g.arboreum_cottongen_reftransV1_0011422, g.arboreum_cottongen_reftransV1_0011422 (contig) Gossypium arboreum
Overview
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A0D2S7Z7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G223000 PE=4 SV=1) HSP 1 Score: 345.125 bits (884), Expect = 6.953e-109 Identity = 167/171 (97.66%), Postives = 168/171 (98.25%), Query Frame = 2 Query: 2 KNMQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNSSVSKPINCGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSK 514 KNMQRKLRARQQYMISQVSLLYPVK LVGPAQE+ELESYPSSSRLGNSSVSKPIN GTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLD SWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSK Sbjct: 153 KNMQRKLRARQQYMISQVSLLYPVKSLVGPAQEEELESYPSSSRLGNSSVSKPINYGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDLSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSK 323
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A0D2T2M5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G223000 PE=4 SV=1) HSP 1 Score: 343.199 bits (879), Expect = 1.283e-107 Identity = 169/180 (93.89%), Postives = 172/180 (95.56%), Query Frame = 2 Query: 2 KNMQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNSSVSKPINCGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFI 541 KNMQRKLRARQQYMISQVSLLYPVK LVGPAQE+ELESYPSSSRLGNSSVSKPIN GTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLD SWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSK +L F+ Sbjct: 153 KNMQRKLRARQQYMISQVSLLYPVKSLVGPAQEEELESYPSSSRLGNSSVSKPINYGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDLSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKVSFHVLPFL 332
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A0D2UTV5_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G156400 PE=4 SV=1) HSP 1 Score: 352.058 bits (902), Expect = 9.684e-105 Identity = 201/244 (82.38%), Postives = 211/244 (86.48%), Query Frame = -2 Query: 953 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTAHGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAXXXXXXXXXXPGNAAFVQRPLAPSLPQTSSSHFSFTKPSMXXXXXXXXXXXXSLPSQHDGRRPFVSDEQWRMPAGEY---------IAGRNPPSAGPLFVQEA-YFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPA 1654 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNT HGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAQSSQPSQQFQPGNAAFVQRPLAPSLPQTSSSHFSFTKP+MPPHPQHSYP Q+DG RPFV+DEQWRMPAGEY I+GRNP GPLFV+EA YFRPP ER PS+N+ FP+ S N LPAGAPNSGHG+ PCRPD+S INCWRPA Sbjct: 714 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTPHGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAQSSQPSQQFQPGNAAFVQRPLAPSLPQTSSSHFSFTKPAMPPHPQHSYP-------QYDGWRPFVADEQWRMPAGEYNTDNQHGGWISGRNPSPCGPLFVREAGYFRPPVER-PSSNVGFPLTSANNLPAGAPNSGHGI---FPCRPDMSAINCWRPA 946 HSP 2 Score: 90.8929 bits (224), Expect = 1.378e-15 Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = -2 Query: 1901 VDGELEMEDVSGHLKNDQPFTNDALQMDWQQQGIMEPASNSSNE 2032 VDGELEMEDVSGHLKND+PFTN ALQMDWQQQGIMEPASNSSNE Sbjct: 589 VDGELEMEDVSGHLKNDRPFTNYALQMDWQQQGIMEPASNSSNE 632
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A0D2VMT7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G156400 PE=4 SV=1) HSP 1 Score: 358.607 bits (919), Expect = 1.380e-104 Identity = 200/243 (82.30%), Postives = 210/243 (86.42%), Query Frame = -2 Query: 953 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTAHGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAXXXXXXXXXXPGNAAFVQRPLAPSLPQTSSSHFSFTKPSMXXXXXXXXXXXXSLPSQHDGRRPFVSDEQWRMPAGEY---------IAGRNPPSAGPLFVQEAYFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPA 1654 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNT HGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAQSSQPSQQFQPGNAAFVQRPLAPSLPQTSSSHFSFTKP+MPPHPQHSYP Q+DG RPFV+DEQWRMPAGEY I+GRNP GPLFV+E YFRPP ER PS+N+ FP+ S N LPAGAPNSGHG+ PCRPD+S INCWRPA Sbjct: 1173 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTPHGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAQSSQPSQQFQPGNAAFVQRPLAPSLPQTSSSHFSFTKPAMPPHPQHSYP-------QYDGWRPFVADEQWRMPAGEYNTDNQHGGWISGRNPSPCGPLFVREGYFRPPVER-PSSNVGFPLTSANNLPAGAPNSGHGI---FPCRPDMSAINCWRPA 1404 HSP 2 Score: 91.2781 bits (225), Expect = 1.159e-15 Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = -2 Query: 1901 VDGELEMEDVSGHLKNDQPFTNDALQMDWQQQGIMEPASNSSNE 2032 VDGELEMEDVSGHLKND+PFTN ALQMDWQQQGIMEPASNSSNE Sbjct: 1048 VDGELEMEDVSGHLKNDRPFTNYALQMDWQQQGIMEPASNSSNE 1091
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A0D2UUK9_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G156400 PE=4 SV=1) HSP 1 Score: 355.525 bits (911), Expect = 1.540e-103 Identity = 201/244 (82.38%), Postives = 211/244 (86.48%), Query Frame = -2 Query: 953 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTAHGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAXXXXXXXXXXPGNAAFVQRPLAPSLPQTSSSHFSFTKPSMXXXXXXXXXXXXSLPSQHDGRRPFVSDEQWRMPAGEY---------IAGRNPPSAGPLFVQEA-YFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPA 1654 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNT HGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAQSSQPSQQFQPGNAAFVQRPLAPSLPQTSSSHFSFTKP+MPPHPQHSYP Q+DG RPFV+DEQWRMPAGEY I+GRNP GPLFV+EA YFRPP ER PS+N+ FP+ S N LPAGAPNSGHG+ PCRPD+S INCWRPA Sbjct: 1173 AIQSSPQLAYQPPVPHEFRGTPNGNQIVQMAGNTPHGGHIDASVKSELFPQQSPCFVPGVCNSREPSGYVSSRQLDYGHNEMYLNAQSSQPSQQFQPGNAAFVQRPLAPSLPQTSSSHFSFTKPAMPPHPQHSYP-------QYDGWRPFVADEQWRMPAGEYNTDNQHGGWISGRNPSPCGPLFVREAGYFRPPVER-PSSNVGFPLTSANNLPAGAPNSGHGI---FPCRPDMSAINCWRPA 1405 HSP 2 Score: 91.2781 bits (225), Expect = 1.139e-15 Identity = 42/44 (95.45%), Postives = 43/44 (97.73%), Query Frame = -2 Query: 1901 VDGELEMEDVSGHLKNDQPFTNDALQMDWQQQGIMEPASNSSNE 2032 VDGELEMEDVSGHLKND+PFTN ALQMDWQQQGIMEPASNSSNE Sbjct: 1048 VDGELEMEDVSGHLKNDRPFTNYALQMDWQQQGIMEPASNSSNE 1091
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: B9RWF6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1019110 PE=4 SV=1) HSP 1 Score: 324.324 bits (830), Expect = 1.172e-100 Identity = 151/209 (72.25%), Postives = 181/209 (86.60%), Query Frame = 2 Query: 2 KNMQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNSSVSKPINCGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELLRCVQSSEFIDT 628 +N+Q+ LR RQQY ISQVSLL+PVKI GP++EQELES+P++S+ GN + SKP+N G+LTILGLHLTM PFTK+SFFTDKKE+QKSATALGYVAHAVSLIASYL+VPLRYP+RLGGS SY+ND P A PT + S S VKPVEFPLFL+GQDTTRAAYA+FLL+KD+EQLLN+IG SLGPRH++ANLKEL+R +QS+EF+DT Sbjct: 148 RNLQKMLRIRQQYTISQVSLLFPVKISAGPSEEQELESFPNTSKSGNYTGSKPVNQGSLTILGLHLTMLPFTKISFFTDKKEIQKSATALGYVAHAVSLIASYLEVPLRYPVRLGGSRSYINDYAPSAEPTLPELSLSASSSTNVKPVEFPLFLEGQDTTRAAYAVFLLNKDLEQLLNYIGIKSLGPRHVLANLKELIRTIQSAEFLDT 356
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A067DTJ6_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018202mg PE=4 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 5.949e-100 Identity = 152/209 (72.73%), Postives = 176/209 (84.21%), Query Frame = 2 Query: 2 KNMQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNSSVSKPINCGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELLRCVQSSEFIDT 628 + +Q+ LR RQQ+MISQVS LYPVKILVGP QEQELES+PS +R GNS+ SKP+N G+LTILGLHLT+ PFTKMS FTDKKEVQ+SATALGY+AH VSLIASYL+VPLRYPLRLGGS +Y+ND P PT+ D S LS KP EFPLFL+GQD TRAAYA+FLL+KDIEQLLN+IG SLGPRH++ANLKELLR +QS E+IDT Sbjct: 71 QKLQKMLRMRQQFMISQVSFLYPVKILVGPKQEQELESFPSGNRSGNSAASKPVNPGSLTILGLHLTILPFTKMSLFTDKKEVQRSATALGYIAHVVSLIASYLEVPLRYPLRLGGSHTYINDYAPSIEPTS-DLSSNIALSTNTKPAEFPLFLEGQDATRAAYAVFLLNKDIEQLLNYIGVKSLGPRHVLANLKELLRTIQSPEYIDT 278
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: V4RJI9_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005271mg PE=4 SV=1) HSP 1 Score: 318.546 bits (815), Expect = 1.202e-99 Identity = 151/209 (72.25%), Postives = 176/209 (84.21%), Query Frame = 2 Query: 2 KNMQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNSSVSKPINCGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELLRCVQSSEFIDT 628 + +Q+ LR RQQ+MISQVS LYPVKILVGP QEQELES+PS +R GNS+ SKP+N G+LTILGLHLT+ PFTKMS FTDKKEVQ+SATA+GY+AH VSLIASYL+VPLRYPLRLGGS +Y+ND P PT+ D S LS KP EFPLFL+GQD TRAAYA+FLL+KDIEQLLN+IG SLGPRH++ANLKELLR +QS E+IDT Sbjct: 71 QKLQKMLRMRQQFMISQVSFLYPVKILVGPKQEQELESFPSGNRSGNSAASKPVNPGSLTILGLHLTILPFTKMSLFTDKKEVQRSATAMGYIAHVVSLIASYLEVPLRYPLRLGGSHTYINDYAPSIEPTS-DLSSNIALSTNTKPAEFPLFLEGQDATRAAYAVFLLNKDIEQLLNYIGVKSLGPRHVLANLKELLRTIQSPEYIDT 278
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: A0A067DPX0_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g018202mg PE=4 SV=1) HSP 1 Score: 319.701 bits (818), Expect = 6.882e-99 Identity = 152/209 (72.73%), Postives = 176/209 (84.21%), Query Frame = 2 Query: 2 KNMQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNSSVSKPINCGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELLRCVQSSEFIDT 628 + +Q+ LR RQQ+MISQVS LYPVKILVGP QEQELES+PS +R GNS+ SKP+N G+LTILGLHLT+ PFTKMS FTDKKEVQ+SATALGY+AH VSLIASYL+VPLRYPLRLGGS +Y+ND P PT+ D S LS KP EFPLFL+GQD TRAAYA+FLL+KDIEQLLN+IG SLGPRH++ANLKELLR +QS E+IDT Sbjct: 152 QKLQKMLRMRQQFMISQVSFLYPVKILVGPKQEQELESFPSGNRSGNSAASKPVNPGSLTILGLHLTILPFTKMSLFTDKKEVQRSATALGYIAHVVSLIASYLEVPLRYPLRLGGSHTYINDYAPSIEPTS-DLSSNIALSTNTKPAEFPLFLEGQDATRAAYAVFLLNKDIEQLLNYIGVKSLGPRHVLANLKELLRTIQSPEYIDT 359
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Match: V4SBB4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10005271mg PE=4 SV=1) HSP 1 Score: 319.316 bits (817), Expect = 9.778e-99 Identity = 151/209 (72.25%), Postives = 176/209 (84.21%), Query Frame = 2 Query: 2 KNMQRKLRARQQYMISQVSLLYPVKILVGPAQEQELESYPSSSRLGNSSVSKPINCGTLTILGLHLTMRPFTKMSFFTDKKEVQKSATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELLRCVQSSEFIDT 628 + +Q+ LR RQQ+MISQVS LYPVKILVGP QEQELES+PS +R GNS+ SKP+N G+LTILGLHLT+ PFTKMS FTDKKEVQ+SATA+GY+AH VSLIASYL+VPLRYPLRLGGS +Y+ND P PT+ D S LS KP EFPLFL+GQD TRAAYA+FLL+KDIEQLLN+IG SLGPRH++ANLKELLR +QS E+IDT Sbjct: 150 QKLQKMLRMRQQFMISQVSFLYPVKILVGPKQEQELESFPSGNRSGNSAASKPVNPGSLTILGLHLTILPFTKMSLFTDKKEVQRSATAMGYIAHVVSLIASYLEVPLRYPLRLGGSHTYINDYAPSIEPTS-DLSSNIALSTNTKPAEFPLFLEGQDATRAAYAVFLLNKDIEQLLNYIGVKSLGPRHVLANLKELLRTIQSPEYIDT 357
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy Swiss-Prot
Match: HUA2_ARATH (ENHANCER OF AG-4 protein 2 OS=Arabidopsis thaliana GN=HUA2 PE=2 SV=1) HSP 1 Score: 106.686 bits (265), Expect = 2.124e-22 Identity = 95/223 (42.60%), Postives = 132/223 (59.19%), Query Frame = -2 Query: 953 NGNQIVQMAGNTAHGGHIDASVKSELFPQQSPCFVP-GVCNSREPSGYVSSRQLDYGHNEMYLNAXXXXXXXXXXPGNAAFVQRPLAPSLPQTSSSHFSFTKPS-MXXXXXXXXXXXXSLPSQHDGRRPFVSDEQWRMPA---------GEYIAGRNPPSAGPLFVQEAYFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPA 1588 G+QIVQ GN++ GG ++ + K E F QQS F P GVC+SREPS + SSRQL++G++++ N ++S + +FQP + QRP+ LP SSHFS+ PS + QHSY Y P Q D R + ++E WR+P+ G +I GRN P V +++FRPP ERPPS M + ++ + L A GH MLP RPD+ T+NCWRPA Sbjct: 1175 TGDQIVQGPGNSSRGGLVEGAGKPEYFVQQSSSFSPAGVCSSREPSSFTSSRQLEFGNSDVLFNPEASSQNHRFQP-STPLSQRPMV-RLPSAPSSHFSY--PSHIQSQSQHSYTHPYPFPPQRDDARRYRNEEPWRIPSSGHSAENQNGAWIHGRNSHPGLPR-VTDSFFRPPPERPPSGTMNYQPSAASNLQAVPAIPGHTAPQMLPSRPDIPTVNCWRPA 1392
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy Swiss-Prot
Match: HUAL1_ARATH (HUA2-like protein 1 OS=Arabidopsis thaliana GN=At5g08230 PE=2 SV=1) HSP 1 Score: 104.76 bits (260), Expect = 9.533e-22 Identity = 88/240 (36.67%), Postives = 127/240 (52.92%), Query Frame = -2 Query: 953 QLAYQPPVPHEFRGTPNGNQIVQMAGNTAHGGHIDASVKSELFPQQSPCFVP-GVCNSREPSGYVSSRQLDYGHNEMYLNAXXXXXXXXXXPGNAAFVQRPLAPSLPQTSSSHFSF-TKPSMXXXXXXXXXXXXSLPSQ-HDGRRPFVSDEQWRMP---------AGEYIAGRNPPSAGPLFVQEAYFRPPGERPPSNNMAFPIASTNTLPAGAPNSGHGVSPMLPCRPDVSTINCWRPA 1636 Q YQ + + NQI + N AHG H D VKSE QS F P G+C+ EP ++SS+QL+YG++++ ++S +QQ +P N +F+QRP+ +L SSHF + + S+P Y PSQ DGR+ +E+WRMP G +I RN P G V + F+PP ERPPS + + +A+ N L G+ SG+ S ML RPDV + +RP+ Sbjct: 1210 QHEYQISMQRDHSSIATSNQIAPVPVNAAHGRHADGGVKSEYLMPQSSSFAPVGMCSYGEPLPFISSKQLEYGNSDVLFKQEASSQNQQLRPINTSFLQRPMIRNLAPAPSSHFPLPCRIVQSEPQRSSFPHPYHFPSQPVDGRQHM--NEEWRMPPNGCSADPQYGAWIGVRN-PFPGSRTVTDGVFQPPPERPPSGTVRYQLAA-NNLQGGSTISGNIASQMLLSRPDVPSAAQYRPS 1445
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy Swiss-Prot
Match: UVRAG_HUMAN (UV radiation resistance-associated gene protein OS=Homo sapiens GN=UVRAG PE=1 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 6.025e-11 Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 2 Query: 260 ATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELL 595 A ALGY AH VS+I+ +LQVPLRYP+ GS S + DN+ T K EFPL+ KG + + Y ++LL+K+I QL G + R + NLK + Sbjct: 361 AVALGYTAHLVSMISFFLQVPLRYPIIHKGSRSTIKDNIND--------------KLTEKEREFPLYPKGGEKLQFDYGVYLLNKNIAQLRYQHGLGTPDLRQTLPNLKNFM 458
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy Swiss-Prot
Match: UVRAG_MOUSE (UV radiation resistance associated protein OS=Mus musculus GN=Uvrag PE=1 SV=2) HSP 1 Score: 69.3218 bits (168), Expect = 7.663e-11 Identity = 43/112 (38.39%), Postives = 59/112 (52.68%), Query Frame = 2 Query: 260 ATALGYVAHAVSLIASYLQVPLRYPLRLGGSCSYVNDNVPPAGPTTLDFSWKTPLSATVKPVEFPLFLKGQDTTRAAYAIFLLSKDIEQLLNFIGEDSLGPRHLVANLKELL 595 A ALGY AH VS+I+ +LQVPLRYP+ GS S + DN+ T K EFPL+ KG + + Y ++LL+K+I QL G + R + NLK + Sbjct: 360 AVALGYTAHLVSMISFFLQVPLRYPIIHKGSRSTIKDNIND--------------KLTEKEREFPLYPKGGEKLQFDYGVYLLNKNIAQLRYQHGLGTPDLRQTLPNLKNFM 457 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0011422 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 4
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0011422 ID=g.arboreum_cottongen_reftransV1_0011422; Name=g.arboreum_cottongen_reftransV1_0011422; organism=Gossypium arboreum; type=contig; length=2033bpback to top |