Frame = -2

Query:   69 KRKKEPWXXX-XXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K K+EPW    LYLLL +ATL+QYF+ S SSPGYV+D MR V+E N +++K+SM SKQPASS+NGSL + +EGSQS RN   SN +SWTKLV+DMYPPGTSVR+  C++CNVEQPPRAKHC+DCD+CVL FDHHCVWLG CIG GNHC+FWWYI EE+ALC+WTGILYITYLKANISRAWW D I ILLL+ LS  ++FLLLLL FHSYLILTNQTTYEL+RRRRIPYLRGIPERVYPFS+GVC NLY FCC  S+IYSLE LP+A ELE+KSRPYTCL  LTCRCC
Sbjct:   56 KTKQEPWSYTGLYLLLFVATLIQYFVASYSSPGYVLDAMREVSEKNSLFRKASMLSKQPASSKNGSLVITVEGSQSERNIPESNVTSWTKLVLDMYPPGTSVRTLSCTFCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGACIGWGNHCRFWWYIFEETALCIWTGILYITYLKANISRAWWKDVIMILLLVTLSFAVIFLLLLLIFHSYLILTNQTTYELIRRRRIPYLRGIPERVYPFSEGVCRNLYKFCCARSSIYSLERLPTAMELEDKSRPYTCLGFLTCRCC 342

HSP 2 Score: 73.9442 bits (180), Expect = 3.551e-11
Identity = 36/70 (51.43%), Postives = 51/70 (72.86%), Query Frame = -1

Query:  847 CYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1056
            C+   PCL+DPA RSSL LK  LV+LH+VY GILFLFDSDLI+KTK+    +  ++++   ++ T++ YF
Sbjct:   13 CHRFVPCLADPATRSSLGLKAALVVLHIVYAGILFLFDSDLIEKTKQEPWSYTGLYLLL--FVATLIQYF 80

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A0D2QKV1_GOSRA (S-acyltransferase OS=Gossypium raimondii GN=B456_003G004400 PE=3 SV=1)

HSP 1 Score: 394.43 bits (1012), Expect = 1.858e-132
Identity = 220/249 (88.35%), Postives = 234/249 (93.98%), Query Frame = -2

Query:   69 MRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 815
            MRAVNETNVI QKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTS+RSC CSYCNVEQPPRAKHC+DCDKCVL FDHHC+WLG+C+GQ NHCKFWWYICEE+ALCLWTGILYI YLKANISRAWW DAI ILLLI LSI I+FLLLLL FHSYL+LTNQTTYELVRRRRIPYLR IPERVYPFSKG+C NLY+FCC  S+IYSLEPLPS+QELEEK+RPYTCLD+L CRCC
Sbjct:    1 MRAVNETNVICQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSIRSCTCSYCNVEQPPRAKHCHDCDKCVLQFDHHCLWLGSCVGQDNHCKFWWYICEETALCLWTGILYIMYLKANISRAWWKDAIMILLLIALSIVIIFLLLLLLFHSYLVLTNQTTYELVRRRRIPYLRRIPERVYPFSKGICRNLYNFCCVRSSIYSLEPLPSSQELEEKARPYTCLDILACRCC 249

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A067G7N3_CITSI (S-acyltransferase OS=Citrus sinensis GN=CISIN_1g018884mg PE=3 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 1.605e-131
Identity = 210/286 (73.43%), Postives = 244/286 (85.31%), Query Frame = -2

Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K K EPWY   YLLL +ATLVQYFITS SSPGYV+D MR  NE N ++QK S  SKQPASS+NG++ + +EGS+ GR+F GSN +SWTKLV+D+YPPGTS+RS  CSYCNVEQPPRAKHC+DCD+CVL FDHHCVWLGTC+G  NHC+FWW+ICEE+ALCLWTG+LY+ YLKANI+ AWW D I I+LLI L+I ++FLLLLL FHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFS GVC NLY  CC  +++Y+LE LP+AQE+EEK RPYTCLD LTCRCC
Sbjct:   63 KTKHEPWYITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMVITMEGSRPGRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLVNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIVLLIILAISLIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLYKLCCVKASVYNLERLPTAQEIEEKCRPYTCLDFLTCRCC 348

HSP 2 Score: 81.2629 bits (199), Expect = 1.441e-13
Identity = 43/89 (48.31%), Postives = 58/89 (65.17%), Query Frame = -1

Query:  847 MVIGICRSFRDR---ALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1104
            M+  + R  RD     LDRC+   PCL+DPARRSSL LK  LV LHLV+VG++FLFDS+LI+KTK       F  ++   ++ T++ YF
Sbjct:    1 MLSAVSRPIRDSCAPVLDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFDSELIEKTKHEPWYITFYLLL---FVATLVQYF 86

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A059AIM2_EUCGR (S-acyltransferase OS=Eucalyptus grandis GN=EUGRSUZ_J02517 PE=3 SV=1)

HSP 1 Score: 384.415 bits (986), Expect = 4.254e-127
Identity = 210/286 (73.43%), Postives = 240/286 (83.92%), Query Frame = -2

Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K +KEPWY ALYLLL +ATL+QYF+T+ SSPGYV+DVMRAVNE N ++  S    +Q ASS+NG   V  +G Q GRN  GSN +SW+K+VMD+YP G S R+  CSYCNVEQPPRAKHC+DCD+CVL FDHHCVWLGTCIGQGNHC+FWWYICEE+ALC+WT ILYITYL A+ISRAWW DA+ ILLLI LSI ++FL LLL FHSYL+LTNQTTYELVRRRRIPYLRGIPERVYPFSKG C NLY FCC   +IY LE LP+AQELEEKS+P+TCLD LTCRCC
Sbjct:   58 KARKEPWYIALYLLLFVATLIQYFVTACSSPGYVLDVMRAVNEANAMF-TSRFKQRQTASSKNGGFVVSSDGDQLGRNLLGSNSTSWSKMVMDLYPLGMSTRTLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCIGQGNHCRFWWYICEETALCIWTVILYITYLTADISRAWWKDAVMILLLIFLSISLIFLFLLLLFHSYLVLTNQTTYELVRRRRIPYLRGIPERVYPFSKGACRNLYHFCCARGSIYDLERLPTAQELEEKSKPFTCLDALTCRCC 342

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: V4SI84_9ROSI (S-acyltransferase OS=Citrus clementina GN=CICLE_v10025980mg PE=3 SV=1)

HSP 1 Score: 383.259 bits (983), Expect = 1.539e-126
Identity = 214/286 (74.83%), Postives = 248/286 (86.71%), Query Frame = -2

Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K K EPWY   YLLL +ATLVQYFITS SSPGYV+D MR  NE N ++QK S  SKQPASS+NG++ + +EGS+SGR+F GSN +SWTKLV+D+YPPGTS+RS  CSYCNVEQPPRAKHC+DCD+CVL FDHHCVWLGTC+G GNHC+FWW+ICEE+ALCLWTG+LY+ YLKANI+ AWW D I I+LLI L+IF++FLLLLL FHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFS GVC NLY  CC  +++Y+LE LP+AQE+EEKSRPYTCLD LTCRCC
Sbjct:   63 KTKHEPWYITFYLLLFVATLVQYFITSGSSPGYVLDAMRHANERNALFQKISTTSKQPASSKNGNMVITMEGSRSGRSFSGSNATSWTKLVLDLYPPGTSIRSLTCSYCNVEQPPRAKHCHDCDRCVLQFDHHCVWLGTCVGLGNHCRFWWFICEETALCLWTGVLYVAYLKANIALAWWKDVIMIMLLIILAIFLIFLLLLLLFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSDGVCRNLYKLCCVKASVYNLERLPTAQEIEEKSRPYTCLDFLTCRCC 348

HSP 2 Score: 77.7962 bits (190), Expect = 2.265e-12
Identity = 42/89 (47.19%), Postives = 57/89 (64.04%), Query Frame = -1

Query:  847 MVIGICRSFRDR---ALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1104
            M+  + R  RD     LDRC+   PCL+DPARRSSL LK  LV LHLV+VG++FLF S+LI+KTK       F  ++   ++ T++ YF
Sbjct:    1 MLSAVSRPIRDSCAPVLDRCFRLVPCLADPARRSSLGLKAALVTLHLVFVGVIFLFYSELIEKTKHEPWYITFYLLL---FVATLVQYF 86

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A059ARF7_EUCGR (S-acyltransferase OS=Eucalyptus grandis GN=EUGRSUZ_I02283 PE=3 SV=1)

HSP 1 Score: 377.096 bits (967), Expect = 3.815e-124
Identity = 205/284 (72.18%), Postives = 239/284 (84.15%), Query Frame = -2

Query:   69 KKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 920
            +++PWY ALYLLL +A L+QYF+T+ SSPGYV+D M+A NE N ++ +S  ASK PASS+NGSL V ++ +QSGRN  GS  SSW+K+VM+ YP GTS+R+  CSYCN+EQPPRAKHC+DCDKCVL FDHHCVWLGTCIGQGNHC+FWWYI EE+ALCLWTGILYITYLK +IS AWW D I ILLLI L +  +FLLLLL FHSYL+LTNQTTYELVRRRRIPYLRG+PE V+PFSKGVC NLY FCC  S IY +E LP+A E+EEK RPYTCLDVLTCRCC
Sbjct:   66 RRQPWYIALYLLLFVAALIQYFVTAGSSPGYVLDAMKAYNEANSLFIRSPTASKHPASSKNGSLTVTVDINQSGRNSLGS--SSWSKMVMEFYPLGTSIRTMTCSYCNIEQPPRAKHCHDCDKCVLQFDHHCVWLGTCIGQGNHCRFWWYIFEETALCLWTGILYITYLKTSISGAWWKDLIMILLLISLVVLFIFLLLLLLFHSYLVLTNQTTYELVRRRRIPYLRGLPENVFPFSKGVCRNLYRFCCAQSTIYDMERLPTAFEVEEKLRPYTCLDVLTCRCC 347

HSP 2 Score: 88.9669 bits (219), Expect = 3.598e-16
Identity = 46/78 (58.97%), Postives = 55/78 (70.51%), Query Frame = -1

Query:  880 GICR---SFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTL---VHCFIFVVA 1095
            G+C      RDRALDRC   FPCL+DPARRSSLVLKV LV LHLVY GILF FD DLI+ T+++     ++  +FV A
Sbjct:    5 GVCAPIAELRDRALDRCSRWFPCLADPARRSSLVLKVALVALHLVYAGILFSFDEDLIENTRRQPWYIALYLLLFVAA 82

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDH11_ARATH (Protein S-acyltransferase 10 OS=Arabidopsis thaliana GN=PAT10 PE=1 SV=1)

HSP 1 Score: 308.145 bits (788), Expect = 3.038e-99
Identity = 175/286 (61.19%), Postives = 224/286 (78.32%), Query Frame = -2

Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K K++PWY   Y+LL  ATL+QYF+TS SSPGYVVD MR V E + +Y+  S  S Q AS ++ S+ V +EG  +  +     P+ W KLV+D+YPPGTS+R+  C YC+VEQPPR KHC+DCD+CVL FDHHCVWLGTCIGQ NH KFWWYICEE+ LC+WT I+Y+ YL +N+++ WW +AI ILLL+ L+I ++F+LLLL FHSYLILTNQ+TYELVRRRRIPY+R IP RV+PFS+G+  NLY+ CCG    Y+L+ LP+A ELE++SRPYTC+D+L CRCC
Sbjct:   61 KTKRDPWYMGCYILLFSATLLQYFVTSGSSPGYVVDAMRDVCEASAMYRNPSTTSIQHASRKSESVVVNVEGGSA--SCPRRPPTPWGKLVLDLYPPGTSIRNLTCGYCHVEQPPRTKHCHDCDRCVLQFDHHCVWLGTCIGQKNHSKFWWYICEETTLCIWTLIMYVDYL-SNVAKPWWKNAIIILLLVILAISLIFVLLLLIFHSYLILTNQSTYELVRRRRIPYMRNIPGRVHPFSRGIRRNLYNVCCGN---YNLDSLPTAFELEDRSRPYTCIDMLKCRCC 340

HSP 2 Score: 60.077 bits (144), Expect = 1.517e-8
Identity = 43/88 (48.86%), Postives = 60/88 (68.18%), Query Frame = -1

Query:  847 IGICRSF---RDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTL-VHCFIFVVASCYIGTILYYF 1098
            +G+C  F    DRA D+C    PCLSDP RRSSL+LK+ LV LHLV++G LFLFD++ I+KTK+    + C+I + ++    T+L YF
Sbjct:    1 MGVCCPFLQPWDRARDQCLLNLPCLSDPVRRSSLLLKLALVALHLVFIGFLFLFDAEFIEKTKRDPWYMGCYILLFSA----TLLQYF 84

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC4_ARATH (Probable protein S-acyltransferase 2 OS=Arabidopsis thaliana GN=PAT02 PE=2 SV=3)

HSP 1 Score: 75.485 bits (184), Expect = 2.221e-13
Identity = 67/230 (29.13%), Postives = 109/230 (47.39%), Query Frame = -2

Query:  180 FITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGIL-YITYLKAN---ISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDF 857
            F+TSS  PG +                     +   + +   L+++ + S+   N  G+     TK   D+   G +V+   C  C + +PPRA HC  C+ CV  FDHHC W+G CI   N+  F  +I   + LCL+  +  +++ L+ +   +     ND + ++L++   + + F+  L  FH YLI TNQTTYE  R R         ++  P+ KG+  NLY+ 
Sbjct:  103 FLTSSRDPGII--------------------PRNKEAPEAEGLDMITQSSEWVNNKLGNTKIPRTK---DILVNGYTVKVKFCDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIALRNYPYFICFISTSTLLCLYVFVFSWVSMLEVHGKMLLMVITNDLVFVVLILYCFVVVWFVGGLTVFHLYLICTNQTTYENFRYR-------YDKKENPYGKGLFKNLYEL 302

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDH13_ARATH (Probable protein S-acyltransferase 4 OS=Arabidopsis thaliana GN=PAT04 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.659e-13
Identity = 59/175 (33.71%), Postives = 93/175 (53.14%), Query Frame = -2

Query:  183 GSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGI-----LYITYLKANIS--RAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYD 686
            G  P+     V D+   G +V+   C  C + +PPRA HC  C+ CV  FDHHC W+G CIG  N+  F+ +I   + LC++        ++  ++   IS  +A   D ++ +L++   I + F+  L  FHSYLI TNQTTYE  R R         ++  P++KG+  N+++
Sbjct:  123 GRTPNIRIPRVKDVTVNGHTVKVKFCDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIGVRNYRFFFMFISTSTTLCIYVFAFSWLNIFQRHMDEKISIWKAISKDVLSDILIVYCFITVWFVGGLTIFHSYLICTNQTTYENFRYR-------YDKKENPYNKGILGNIWE 290

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDH10_ARATH (Probable protein S-acyltransferase 5 OS=Arabidopsis thaliana GN=PAT05 PE=1 SV=2)

HSP 1 Score: 73.9442 bits (180), Expect = 7.451e-13
Identity = 61/175 (34.86%), Postives = 88/175 (50.29%), Query Frame = -2

Query:  174 PSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLK-------ANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCC 677
            P S      DM   G +V+   C  C + +PPRA HC  C+ CV  FDHHC WLG CIG  N+  ++ ++   + LC++  +    Y+K        NI +++     +I L+I   I + F+  L  FH YL+ TNQ+TYE  R R   Y R       PF+KG+  N  +  C
Sbjct:  138 PQSRLPRTKDMIVNGITVKIKYCDTCMLYRPPRASHCSICNNCVEKFDHHCPWLGQCIGLRNYRFYFMFVLCSTLLCIYVHVFCWIYVKRIMDSENINIWKSFLKTPASIALIIYTFICVWFVGGLTCFHLYLMSTNQSTYENFRYR---YDR----HENPFNKGIVGNFMEVFC 305

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDH21_ARATH (Probable protein S-acyltransferase 3 OS=Arabidopsis thaliana GN=PAT03 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.133e-12
Identity = 62/218 (28.44%), Postives = 107/218 (49.08%), Query Frame = -2

Query:  222 ITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGIL-YITYLK--ANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVR----RRRIPYLRGIPERV 854
            +TS+  PG +       N+T++I +  S +S                 +QS        P+       D++  G +++   C  C + +PPRA HC  C+ CV  FDHHC W+G CI + N+  F  +I   + LC++  +  +I  ++    + R   +D ++++L++   + + F+  L  FH YL+ TNQTTYE  R    ++  PY RG+ + V
Sbjct:  113 LTSARDPGII-----PRNKTSMILEDDSDSSL----------------TQSMEWVNNKTPNLKIPRTKDVFVNGYTIKVKFCDTCLLYRPPRASHCSICNNCVQRFDHHCPWVGQCIARRNYPFFICFISSSTLLCIYVFVFSWINLIRQPGKLWRTMSDDIVSVILIVYTFVAVWFVGGLTIFHFYLMSTNQTTYENFRYRYDKKENPYKRGLLKNV 309

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDH19_ARATH (Protein S-acyltransferase 8 OS=Arabidopsis thaliana GN=PAT08 PE=1 SV=2)

HSP 1 Score: 72.7886 bits (177), Expect = 1.408e-12
Identity = 60/161 (37.27%), Postives = 82/161 (50.93%), Query Frame = -2

Query:  231 PSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLK-------ANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVR-----RRRIPYLRGIP 677
            PS       ++   G SVR   C  C + +PPR  HC  C+ CV  FDHHC W+G CIG  N+  F+ ++   + LC++   +   Y+K       A + RA      A++L+I   I + F+  L  FH YLI TNQTTYE +R      R I Y RG P
Sbjct:  116 PSVQIPRTKEVIVNGVSVRVKYCDTCMLYRPPRCSHCSICNNCVERFDHHCPWVGQCIGLRNYRYFFMFVSSSTLLCIYIFSMSAVYIKILMDHQQATVWRAMKESPWAVVLMIYCFIALWFVGGLTAFHLYLISTNQTTYEKLRYRSSHSRSIVYNRGCP 276

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDH14_MOUSE (Probable palmitoyltransferase ZDHHC14 OS=Mus musculus GN=Zdhhc14 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.471e-12
Identity = 40/115 (34.78%), Postives = 59/115 (51.30%), Query Frame = -2

Query:  378 VIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDA 722
            +  G+ SG    G  P   TK V+     G +V+   C  C + +PPRA HC  CD CV  FDHHC W+G C+G+ N+  F+ +I   S L ++     IT++     +  + DA
Sbjct:  137 IANGTSSG----GYRPPPRTKEVVIN---GQTVKLKYCFTCKIFRPPRASHCSLCDNCVEQFDHHCPWVGNCVGKRNYRFFYMFILSLSFLTVFIFAFVITHVIHRSQQKGFLDA 244

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDH14_HUMAN (Probable palmitoyltransferase ZDHHC14 OS=Homo sapiens GN=ZDHHC14 PE=1 SV=1)

HSP 1 Score: 72.4034 bits (176), Expect = 2.770e-12
Identity = 38/103 (36.89%), Postives = 55/103 (53.40%), Query Frame = -2

Query:  414 VIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYL 722
            +  G+ SG    G  P   TK V+     G +V+   C  C + +PPRA HC  CD CV  FDHHC W+G C+G+ N+  F+ +I   S L ++     IT++
Sbjct:  137 IANGTSSG----GYRPPPRTKEVIIN---GQTVKLKYCFTCKIFRPPRASHCSLCDNCVERFDHHCPWVGNCVGKRNYRFFYMFILSLSFLTVFIFAFVITHV 232

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC7_DICDI (Putative ZDHHC-type palmitoyltransferase 7 OS=Dictyostelium discoideum GN=DDB_G0276017 PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 3.574e-12
Identity = 56/154 (36.36%), Postives = 88/154 (57.14%), Query Frame = -2

Query:  162 ICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYIT-YLKANISRAW-WNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPER-VYPFSKGVCHNLYDFCCGGSN 614
             C  C V+ P R KHC  C++CVL +DHHCV++G C+G  NH  F  ++  ES L L    + +T +++ N  + W +++   I   + +   +     L  FHS+LILTNQ+++E  + +RI YL+   +R + PF+KG  +NL  F  G  N
Sbjct:  250 FCKKCLVDIPLRTKHCVKCNRCVLKYDHHCVFIGGCVGLNNHKNFLLFLLAESLLLLLGLRIIVTGFVRENSIKEWIFSNIAIIPPTLLIFGGLCMPFALFCFHSFLILTNQSSWEFNKYQRITYLKPFSKRGINPFNKGPWNNLKKFLKGDEN 403

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC9_MOUSE (Palmitoyltransferase ZDHHC9 OS=Mus musculus GN=Zdhhc9 PE=2 SV=1)

HSP 1 Score: 69.707 bits (169), Expect = 1.333e-11
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = -2

Query:  414 CSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYL 611
            C  C + +PPRA HC  CD CV  FDHHC W+G C+G+ N+  F+ +I   S L ++     I Y+
Sbjct:  141 CYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYV 206

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2NU86_GOSRA	5.454e-136	89.59	S-acyltransferase OS=Gossypium raimondii GN=B456_0...	[more]
M5W2M3_PRUPE	1.409e-135	76.57	S-acyltransferase OS=Prunus persica GN=PRUPE_ppa00...	[more]
B9SAK9_RICCO	5.142e-134	75.17	S-acyltransferase OS=Ricinus communis GN=RCOM_0728...	[more]
A0A068TZX2_COFCA	3.596e-133	73.78	S-acyltransferase OS=Coffea canephora GN=GSCOC_T00...	[more]
U5GH79_POPTR	8.776e-133	74.91	S-acyltransferase OS=Populus trichocarpa GN=POPTR_...	[more]
A0A0D2QKV1_GOSRA	1.858e-132	88.35	S-acyltransferase OS=Gossypium raimondii GN=B456_0...	[more]
A0A067G7N3_CITSI	1.605e-131	73.43	S-acyltransferase OS=Citrus sinensis GN=CISIN_1g01...	[more]
A0A059AIM2_EUCGR	4.254e-127	73.43	S-acyltransferase OS=Eucalyptus grandis GN=EUGRSUZ...	[more]
V4SI84_9ROSI	1.539e-126	74.83	S-acyltransferase OS=Citrus clementina GN=CICLE_v1...	[more]
A0A059ARF7_EUCGR	3.815e-124	72.18	S-acyltransferase OS=Eucalyptus grandis GN=EUGRSUZ...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
ZDH11_ARATH	3.038e-99	61.19	Protein S-acyltransferase 10 OS=Arabidopsis thalia...	[more]
ZDHC4_ARATH	2.221e-13	29.13	Probable protein S-acyltransferase 2 OS=Arabidopsi...	[more]
ZDH13_ARATH	6.659e-13	33.71	Probable protein S-acyltransferase 4 OS=Arabidopsi...	[more]
ZDH10_ARATH	7.451e-13	34.86	Probable protein S-acyltransferase 5 OS=Arabidopsi...	[more]
ZDH21_ARATH	1.133e-12	28.44	Probable protein S-acyltransferase 3 OS=Arabidopsi...	[more]
ZDH19_ARATH	1.408e-12	37.27	Protein S-acyltransferase 8 OS=Arabidopsis thalian...	[more]
ZDH14_MOUSE	1.471e-12	34.78	Probable palmitoyltransferase ZDHHC14 OS=Mus muscu...	[more]
ZDH14_HUMAN	2.770e-12	36.89	Probable palmitoyltransferase ZDHHC14 OS=Homo sapi...	[more]
ZDHC7_DICDI	3.574e-12	36.36	Putative ZDHHC-type palmitoyltransferase 7 OS=Dict...	[more]
ZDHC9_MOUSE	1.333e-11	42.42	Palmitoyltransferase ZDHHC9 OS=Mus musculus GN=Zdh...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001594	Zinc finger, DHHC-type, palmitoyltransferase	PFAM	PF01529	zf-DHHC	coord: 91..209 e-value: 1.2E-30 score: 106.3
IPR001594	Zinc finger, DHHC-type, palmitoyltransferase	PROSITE	PS50216	ZF_DHHC	coord: 92..142 score: 22.267
None	No IPR available	PANTHER	PTHR22883:SF33	PALMITOYLTRANSFERASE ZDHHC12-RELATED	coord: 1..267
None	No IPR available	PANTHER	PTHR22883	ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN	coord: 1..267
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 137..159
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 194..274
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 171..193
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 160..170
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..13
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 18..136
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..17 score: 0.668
None	No IPR available	TMHMM	TMhelix		coord: 137..159
None	No IPR available	TMHMM	TMhelix		coord: 171..193

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0019462 ID=g.arboreum_cottongen_reftransV1_0019462; Name=g.arboreum_cottongen_reftransV1_0019462; organism=Gossypium arboreum; type=contig; length=1368bp
CATTAAAATTTTGCGGGTAAAGAATCAGTTCATAGATATGGTAAATGATA
TATTGCCCTATAATGTCAGCAGCAACGGCATGTTAAAACATCTAAGCAAG
TGTAGGGCCTTGACTTTTCTTCAAGCTCTTGAGCTGAGGGCAGAGGTTCC
AAACTGTATATGTTGCTTCCACCACAACAGAAGTCGTATAAATTGTGGCA
AACTCCTTTACTAAAAGGATATACTCGCTCAGGAATCCCCCTTAGATATG
GGATTCGCCTGCGTCTAACGAGTTCATAAGTTGTCTGATTTGTCAGAATA
AGATAGCTATGAAAAAATAGGAGGAGGAGTAGAAACACAATAAAAATTGA
CAAGGGAATCAATAGTAAAATCGCGATAGCATCATTCCACCAGGCCCTTG
ATATGTTGGCCTTCAGGTATGTAATGTACAAGATGCCAGTCCAGAGGCAC
AGCGCACTCTCTTCACAAATGTACCACCAAAATTTACAGTGATTACCCTG
GCCAATGCATGTTCCGAGCCATACACAATGGTGATCAAAGTGAAGAACAC
ATTTATCACAATCATAACAATGCTTCGCACGTGGAGGCTGTTCAACATTA
CAATAGGAGCAAATGCAAGACCTAACGGATGTTCCAGGGGGATACATGTC
CATAACCAACTTTGTCCAAGACGAAGGATTACTCCCTTGGAAATTTCTAC
CCGATTGACTCCCCTCTATGACAACATTCAAGCTTCCATTTTGGCTTGAA
GCAGGCTGTTTTGAGGCCATTGACGACTTCTGATATATCACATTCGTCTC
ATTAACAGCCCTCATTACATCAACAACATAACCAGGAGAAGAACTAGAAG
TAATAAAGTATTGTACCAATGTAGCAAGAAGCAACAACAAATATAAAGCA
GTGTACCAGGGTTCTTTTTTTCGTTTTATCTATCAAATCACTATCGAAAA
GGAAAAGAATGCCAACGTATACCAGATGCAGCATCACTAATGTCACTTTC
AAAACCAACGATGATCTCCGTGCAGGATCGGAGAGGCAAGGGAAGCAGTG
ATAACATCGGTCGAGAGCTCGATCGCGAAAGGAACGGCATATACCAATGA
CCATGGTCACCAAACAAATCCTCCCAACAACAAAAAAATTTCAAATCAAA
TCAAAACATTAAATGACACCACTCGTTGCATCACAATGCTCCTCTTTTGG
TTCTGTTTTTCCTGGTAAAGTTCTTGTTTGTCTCTTTTGCTAGCAAGATA
ATTTTTTCTAGGGAAAGTGACAGTAGAATAGAAATAGGCAAAGCCAAAAC
TATTTACTAGAAACGTAAAGGGAAAATAATACAGCTTGGGGAAGATTGCA
GATAAACTAAAAAATAAG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR001594	Palmitoyltrfase_DHHC

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Search form

g.arboreum_cottongen_reftransV1_0019462, g.arboreum_cottongen_reftransV1_0019462 (contig) Gossypium arboreum

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