g.arboreum_cottongen_reftransV1_0019462, g.arboreum_cottongen_reftransV1_0019462 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0019462
Unique Name	g.arboreum_cottongen_reftransV1_0019462
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	1368

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr4	chromosome	g.arboreum_cottongen_reftransV1_0019462:1..1368 . Chr4:100058638..100062458 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A0B0NYP7_GOSAR (S-acyltransferase OS=Gossypium arboreum GN=F383_20929 PE=3 SV=1)

HSP 1 Score: 456.062 bits (1172), Expect = 1.650e-157
Identity = 264/287 (91.99%), Postives = 271/287 (94.43%), Query Frame = -2

Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMAS-KQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K KKEPWYTALYLLL  A LVQYFITS SSPGYV+D MR VNETNVI +KSSMA  +Q ASS+NGSL V  EG QSGRNFQG++ +SWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAIAILLLIPLSIFIVFLLLLLFFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC
Sbjct:   60 KTKKEPWYTALYLLLFFAALVQYFITSGSSPGYVLDAMRVVNETNVICKKSSMAKQRQTASSKNGSLPV--EGCQSGRNFQGTDSTSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAIAILLLIPLSIFIVFLLLLLFFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 344

HSP 2 Score: 129.798 bits (325), Expect = 1.650e-157
Identity = 63/64 (98.44%), Postives = 63/64 (98.44%), Query Frame = -1

Query:  913 MVIGICRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKR 1104
            MVIGICRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKK 
Sbjct:    1 MVIGICRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKE 64

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A0D2QVL9_GOSRA (S-acyltransferase OS=Gossypium raimondii GN=B456_007G189900 PE=3 SV=1)

HSP 1 Score: 456.062 bits (1172), Expect = 3.416e-155
Identity = 263/287 (91.64%), Postives = 271/287 (94.43%), Query Frame = -2

Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMAS-KQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K KKEPWYTALYLLL  ATLVQYFITS SSPGYV+D MRAVNETNVI +KSSMA  +Q ASS+NGSL V  EG QSGRNFQG+N +SWTKLVMDMYPPGTS+RSCIC YCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYL+ANISRAWWNDAIAILLLIPLSIFIVFLLLLLFFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCC GSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC
Sbjct:   60 KTKKEPWYTALYLLLFFATLVQYFITSGSSPGYVLDAMRAVNETNVICKKSSMAKQRQTASSKNGSLPV--EGCQSGRNFQGTNSTSWTKLVMDMYPPGTSIRSCICPYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLRANISRAWWNDAIAILLLIPLSIFIVFLLLLLFFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCDGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 344

HSP 2 Score: 128.642 bits (322), Expect = 7.330e-30
Identity = 65/86 (75.58%), Postives = 71/86 (82.56%), Query Frame = -1

Query:  847 MVIGICRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1104
            MVIG+CRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKK         ++   +  T++ YF
Sbjct:    1 MVIGMCRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKEPWYTALYLLL---FFATLVQYF 83

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A0D2PBR6_GOSRA (S-acyltransferase OS=Gossypium raimondii GN=B456_007G189900 PE=3 SV=1)

HSP 1 Score: 452.981 bits (1164), Expect = 5.094e-154
Identity = 262/286 (91.61%), Postives = 270/286 (94.41%), Query Frame = -2

Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K KKEPWYTALYLLL  ATLVQYFITS SSPGYV+D MRAVNETNVI +KSSMA  + ASS+NGSL V  EG QSGRNFQG+N +SWTKLVMDMYPPGTS+RSCIC YCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYL+ANISRAWWNDAIAILLLIPLSIFIVFLLLLLFFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCC GSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC
Sbjct:   60 KTKKEPWYTALYLLLFFATLVQYFITSGSSPGYVLDAMRAVNETNVICKKSSMA--KTASSKNGSLPV--EGCQSGRNFQGTNSTSWTKLVMDMYPPGTSIRSCICPYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLRANISRAWWNDAIAILLLIPLSIFIVFLLLLLFFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCDGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 341

HSP 2 Score: 128.642 bits (322), Expect = 6.811e-30
Identity = 65/86 (75.58%), Postives = 71/86 (82.56%), Query Frame = -1

Query:  847 MVIGICRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1104
            MVIG+CRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKK         ++   +  T++ YF
Sbjct:    1 MVIGMCRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKEPWYTALYLLL---FFATLVQYF 83

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A061DF44_THECC (S-acyltransferase OS=Theobroma cacao GN=TCM_000108 PE=3 SV=1)

HSP 1 Score: 442.965 bits (1138), Expect = 5.062e-150
Identity = 247/286 (86.36%), Postives = 261/286 (91.26%), Query Frame = -2

Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K K+EPWYTALYLLL  ATLVQYFITS SSPGYVVD MRAVNETNVIY+KSS+ASKQPASS+NGSL V +EGSQS R+FQG+N +SWTKLVMDMYP GT +R+C CSYCNVEQPPRAKHC+DCDKCVL FDHHCVWLGTCIGQGNHCKFWWYICEE+ALCLWTGILYITYLKANISRAWW  AI ILLLI LSI I+FLLLLL FHSYL+LTNQTTYELVRRRRIPYLRGIPERVYPFSKGVC NLYDFCC  S  YSLE LPSAQELEEKSRPYTCLDVLTCRCC
Sbjct:   62 KAKREPWYTALYLLLFFATLVQYFITSGSSPGYVVDAMRAVNETNVIYKKSSIASKQPASSKNGSLIVTVEGSQSARSFQGNNVASWTKLVMDMYPLGTPIRTCTCSYCNVEQPPRAKHCHDCDKCVLQFDHHCVWLGTCIGQGNHCKFWWYICEETALCLWTGILYITYLKANISRAWWKAAIMILLLIALSISIIFLLLLLLFHSYLVLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCSNLYDFCCVRSCSYSLESLPSAQELEEKSRPYTCLDVLTCRCC 347

HSP 2 Score: 114.775 bits (286), Expect = 4.086e-25
Identity = 54/88 (61.36%), Postives = 67/88 (76.14%), Query Frame = -1

Query:  847 VTMVIGICRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVVASCYIGTILYYF 1110
            +TMV+G+CR+FRDR+LDRC+ CFPCLSDPARRSSL LKV LVMLHL+Y GILFLFDSDLI K K+         ++   +  T++ YF
Sbjct:    1 MTMVVGMCRTFRDRSLDRCFQCFPCLSDPARRSSLGLKVALVMLHLIYAGILFLFDSDLIQKAKREPWYTALYLLL---FFATLVQYF 85

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A0D2NU90_GOSRA (S-acyltransferase OS=Gossypium raimondii GN=B456_003G004400 PE=3 SV=1)

HSP 1 Score: 433.335 bits (1113), Expect = 8.729e-147
Identity = 253/284 (89.08%), Postives = 267/284 (94.01%), Query Frame = -2

Query:   69 KKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 920
            KKEPWYTALYLLLL ATLVQYFITSSSSPGYV DVMRAVNETNVI QKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTS+RSC CSYCNVEQPPRAKHC+DCDKCVL FDHHC+WLG+C+GQ NHCKFWWYICEE+ALCLWTGILYI YLKANISRAWW DAI ILLLI LSI I+FLLLLL FHSYL+LTNQTTYELVRRRRIPYLR IPERVYPFSKG+C NLY+FCC  S+IYSLEPLPS+QELEEK+RPYTCLD+L CRCC
Sbjct:   22 KKEPWYTALYLLLLFATLVQYFITSSSSPGYVFDVMRAVNETNVICQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSIRSCTCSYCNVEQPPRAKHCHDCDKCVLQFDHHCLWLGSCVGQDNHCKFWWYICEETALCLWTGILYIMYLKANISRAWWKDAIMILLLIALSIVIIFLLLLLLFHSYLVLTNQTTYELVRRRRIPYLRRIPERVYPFSKGICRNLYNFCCVRSSIYSLEPLPSSQELEEKARPYTCLDILACRCC 305

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A0D2RE81_GOSRA (S-acyltransferase OS=Gossypium raimondii GN=B456_003G004400 PE=3 SV=1)

HSP 1 Score: 433.335 bits (1113), Expect = 3.200e-146
Identity = 253/284 (89.08%), Postives = 267/284 (94.01%), Query Frame = -2

Query:   69 KKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 920
            KKEPWYTALYLLLL ATLVQYFITSSSSPGYV DVMRAVNETNVI QKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTS+RSC CSYCNVEQPPRAKHC+DCDKCVL FDHHC+WLG+C+GQ NHCKFWWYICEE+ALCLWTGILYI YLKANISRAWW DAI ILLLI LSI I+FLLLLL FHSYL+LTNQTTYELVRRRRIPYLR IPERVYPFSKG+C NLY+FCC  S+IYSLEPLPS+QELEEK+RPYTCLD+L CRCC
Sbjct:   64 KKEPWYTALYLLLLFATLVQYFITSSSSPGYVFDVMRAVNETNVICQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSIRSCTCSYCNVEQPPRAKHCHDCDKCVLQFDHHCLWLGSCVGQDNHCKFWWYICEETALCLWTGILYIMYLKANISRAWWKDAIMILLLIALSIVIIFLLLLLLFHSYLVLTNQTTYELVRRRRIPYLRRIPERVYPFSKGICRNLYNFCCVRSSIYSLEPLPSSQELEEKARPYTCLDILACRCC 347

HSP 2 Score: 107.071 bits (266), Expect = 1.973e-22
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = -1

Query:  913 VTMVIGICRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKR 1110
            +T V+GICRSF DRAL R +HCFPCLSDPARRSS  LKVTLVMLHL++VGILF+FD DLI+ TKK 
Sbjct:    1 MTTVMGICRSFHDRALARFFHCFPCLSDPARRSSWGLKVTLVMLHLIFVGILFVFDGDLIETTKKE 66

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: D7U6V5_VITVI (S-acyltransferase OS=Vitis vinifera GN=VIT_00s0302g00050 PE=3 SV=1)

HSP 1 Score: 422.55 bits (1085), Expect = 2.437e-140
Identity = 227/286 (79.37%), Postives = 254/286 (88.81%), Query Frame = -2

Query:   69 KRKKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 926
            K KKEPWYTA+YLLL +ATL QYF TS SSPGYV+D MRA NET+ I++K+S  SKQPASS+NGS  + ++GSQSG+N  GSN +SWTKLVMDMYPPG+SVRS  C+YCNV QPPRAKHC+DCDKCVL FDHHCVWLGTCIGQGNHC+FWWYICEE+ALCLWTGILYI+YLKANISRAWW DAI I+LL+ LSI ++FLLLLL FHSYL+ TNQTTYELVRRRRIPYLRGIPERVYPFSKGVC NLY+FC   S+IY +EPLPSAQELE KSRPYTCLDVLTCRCC
Sbjct:  169 KTKKEPWYTAIYLLLFVATLAQYFFTSGSSPGYVLDAMRAANETDAIFRKTSTTSKQPASSKNGSYVITVDGSQSGKNPLGSNATSWTKLVMDMYPPGSSVRSWTCTYCNVLQPPRAKHCHDCDKCVLQFDHHCVWLGTCIGQGNHCRFWWYICEETALCLWTGILYISYLKANISRAWWMDAIMIVLLVTLSISLIFLLLLLLFHSYLVATNQTTYELVRRRRIPYLRGIPERVYPFSKGVCTNLYEFCFARSSIYRMEPLPSAQELEIKSRPYTCLDVLTCRCC 454

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A0D2THQ8_GOSRA (S-acyltransferase OS=Gossypium raimondii GN=B456_007G189900 PE=3 SV=1)

HSP 1 Score: 414.075 bits (1063), Expect = 3.811e-140
Identity = 232/250 (92.80%), Postives = 239/250 (95.60%), Query Frame = -2

Query:   69 MRAVNETNVIYQKSSMAS-KQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 815
            MRAVNETNVI +KSSMA  +Q ASS+NGSL V  EG QSGRNFQG+N +SWTKLVMDMYPPGTS+RSCIC YCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYL+ANISRAWWNDAIAILLLIPLSIFIVFLLLLLFFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCC GSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC
Sbjct:    1 MRAVNETNVICKKSSMAKQRQTASSKNGSLPV--EGCQSGRNFQGTNSTSWTKLVMDMYPPGTSIRSCICPYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLRANISRAWWNDAIAILLLIPLSIFIVFLLLLLFFHSYLILTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCDGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 248

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A0D2QDK5_GOSRA (S-acyltransferase OS=Gossypium raimondii GN=B456_003G004400 PE=3 SV=1)

HSP 1 Score: 409.068 bits (1050), Expect = 8.529e-137
Identity = 242/271 (89.30%), Postives = 255/271 (94.10%), Query Frame = -2

Query:  108 KKEPWXXXXXXXXXXXXLVQYFITSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSR 920
            KKEPWYTALYLLLL ATLVQYFITSSSSPGYV DVMRAVNETNVI QKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTS+RSC CSYCNVEQPPRAKHC+DCDKCVL FDHHC+WLG+C+GQ NHCKFWWYICEE+ALCLWTGILYI YLKANISRAWW DAI ILLLI LSI I+FLLLLL FHSYL+LTNQTTYELVRRRRIPYLR IPERVYPFSKG+C NLY+FCC  S+IYSLEPLPS+QELEEK+R
Sbjct:   64 KKEPWYTALYLLLLFATLVQYFITSSSSPGYVFDVMRAVNETNVICQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSIRSCTCSYCNVEQPPRAKHCHDCDKCVLQFDHHCLWLGSCVGQDNHCKFWWYICEETALCLWTGILYIMYLKANISRAWWKDAIMILLLIALSIVIIFLLLLLLFHSYLVLTNQTTYELVRRRRIPYLRRIPERVYPFSKGICRNLYNFCCVRSSIYSLEPLPSSQELEEKNR 334

HSP 2 Score: 107.457 bits (267), Expect = 8.529e-137
Identity = 50/66 (75.76%), Postives = 57/66 (86.36%), Query Frame = -1

Query:  913 VTMVIGICRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKR 1110
            +T V+GICRSF DRAL R +HCFPCLSDPARRSS  LKVTLVMLHL++VGILF+FD DLI+ TKK 
Sbjct:    1 MTTVMGICRSFHDRALARFFHCFPCLSDPARRSSWGLKVTLVMLHLIFVGILFVFDGDLIETTKKE 66

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Match: A0A0D2MHD9_GOSRA (S-acyltransferase OS=Gossypium raimondii GN=B456_003G004400 PE=3 SV=1)

HSP 1 Score: 407.912 bits (1047), Expect = 1.517e-136
Identity = 226/261 (86.59%), Postives = 241/261 (92.34%), Query Frame = -2

Query:   69 TSSSSPGYVVDVMRAVNETNVIYQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYLKANISRAWWNDAXXXXXXXXXXXXXXXXXXXXXXXXXXXLTNQTTYELVRRRRIPYLRGIPERVYPFSKGVCHNLYDFCCGGSNIYSLEPLPSAQELEEKSRPYTCLDVLTCRCC 851
            T+   P YV DVMRAVNETNVI QKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTS+RSC CSYCNVEQPPRAKHC+DCDKCVL FDHHC+WLG+C+GQ NHCKFWWYICEE+ALCLWTGILYI YLKANISRAWW DAI ILLLI LSI I+FLLLLL FHSYL+LTNQTTYELVRRRRIPYLR IPERVYPFSKG+C NLY+FCC  S+IYSLEPLPS+QELEEK+RPYTCLD+L CRCC
Sbjct:   62 TTKKEPCYVFDVMRAVNETNVICQKSSMASKQPASSQNGSLNVVIEGSQSGRNFQGSNPSSWTKLVMDMYPPGTSIRSCTCSYCNVEQPPRAKHCHDCDKCVLQFDHHCLWLGSCVGQDNHCKFWWYICEETALCLWTGILYIMYLKANISRAWWKDAIMILLLIALSIVIIFLLLLLLFHSYLVLTNQTTYELVRRRRIPYLRRIPERVYPFSKGICRNLYNFCCVRSSIYSLEPLPSSQELEEKARPYTCLDILACRCC 322

HSP 2 Score: 107.842 bits (268), Expect = 7.375e-23
Identity = 53/76 (69.74%), Postives = 62/76 (81.58%), Query Frame = -1

Query:  883 VTMVIGICRSFRDRALDRCYHCFPCLSDPARRSSLVLKVTLVMLHLVYVGILFLFDSDLIDKTKKRTLVHCFIFVV 1110
            +T V+GICRSF DRAL R +HCFPCLSDPARRSS  LKVTLVMLHL++VGILF+FD DLI+ TKK     C++F V
Sbjct:    1 MTTVMGICRSFHDRALARFFHCFPCLSDPARRSSWGLKVTLVMLHLIFVGILFVFDGDLIETTKKEP---CYVFDV 73

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC9_PONAB (Palmitoyltransferase ZDHHC9 OS=Pongo abelii GN=ZDHHC9 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.432e-11
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = -2

Query:  414 CSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYL 611
            C  C + +PPRA HC  CD CV  FDHHC W+G C+G+ N+  F+ +I   S L ++     I Y+
Sbjct:  141 CYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYV 206

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC9_HUMAN (Palmitoyltransferase ZDHHC9 OS=Homo sapiens GN=ZDHHC9 PE=1 SV=2)

HSP 1 Score: 69.3218 bits (168), Expect = 1.485e-11
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = -2

Query:  414 CSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYL 611
            C  C + +PPRA HC  CD CV  FDHHC W+G C+G+ N+  F+ +I   S L ++     I Y+
Sbjct:  141 CYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYV 206

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC9_BOVIN (Palmitoyltransferase ZDHHC9 OS=Bos taurus GN=ZDHHC9 PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 1.572e-11
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = -2

Query:  414 CSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWTGILYITYL 611
            C  C + +PPRA HC  CD CV  FDHHC W+G C+G+ N+  F+ +I   S L ++     I Y+
Sbjct:  141 CYTCKIFRPPRASHCSICDNCVERFDHHCPWVGNCVGKRNYRYFYLFILSLSLLTIYVFAFNIVYV 206

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: PFA3_GIBZE (Palmitoyltransferase PFA3 OS=Gibberella zeae (strain PH-1 / ATCC MYA-4620 / FGSC 9075 / NRRL 31084) GN=PFA3 PE=3 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.412e-11
Identity = 27/59 (45.76%), Postives = 32/59 (54.24%), Query Frame = -2

Query:  438 ICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWT 614
             C  C   +P RA HC  C +CVL  DHHC WL TCIG  NH  F  ++   S  C W+
Sbjct:  111 FCKKCQARKPDRAHHCSTCRRCVLKMDHHCPWLATCIGLRNHKAFLLFLIYTSLFCFWS 169

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC5_PONAB (Palmitoyltransferase ZDHHC5 OS=Pongo abelii GN=ZDHHC5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 7.558e-11
Identity = 32/88 (36.36%), Postives = 45/88 (51.14%), Query Frame = -2

Query:  381 GTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWT---GILYITYLKANISRAWWND 635
            G  VR   C+ C   +PPR  HC  CD CV  FDHHC W+  CIG+ N+  F+ ++   +A  +     G+LY+ Y    +S     D
Sbjct:   98 GIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYVLYHIEELSGVRTAD 185

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ERFB_ASHGO (Palmitoyltransferase ERF2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ERF2 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 7.649e-11
Identity = 29/62 (46.77%), Postives = 36/62 (58.06%), Query Frame = -2

Query:  441 VRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLW 626
            VR   C+ C + +PPRA HC  CD C+L FDHHC WL  CIGQ NH  F  ++       +W
Sbjct:  182 VRLKYCTTCRIWRPPRASHCAVCDSCILSFDHHCDWLNNCIGQRNHRYFLAFLFSSVLSSIW 243

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC5_CANFA (Palmitoyltransferase ZDHHC5 OS=Canis familiaris GN=ZDHHC5 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 8.248e-11
Identity = 31/82 (37.80%), Postives = 44/82 (53.66%), Query Frame = -2

Query:  399 GTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWT---GILYITYLKANIS 635
            G  VR   C+ C   +PPR  HC  CD CV  FDHHC W+  CIG+ N+  F+ ++   +A  +     G+LY+ Y    +S
Sbjct:   98 GIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYVLYHMEELS 179

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDH17_MOUSE (Palmitoyltransferase ZDHHC17 OS=Mus musculus GN=Zdhhc17 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.976e-11
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = -2

Query:  468 KLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYI 662
            K ++++   G+   S  CS C + +P R+KHC  C++C+  FDHHC W+G C+G GNH  F  Y+
Sbjct:  422 KTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYL 486

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDH17_HUMAN (Palmitoyltransferase ZDHHC17 OS=Homo sapiens GN=ZDHHC17 PE=1 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 8.976e-11
Identity = 27/65 (41.54%), Postives = 41/65 (63.08%), Query Frame = -2

Query:  468 KLVMDMYPPGTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYI 662
            K ++++   G+   S  CS C + +P R+KHC  C++C+  FDHHC W+G C+G GNH  F  Y+
Sbjct:  422 KTIVELAETGSLDLSIFCSTCLIRKPVRSKHCGVCNRCIAKFDHHCPWVGNCVGAGNHRYFMGYL 486

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Match: ZDHC5_PANTR (Palmitoyltransferase ZDHHC5 OS=Pan troglodytes GN=ZDHHC5 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 9.403e-11
Identity = 30/76 (39.47%), Postives = 42/76 (55.26%), Query Frame = -2

Query:  417 GTSVRSCICSYCNVEQPPRAKHCYDCDKCVLHFDHHCVWLGTCIGQGNHCKFWWYICEESALCLWT---GILYITY 635
            G  VR   C+ C   +PPR  HC  CD CV  FDHHC W+  CIG+ N+  F+ ++   +A  +     G+LY+ Y
Sbjct:   98 GIQVRMKWCATCRFYRPPRCSHCSVCDNCVEEFDHHCPWVNNCIGRRNYRYFFLFLLSLTAHIMGVFGFGLLYVLY 173

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0B0NYP7_GOSAR	1.650e-157	91.99	S-acyltransferase OS=Gossypium arboreum GN=F383_20...	[more]
A0A0D2QVL9_GOSRA	3.416e-155	91.64	S-acyltransferase OS=Gossypium raimondii GN=B456_0...	[more]
A0A0D2PBR6_GOSRA	5.094e-154	91.61	S-acyltransferase OS=Gossypium raimondii GN=B456_0...	[more]
A0A061DF44_THECC	5.062e-150	86.36	S-acyltransferase OS=Theobroma cacao GN=TCM_000108...	[more]
A0A0D2NU90_GOSRA	8.729e-147	89.08	S-acyltransferase OS=Gossypium raimondii GN=B456_0...	[more]
A0A0D2RE81_GOSRA	3.200e-146	89.08	S-acyltransferase OS=Gossypium raimondii GN=B456_0...	[more]
D7U6V5_VITVI	2.437e-140	79.37	S-acyltransferase OS=Vitis vinifera GN=VIT_00s0302...	[more]
A0A0D2THQ8_GOSRA	3.811e-140	92.80	S-acyltransferase OS=Gossypium raimondii GN=B456_0...	[more]
A0A0D2QDK5_GOSRA	8.529e-137	89.30	S-acyltransferase OS=Gossypium raimondii GN=B456_0...	[more]
A0A0D2MHD9_GOSRA	1.517e-136	86.59	S-acyltransferase OS=Gossypium raimondii GN=B456_0...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0019462 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
ZDHC9_PONAB	1.432e-11	42.42	Palmitoyltransferase ZDHHC9 OS=Pongo abelii GN=ZDH...	[more]
ZDHC9_HUMAN	1.485e-11	42.42	Palmitoyltransferase ZDHHC9 OS=Homo sapiens GN=ZDH...	[more]
ZDHC9_BOVIN	1.572e-11	42.42	Palmitoyltransferase ZDHHC9 OS=Bos taurus GN=ZDHHC...	[more]
PFA3_GIBZE	5.412e-11	45.76	Palmitoyltransferase PFA3 OS=Gibberella zeae (stra...	[more]
ZDHC5_PONAB	7.558e-11	36.36	Palmitoyltransferase ZDHHC5 OS=Pongo abelii GN=ZDH...	[more]
ERFB_ASHGO	7.649e-11	46.77	Palmitoyltransferase ERF2 OS=Ashbya gossypii (stra...	[more]
ZDHC5_CANFA	8.248e-11	37.80	Palmitoyltransferase ZDHHC5 OS=Canis familiaris GN...	[more]
ZDH17_MOUSE	8.976e-11	41.54	Palmitoyltransferase ZDHHC17 OS=Mus musculus GN=Zd...	[more]
ZDH17_HUMAN	8.976e-11	41.54	Palmitoyltransferase ZDHHC17 OS=Homo sapiens GN=ZD...	[more]
ZDHC5_PANTR	9.403e-11	39.47	Palmitoyltransferase ZDHHC5 OS=Pan troglodytes GN=...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001594	Zinc finger, DHHC-type, palmitoyltransferase	PFAM	PF01529	zf-DHHC	coord: 91..209 e-value: 1.2E-30 score: 106.3
IPR001594	Zinc finger, DHHC-type, palmitoyltransferase	PROSITE	PS50216	ZF_DHHC	coord: 92..142 score: 22.267
None	No IPR available	PANTHER	PTHR22883:SF33	PALMITOYLTRANSFERASE ZDHHC12-RELATED	coord: 1..267
None	No IPR available	PANTHER	PTHR22883	ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN	coord: 1..267
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 137..159
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 14..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..17
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 194..274
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 171..193
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 160..170
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..13
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 18..136
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..17 score: 0.668
None	No IPR available	TMHMM	TMhelix		coord: 137..159
None	No IPR available	TMHMM	TMhelix		coord: 171..193

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0019462 ID=g.arboreum_cottongen_reftransV1_0019462; Name=g.arboreum_cottongen_reftransV1_0019462; organism=Gossypium arboreum; type=contig; length=1368bp
CATTAAAATTTTGCGGGTAAAGAATCAGTTCATAGATATGGTAAATGATA
TATTGCCCTATAATGTCAGCAGCAACGGCATGTTAAAACATCTAAGCAAG
TGTAGGGCCTTGACTTTTCTTCAAGCTCTTGAGCTGAGGGCAGAGGTTCC
AAACTGTATATGTTGCTTCCACCACAACAGAAGTCGTATAAATTGTGGCA
AACTCCTTTACTAAAAGGATATACTCGCTCAGGAATCCCCCTTAGATATG
GGATTCGCCTGCGTCTAACGAGTTCATAAGTTGTCTGATTTGTCAGAATA
AGATAGCTATGAAAAAATAGGAGGAGGAGTAGAAACACAATAAAAATTGA
CAAGGGAATCAATAGTAAAATCGCGATAGCATCATTCCACCAGGCCCTTG
ATATGTTGGCCTTCAGGTATGTAATGTACAAGATGCCAGTCCAGAGGCAC
AGCGCACTCTCTTCACAAATGTACCACCAAAATTTACAGTGATTACCCTG
GCCAATGCATGTTCCGAGCCATACACAATGGTGATCAAAGTGAAGAACAC
ATTTATCACAATCATAACAATGCTTCGCACGTGGAGGCTGTTCAACATTA
CAATAGGAGCAAATGCAAGACCTAACGGATGTTCCAGGGGGATACATGTC
CATAACCAACTTTGTCCAAGACGAAGGATTACTCCCTTGGAAATTTCTAC
CCGATTGACTCCCCTCTATGACAACATTCAAGCTTCCATTTTGGCTTGAA
GCAGGCTGTTTTGAGGCCATTGACGACTTCTGATATATCACATTCGTCTC
ATTAACAGCCCTCATTACATCAACAACATAACCAGGAGAAGAACTAGAAG
TAATAAAGTATTGTACCAATGTAGCAAGAAGCAACAACAAATATAAAGCA
GTGTACCAGGGTTCTTTTTTTCGTTTTATCTATCAAATCACTATCGAAAA
GGAAAAGAATGCCAACGTATACCAGATGCAGCATCACTAATGTCACTTTC
AAAACCAACGATGATCTCCGTGCAGGATCGGAGAGGCAAGGGAAGCAGTG
ATAACATCGGTCGAGAGCTCGATCGCGAAAGGAACGGCATATACCAATGA
CCATGGTCACCAAACAAATCCTCCCAACAACAAAAAAATTTCAAATCAAA
TCAAAACATTAAATGACACCACTCGTTGCATCACAATGCTCCTCTTTTGG
TTCTGTTTTTCCTGGTAAAGTTCTTGTTTGTCTCTTTTGCTAGCAAGATA
ATTTTTTCTAGGGAAAGTGACAGTAGAATAGAAATAGGCAAAGCCAAAAC
TATTTACTAGAAACGTAAAGGGAAAATAATACAGCTTGGGGAAGATTGCA
GATAAACTAAAAAATAAG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR001594	Palmitoyltrfase_DHHC

Vocabulary: **Molecular Function**
Term	Definition
GO:0008270	zinc ion binding

Search form

g.arboreum_cottongen_reftransV1_0019462, g.arboreum_cottongen_reftransV1_0019462 (contig) Gossypium arboreum

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