g.arboreum_cottongen_reftransV1_0019635, g.arboreum_cottongen_reftransV1_0019635 (contig) Gossypium arboreum

Overview


Name	g.arboreum_cottongen_reftransV1_0019635
Unique Name	g.arboreum_cottongen_reftransV1_0019635
Type	contig
Organism	Gossypium arboreum (Tree cotton)
Sequence length	1706

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr7	chromosome	g.arboreum_cottongen_reftransV1_0019635:1..1706 . Chr7:30128615..30133654 -

Analyses

This contig is derived from or has results from the following analyses


Analysis Name	Date Performed
Gossypium arboreum CottonGen RefTrans V1	2016-11-14
InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1	2016-11-14
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL	2016-11-15
Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt	2016-11-15

Homology

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy TrEMBL
Match: A0A0D2VJH7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G074000 PE=3 SV=1)

HSP 1 Score: 895.96 bits (2314), Expect = 0.000e+0
Identity = 450/459 (98.04%), Postives = 452/459 (98.47%), Query Frame = 3

Query:   18 ERLLNGMGKDVGVPSWKHSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 1394
            ER LNG+GKD+GVPSWK SLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSA AKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSR SGVYLSVGGMLL VL FAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGL FLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE
Sbjct:   33 ERSLNGVGKDIGVPSWKRSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSATAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRSSGVYLSVGGMLLSVLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLLFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 491

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy TrEMBL
Match: A0A0D2RIC7_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G074000 PE=3 SV=1)

HSP 1 Score: 894.804 bits (2311), Expect = 0.000e+0
Identity = 449/459 (97.82%), Postives = 452/459 (98.47%), Query Frame = 3

Query:   18 ERLLNGMGKDVGVPSWKHSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 1394
            ER LNG+GKD+GVPSWK SLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSA AKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMV+AMFLQITSATSLVSR SGVYLSVGGMLL VL FAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGL FLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE
Sbjct:   33 ERSLNGVGKDIGVPSWKRSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSATAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVMAMFLQITSATSLVSRSSGVYLSVGGMLLSVLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLLFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 491

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy TrEMBL
Match: A0A0D2UQH4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_011G074000 PE=3 SV=1)

HSP 1 Score: 843.958 bits (2179), Expect = 0.000e+0
Identity = 428/459 (93.25%), Postives = 430/459 (93.68%), Query Frame = 3

Query:   18 ERLLNGMGKDVGVPSWKHSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 1394
            ER LNG+GKD+GVPSWK SLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAE                      DGVGRRRALQLCALPMIIGASMSA AKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSR SGVYLSVGGMLL VL FAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGL FLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE
Sbjct:   33 ERSLNGVGKDIGVPSWKRSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAE----------------------DGVGRRRALQLCALPMIIGASMSATAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRSSGVYLSVGGMLLSVLAFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLLFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 469

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy TrEMBL
Match: A0A061GIC7_THECC (Major facilitator superfamily protein isoform 1 OS=Theobroma cacao GN=TCM_028773 PE=3 SV=1)

HSP 1 Score: 780.4 bits (2014), Expect = 0.000e+0
Identity = 387/458 (84.50%), Postives = 418/458 (91.27%), Query Frame = 3

Query:   21 RLLNGMGKDVGVPSWKHSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 1394
            RLLNG GKD+G PSW  SL H+LVATLSS L+GYHLGVVNETLES+S DLGFHGNTMAEGLVVSTCLGGAFVGSLFSG IADGVGRRRA QLCALPMIIG+SMSA AK+LW MLLGRLFVG+GMGIGP VAALYVTEVSPAYVRGTYGS TQIAT LGLMG+LFIG PAK  EGWWRICFW S  PAA+LALFMEFS ESP WLFKRGR ADAEAEFEKLLGGPYVK AMAELSKSDRGDEADT +FSELLYG HRKV+FIGSTLFALQQLSGINAVFYFSSTVF+ AGVPSESAN+CVGIANL+GSFVA++LMD+LGRK+LLIGSFSGM VAM LQ TSA+SLVS  + VY+SVGGMLLFVLTFA+GAGPVP +LLSEMFPGR+RA A+S+CMA HW++NFFVGL FLRLLEQIGPLVLN+IFG FCLLAV+F+KKNVLETKGKSLQEIEIA LP E
Sbjct:   78 RLLNGAGKDIGNPSWNRSLPHILVATLSSLLFGYHLGVVNETLESMSHDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGSIADGVGRRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGSGMGIGPPVAALYVTEVSPAYVRGTYGSCTQIATCLGLMGALFIGLPAKETEGWWRICFWVSAVPAAMLALFMEFSAESPQWLFKRGRGADAEAEFEKLLGGPYVKGAMAELSKSDRGDEADTVRFSELLYGRHRKVIFIGSTLFALQQLSGINAVFYFSSTVFKNAGVPSESANICVGIANLIGSFVALLLMDKLGRKLLLIGSFSGMAVAMGLQATSASSLVSSSNEVYMSVGGMLLFVLTFAMGAGPVPGLLLSEMFPGRIRAKAMSICMAVHWVINFFVGLLFLRLLEQIGPLVLNTIFGTFCLLAVIFVKKNVLETKGKSLQEIEIAFLPPE 535

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy TrEMBL
Match: A0A061GAC8_THECC (Major facilitator superfamily protein isoform 2 OS=Theobroma cacao GN=TCM_028773 PE=3 SV=1)

HSP 1 Score: 778.859 bits (2010), Expect = 0.000e+0
Identity = 387/458 (84.50%), Postives = 418/458 (91.27%), Query Frame = 3

Query:   21 RLLNGMGKDVGVPSWKHSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 1394
            RLLNG GKD+G PSW  SL H+LVATLSS L+GYHLGVVNETLES+S DLGFHGNTMAEGLVVSTCLGGAFVGSLFSG IADGVGRRRA QLCALPMIIG+SMSA AK+LW MLLGRLFVG+GMGIGP VAALYVTEVSPAYVRGTYGS TQIAT LGLMG+LFIG PAK  EGWWRICFW S  PAA+LALFMEFS ESP WLFKRGR ADAEAEFEKLLGGPYVK AMAELSKSDRGDEADT +FSELLYG HRKV+FIGSTLFALQQLSGINAVFYFSSTVF+ AGVPSESAN+CVGIANL+GSFVA++LMD+LGRK+LLIGSFSGM VAM LQ TSA+SLVS  + VY+SVGGMLLFVLTFA+GAGPVP +LLSEMFPGR+RA A+S+CMA HW++NFFVGL FLRLLEQIGPLVLN+IFG FCLLAV+F+KKNVLETKGKSLQEIEIA LP E
Sbjct:   33 RLLNGAGKDIGNPSWNRSLPHILVATLSSLLFGYHLGVVNETLESMSHDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGSIADGVGRRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGSGMGIGPPVAALYVTEVSPAYVRGTYGSCTQIATCLGLMGALFIGLPAKETEGWWRICFWVSAVPAAMLALFMEFSAESPQWLFKRGRGADAEAEFEKLLGGPYVKGAMAELSKSDRGDEADTVRFSELLYGRHRKVIFIGSTLFALQQLSGINAVFYFSSTVFKNAGVPSESANICVGIANLIGSFVALLLMDKLGRKLLLIGSFSGMAVAMGLQATSASSLVSSSNEVYMSVGGMLLFVLTFAMGAGPVPGLLLSEMFPGRIRAKAMSICMAVHWVINFFVGLLFLRLLEQIGPLVLNTIFGTFCLLAVIFVKKNVLETKGKSLQEIEIAFLPPE 490

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy TrEMBL
Match: A0A0D2MK31_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G064700 PE=3 SV=1)

HSP 1 Score: 736.873 bits (1901), Expect = 0.000e+0
Identity = 365/458 (79.69%), Postives = 408/458 (89.08%), Query Frame = 3

Query:   21 RLLNGMGKDVGVPSWKHSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 1394
            R LNG+ K++G PSWK S  ++LVA+L+SFLYGYHLGV+NETLESIS DL F+GNTMAEGLVVS CLGG F+GS FSGLI D VG RRA QLCALPMIIG+SMSA AK+LW MLLGRLFVGTGMG+GP +A LYVTEVSPAYVRGTYGSFTQIAT LGLM SL IGFPAK  EGWWRICFW S  PAA+LALFMEFS ESPHWLFK+GRAADAEA FEKLLGGPYVK AMAELSKS+RG EA+T K SELL+GHHRKVVFIGSTLFALQQLSGIN+VF+FSSTVF++AGV S+SAN+CVGIAN LGSF A++LMD+LGRKVLLIGSFSGM+VAM LQ  SA+SLVS  + VYLSVGGMLLFVL F++GAGPVPS+LLSEMFPGR+RA A+SVC+A HW+VNFFVGL FLRLLEQIGPLVLN+IF  FCL+AV+F+K+NVLETKGKSLQEIEI LLP E
Sbjct:   52 RSLNGVSKEIGNPSWKRSFLYILVASLASFLYGYHLGVINETLESISNDLHFNGNTMAEGLVVSICLGGGFLGSTFSGLIVDRVGFRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGTGMGLGPTLATLYVTEVSPAYVRGTYGSFTQIATSLGLMSSLLIGFPAKETEGWWRICFWVSAVPAALLALFMEFSPESPHWLFKKGRAADAEAAFEKLLGGPYVKGAMAELSKSERGGEAETVKLSELLFGHHRKVVFIGSTLFALQQLSGINSVFFFSSTVFKSAGVSSQSANICVGIANFLGSFAALLLMDKLGRKVLLIGSFSGMIVAMGLQAASASSLVSSSNEVYLSVGGMLLFVLAFSVGAGPVPSLLLSEMFPGRIRAKAMSVCLASHWVVNFFVGLLFLRLLEQIGPLVLNTIFATFCLVAVIFVKRNVLETKGKSLQEIEITLLPPE 509

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy TrEMBL
Match: A0A0D2QGG6_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G064700 PE=3 SV=1)

HSP 1 Score: 736.102 bits (1899), Expect = 0.000e+0
Identity = 367/463 (79.27%), Postives = 410/463 (88.55%), Query Frame = 3

Query:    6 MGF*ERLLNGMGKDVGVPSWKHSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 1394
            M F  R LNG+ K++G PSWK S  ++LVA+L+SFLYGYHLGV+NETLESIS DL F+GNTMAEGLVVS CLGG F+GS FSGLI D VG RRA QLCALPMIIG+SMSA AK+LW MLLGRLFVGTGMG+GP +A LYVTEVSPAYVRGTYGSFTQIAT LGLM SL IGFPAK  EGWWRICFW S  PAA+LALFMEFS ESPHWLFK+GRAADAEA FEKLLGGPYVK AMAELSKS+RG EA+T K SELL+GHHRKVVFIGSTLFALQQLSGIN+VF+FSSTVF++AGV S+SAN+CVGIAN LGSF A++LMD+LGRKVLLIGSFSGM+VAM LQ  SA+SLVS  + VYLSVGGMLLFVL F++GAGPVPS+LLSEMFPGR+RA A+SVC+A HW+VNFFVGL FLRLLEQIGPLVLN+IF  FCL+AV+F+K+NVLETKGKSLQEIEI LLP E
Sbjct:   12 MVFYVRSLNGVSKEIGNPSWKRSFLYILVASLASFLYGYHLGVINETLESISNDLHFNGNTMAEGLVVSICLGGGFLGSTFSGLIVDRVGFRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGTGMGLGPTLATLYVTEVSPAYVRGTYGSFTQIATSLGLMSSLLIGFPAKETEGWWRICFWVSAVPAALLALFMEFSPESPHWLFKKGRAADAEAAFEKLLGGPYVKGAMAELSKSERGGEAETVKLSELLFGHHRKVVFIGSTLFALQQLSGINSVFFFSSTVFKSAGVSSQSANICVGIANFLGSFAALLLMDKLGRKVLLIGSFSGMIVAMGLQAASASSLVSSSNEVYLSVGGMLLFVLAFSVGAGPVPSLLLSEMFPGRIRAKAMSVCLASHWVVNFFVGLLFLRLLEQIGPLVLNTIFATFCLVAVIFVKRNVLETKGKSLQEIEITLLPPE 474

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy TrEMBL
Match: A0A0D2NX69_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G064700 PE=3 SV=1)

HSP 1 Score: 736.102 bits (1899), Expect = 0.000e+0
Identity = 365/458 (79.69%), Postives = 408/458 (89.08%), Query Frame = 3

Query:   21 RLLNGMGKDVGVPSWKHSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 1394
            R LNG+ K++G PSWK S  ++LVA+L+SFLYGYHLGV+NETLESIS DL F+GNTMAEGLVVS CLGG F+GS FSGLI D VG RRA QLCALPMIIG+SMSA AK+LW MLLGRLFVGTGMG+GP +A LYVTEVSPAYVRGTYGSFTQIAT LGLM SL IGFPAK  EGWWRICFW S  PAA+LALFMEFS ESPHWLFK+GRAADAEA FEKLLGGPYVK AMAELSKS+RG EA+T K SELL+GHHRKVVFIGSTLFALQQLSGIN+VF+FSSTVF++AGV S+SAN+CVGIAN LGSF A++LMD+LGRKVLLIGSFSGM+VAM LQ  SA+SLVS  + VYLSVGGMLLFVL F++GAGPVPS+LLSEMFPGR+RA A+SVC+A HW+VNFFVGL FLRLLEQIGPLVLN+IF  FCL+AV+F+K+NVLETKGKSLQEIEI LLP E
Sbjct:   50 RSLNGVSKEIGNPSWKRSFLYILVASLASFLYGYHLGVINETLESISNDLHFNGNTMAEGLVVSICLGGGFLGSTFSGLIVDRVGFRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGTGMGLGPTLATLYVTEVSPAYVRGTYGSFTQIATSLGLMSSLLIGFPAKETEGWWRICFWVSAVPAALLALFMEFSPESPHWLFKKGRAADAEAAFEKLLGGPYVKGAMAELSKSERGGEAETVKLSELLFGHHRKVVFIGSTLFALQQLSGINSVFFFSSTVFKSAGVSSQSANICVGIANFLGSFAALLLMDKLGRKVLLIGSFSGMIVAMGLQAASASSLVSSSNEVYLSVGGMLLFVLAFSVGAGPVPSLLLSEMFPGRIRAKAMSVCLASHWVVNFFVGLLFLRLLEQIGPLVLNTIFATFCLVAVIFVKRNVLETKGKSLQEIEITLLPPE 507

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy TrEMBL
Match: A0A0D2RHR3_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G064700 PE=3 SV=1)

HSP 1 Score: 735.332 bits (1897), Expect = 0.000e+0
Identity = 365/458 (79.69%), Postives = 408/458 (89.08%), Query Frame = 3

Query:   21 RLLNGMGKDVGVPSWKHSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 1394
            R LNG+ K++G PSWK S  ++LVA+L+SFLYGYHLGV+NETLESIS DL F+GNTMAEGLVVS CLGG F+GS FSGLI D VG RRA QLCALPMIIG+SMSA AK+LW MLLGRLFVGTGMG+GP +A LYVTEVSPAYVRGTYGSFTQIAT LGLM SL IGFPAK  EGWWRICFW S  PAA+LALFMEFS ESPHWLFK+GRAADAEA FEKLLGGPYVK AMAELSKS+RG EA+T K SELL+GHHRKVVFIGSTLFALQQLSGIN+VF+FSSTVF++AGV S+SAN+CVGIAN LGSF A++LMD+LGRKVLLIGSFSGM+VAM LQ  SA+SLVS  + VYLSVGGMLLFVL F++GAGPVPS+LLSEMFPGR+RA A+SVC+A HW+VNFFVGL FLRLLEQIGPLVLN+IF  FCL+AV+F+K+NVLETKGKSLQEIEI LLP E
Sbjct:   31 RSLNGVSKEIGNPSWKRSFLYILVASLASFLYGYHLGVINETLESISNDLHFNGNTMAEGLVVSICLGGGFLGSTFSGLIVDRVGFRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGTGMGLGPTLATLYVTEVSPAYVRGTYGSFTQIATSLGLMSSLLIGFPAKETEGWWRICFWVSAVPAALLALFMEFSPESPHWLFKKGRAADAEAAFEKLLGGPYVKGAMAELSKSERGGEAETVKLSELLFGHHRKVVFIGSTLFALQQLSGINSVFFFSSTVFKSAGVSSQSANICVGIANFLGSFAALLLMDKLGRKVLLIGSFSGMIVAMGLQAASASSLVSSSNEVYLSVGGMLLFVLAFSVGAGPVPSLLLSEMFPGRIRAKAMSVCLASHWVVNFFVGLLFLRLLEQIGPLVLNTIFATFCLVAVIFVKRNVLETKGKSLQEIEITLLPPE 488

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy TrEMBL
Match: A0A0D2NX78_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_003G064700 PE=3 SV=1)

HSP 1 Score: 735.332 bits (1897), Expect = 0.000e+0
Identity = 365/458 (79.69%), Postives = 408/458 (89.08%), Query Frame = 3

Query:   21 RLLNGMGKDVGVPSWKHSLRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPSE 1394
            R LNG+ K++G PSWK S  ++LVA+L+SFLYGYHLGV+NETLESIS DL F+GNTMAEGLVVS CLGG F+GS FSGLI D VG RRA QLCALPMIIG+SMSA AK+LW MLLGRLFVGTGMG+GP +A LYVTEVSPAYVRGTYGSFTQIAT LGLM SL IGFPAK  EGWWRICFW S  PAA+LALFMEFS ESPHWLFK+GRAADAEA FEKLLGGPYVK AMAELSKS+RG EA+T K SELL+GHHRKVVFIGSTLFALQQLSGIN+VF+FSSTVF++AGV S+SAN+CVGIAN LGSF A++LMD+LGRKVLLIGSFSGM+VAM LQ  SA+SLVS  + VYLSVGGMLLFVL F++GAGPVPS+LLSEMFPGR+RA A+SVC+A HW+VNFFVGL FLRLLEQIGPLVLN+IF  FCL+AV+F+K+NVLETKGKSLQEIEI LLP E
Sbjct:   29 RSLNGVSKEIGNPSWKRSFLYILVASLASFLYGYHLGVINETLESISNDLHFNGNTMAEGLVVSICLGGGFLGSTFSGLIVDRVGFRRAFQLCALPMIIGSSMSATAKNLWGMLLGRLFVGTGMGLGPTLATLYVTEVSPAYVRGTYGSFTQIATSLGLMSSLLIGFPAKETEGWWRICFWVSAVPAALLALFMEFSPESPHWLFKKGRAADAEAAFEKLLGGPYVKGAMAELSKSERGGEAETVKLSELLFGHHRKVVFIGSTLFALQQLSGINSVFFFSSTVFKSAGVSSQSANICVGIANFLGSFAALLLMDKLGRKVLLIGSFSGMIVAMGLQAASASSLVSSSNEVYLSVGGMLLFVLAFSVGAGPVPSLLLSEMFPGRIRAKAMSVCLASHWVVNFFVGLLFLRLLEQIGPLVLNTIFATFCLVAVIFVKRNVLETKGKSLQEIEITLLPPE 486

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy Swiss-Prot
Match: XYLE_ECO57 (D-xylose-proton symporter OS=Escherichia coli O157:H7 GN=xylE PE=3 SV=1)

HSP 1 Score: 181.03 bits (458), Expect = 1.551e-48
Identity = 144/479 (30.06%), Postives = 234/479 (48.85%), Query Frame = 3

Query:   87 LVATLSSFLYGYHLGVVNETLESIS------RDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSA------------------AAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLM----GSLFIGFPAKAIEGW-----WRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKS-DRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESA---NMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLN-------SIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALLPS 1391
            LVATL   L+GY   V++ T+ES++      ++L         G  V++ L G  +G    G  ++  GRR +L++ A+   I    SA                   A  +   ++ R+  G G+G+   ++ +Y+ E++PA++RG   SF Q A   G +     + FI     A   W     WR  F +   PA +  + +    ESP WL  RG+   AE    K++G      A+ E+  S D G +        L++G    V+ IG  L   QQ  GIN V Y++  VF+T G  ++ A    + VG+ NL  + +A++ +D+ GRK L I    GM + MF   +  T+  ++  G+ +++  ML +V  FA+  GPV  +LLSE+FP  +R  A+++ +A  W+ N+FV   F  ++++   LV +        I+G   +LA LF+ K V ETKGK+L+E+E    P 
Sbjct:   15 LVATLGGLLFGYDTAVISGTVESLNTVFVAPQNLSESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISGVGSAWPELGFTSINPDNTVPVYLAGYVPEFVIYRIIGGIGVGLASMLSPMYIAELAPAHIRGKLVSFNQFAIIFGQLLVYCVNYFIARSGDA--SWLNTDGWRYMFASECIPALLFLMLLYTVPESPRWLMSRGKQEQAEGILRKIMGNTLATQAVQEIKHSLDHGRKTGG---RLLMFG--VGVIVIGVMLSIFQQFVGINVVLYYAPEVFKTLGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMF---SLGTAFYTQAPGI-VALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIRGKALAIAVAAQWLANYFVSWTF-PMMDKNSWLVAHFHNGFSYWIYGCMGVLAALFMWKFVPETKGKTLEELEALWEPE 481

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy Swiss-Prot
Match: XYLL2_ARATH (D-xylose-proton symporter-like 2 OS=Arabidopsis thaliana GN=At5g17010 PE=1 SV=1)

HSP 1 Score: 180.259 bits (456), Expect = 4.115e-48
Identity = 139/452 (30.75%), Postives = 237/452 (52.43%), Query Frame = 3

Query:   87 LVATLSSFLYGYHLGVVN-ETLESISRDLG----FHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEK---------LLGGPYVKSAMAELSK-----SDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGV----PSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIE 1373
            L   L   LYGY +G  +  T+   S  L     ++ +++  GLV S  L GA  GS+ +  IAD +GRR+ L L AL  ++GA ++A A +   +++GR+  G  +G+    A +Y+ E +P+ +RG   S  +    LG++G   IG     +   WR  +  SV  A I+ + M +   SP WL  R        E ++         L G  +V SA  ++++     +  G++ +   F EL  G   K + IG  L   QQ++G  +V Y++ ++ +TAG      +   ++ +G+  L+ + VA++++DRLGR+ LL+G   GMVV++FL    +  L    S V ++V  +LL+V  + +  GP+  +++SE+FP ++R   +S+ +  ++  N  V   F  L E +G  +L   FG  C+L+++FI   V ETKG +L+EIE
Sbjct:   52 LFPALGGLLYGYEIGATSCATISLQSPSLSGISWYNLSSVDVGLVTSGSLYGALFGSIVAFTIADVIGRRKELILAALLYLVGALVTALAPTYSVLIIGRVIYGVSVGLAMHAAPMYIAETAPSPIRGQLVSLKEFFIVLGMVGGYGIGSLTVNVHSGWRYMYATSVPLAVIMGIGMWWLPASPRWLLLRVIQGKGNVENQREAAIKSLCCLRGPAFVDSAAEQVNEILAELTFVGEDKEV-TFGELFQGKCLKALIIGGGLVLFQQITGQPSVLYYAPSILQTAGFSAAGDATRVSILLGLLKLIMTGVAVVVIDRLGRRPLLLGGVGGMVVSLFL--LGSYYLFFSASPV-VAVVALLLYVGCYQLSFGPIGWLMISEIFPLKLRGRGLSLAVLVNFGANALVTFAFSPLKELLGAGILFCGFGVICVLSLVFIFFIVPETKGLTLEEIE 499

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy Swiss-Prot
Match: ERDL4_ARATH (Sugar transporter ERD6-like 4 OS=Arabidopsis thaliana GN=At1g19450 PE=2 SV=1)

HSP 1 Score: 178.333 bits (451), Expect = 1.310e-47
Identity = 140/446 (31.39%), Postives = 233/446 (52.24%), Query Frame = 3

Query:   75 LRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLG-GAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDR----GDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSES-ANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITS--ATSLVSRGSGVY-----LSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIE 1373
            L  VL+  L    +G+  G  + T  +I++DLG    T++E  V  +    GA VG++ SG IA+ VGR+ +L + A+P IIG    + AK    + +GRL  G G+GI      +Y+ E++P  +RG  GS  Q++  +G+M +  +G         WRI     V P  +L   + F  ESP WL K G   D E   + L G  +      E+++  R      +    +F +L    +   + +G  L ALQQL GIN V ++SST+FE+AGV S + A   VG+  ++ + +A  L+D+ GR++LL+ S  GM +++ +   +      VS  S +Y     +SV G++  V++ ++G GP+P +++SE+ P  ++  A S+    +W V++ V +    LL         +++   C   V+F+   V ETKGK+L+EI+
Sbjct:   50 LACVLIVALGPIQFGFTCGYSSPTQAAITKDLGL---TVSEYSVFGSLSNVGAMVGAIASGQIAEYVGRKGSLMIAAIPNIIGWLSISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQTMRGALGSVNQLSVTIGIMLAYLLGLFVP-----WRILAVLGVLPCTLLIPGLFFIPESPRWLAKMGLTDDFETSLQVLRG--FETDITVEVNEIKRSVASSSKRSAVRFVDLKRRRYYFPLMVGIGLLALQQLGGINGVLFYSSTIFESAGVTSSNVATFGVGVVQVVATGIATWLVDKAGRRLLLMISSIGMTISLVIVAVAFYLKEFVSPDSNMYNILSMVSVVGVVAMVISCSLGMGPIPWLIMSEILPVNIKGLAGSIATLLNWFVSWLVTMTANMLLAWSSGGTF-TLYALVCGFTVVFVSLWVPETKGKTLEEIQ 484

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy Swiss-Prot
Match: ERDL6_ARATH (Sugar transporter ERD6-like 6 OS=Arabidopsis thaliana GN=At1g75220 PE=1 SV=1)

HSP 1 Score: 176.407 bits (446), Expect = 6.020e-47
Identity = 139/453 (30.68%), Postives = 233/453 (51.43%), Query Frame = 3

Query:   75 LRHVLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLG-GAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDR----GDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVP-SESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITS--ATSLVSRGSGVY-----LSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLN-------SIFGAFCLLAVLFIKKNVLETKGKSLQEIE 1373
            L  VL+  L    +G+  G  + T  +I++DLG    T++E  V  +    GA VG++ SG IA+ +GR+ +L + A+P IIG    + AK    + +GRL  G G+GI      +Y+ E++P  +RG  GS  Q++  +G+M +  +G         WRI     + P  +L   + F  ESP WL K G   + E   + L G  +      E+++  R      + +T +F +L    +   + +G  L  LQQL GIN V ++SST+FE+AGV  S +A   VG   ++ + ++  L+D+ GR++LL  S  GM +++ +   +      VS  S +Y     LSV G++  V+ F++G GP+P +++SE+ P  ++  A S+    +W        FF  L+     L+L        +++G  C   V+F+   V ETKGK+L+E++
Sbjct:   49 LACVLIVALGPIQFGFTCGYSSPTQAAITKDLGL---TVSEYSVFGSLSNVGAMVGAIASGQIAEYIGRKGSLMIAAIPNIIGWLCISFAKDTSFLYMGRLLEGFGVGIISYTVPVYIAEIAPQNMRGGLGSVNQLSVTIGIMLAYLLGLFVP-----WRILAVLGILPCTLLIPGLFFIPESPRWLAKMGMTDEFETSLQVLRG--FETDITVEVNEIKRSVASSTKRNTVRFVDLKRRRYYFPLMVGIGLLVLQQLGGINGVLFYSSTIFESAGVTSSNAATFGVGAIQVVATAISTWLVDKAGRRLLLTISSVGMTISLVIVAAAFYLKEFVSPDSDMYSWLSILSVVGVVAMVVFFSLGMGPIPWLIMSEILPVNIKGLAGSIATLANW--------FFSWLITMTANLLLAWSSGGTFTLYGLVCAFTVVFVTLWVPETKGKTLEELQ 483

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy Swiss-Prot
Match: XYLL3_ARATH (D-xylose-proton symporter-like 3, chloroplastic OS=Arabidopsis thaliana GN=At5g59250 PE=2 SV=2)

HSP 1 Score: 173.326 bits (438), Expect = 2.035e-45
Identity = 142/467 (30.41%), Postives = 232/467 (49.68%), Query Frame = 3

Query:   60 SWKHSLRHVLVATLSSFLYGYHLGVVNE---TLES--ISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAE---------FEKLLGGPYVKSAMAEL-------SKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAG----VPSESANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIEIALL 1385
            SW   +   +   L   L+GY +G  +    +L+S  +S    F+ + +  GLVVS  L GA +GS+    +AD +GRRR L + A+  ++G+ ++  A  L  +L+GRL  G G+G+    A LY+ E  P+ +RGT  S  ++   LG++    +G     + G WR  +      A ++ L M     SP WL  R      + +           KL G P       +L        K+   DE     F E+  G + K + IG  L   QQ++G  +V Y++ ++ +TAG      +   ++ +G+  LL ++VA+  +D LGR+ LLIG  SG+ +++FL       L   G    ++VG +LL+V  + I  GP+  +++SE+FP R R   +S+ +  ++  N  V   F  L E +G   L  +FG   L+++LF+   V ETKG SL+EIE  +L
Sbjct:   94 SWSSVILPFIFPALGGLLFGYDIGATSGATLSLQSPALSGTTWFNFSPVQLGLVVSGSLYGALLGSISVYGVADFLGRRRELIIAAVLYLLGSLITGCAPDLNILLVGRLLYGFGIGLAMHGAPLYIAETCPSQIRGTLISLKELFIVLGILLGFSVGSFQIDVVGGWRYMYGFGTPVALLMGLGMWSLPASPRWLLLRAVQGKGQLQEYKEKAMLALSKLRGRPPGDKISEKLVDDAYLSVKTAYEDEKSGGNFLEVFQGPNLKALTIGGGLVLFQQITGQPSVLYYAGSILQTAGFSAAADATRVSVIIGVFKLLMTWVAVAKVDDLGRRPLLIGGVSGIALSLFLLSAYYKFL---GGFPLVAVGALLLYVGCYQISFGPISWLMVSEIFPLRTRGRGISLAVLTNFGSNAIVTFAFSPLKEFLGAENLFLLFGGIALVSLLFVILVVPETKGLSLEEIESKIL 557

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy Swiss-Prot
Match: IOLT_BACSU (Major myo-inositol transporter IolT OS=Bacillus subtilis (strain 168) GN=iolT PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.433e-45
Identity = 137/447 (30.65%), Postives = 220/447 (49.22%), Query Frame = 3

Query:   84 VLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGW--------WRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSD----RGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSESA---NMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGS-GVYLSVGGMLLFVLTFAIGA-GPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIE 1373
            +LV+T    L+GY  GV+N  L  +      + N   EGLV S+ L GA +G++F G ++D  GRR+ +   A+   I       A ++  M++ R  +G  +G        Y+ E+SP   RG   +  +    L ++    + F   AI G         WR     +  PA  L   M    ESP WL  +GR  DA    +K+      K A AEL + +    + D+ +   F +L     R++VFIG  +  +QQ++G+N++ Y+ + +   +G  +E+A   N+  G+ ++L +FV + L+ R+GR+ +L+    G   A+ L      SLV  GS  +   V  + +  L F  GA  PV  ++LSE+FP R+R   + V +   W+VNF V   F  LL  IG      IF    + +VLF+K+ + ETKG SL+++E
Sbjct:   15 ILVSTFGGLLFGYDTGVLNGALPYMGEPDQLNLNAFTEGLVTSSLLFGAALGAVFGGRMSDFNGRRKNILFLAVIFFISTIGCTFAPNVTVMIISRFVLGIAVGGASVTVPAYLAEMSPVESRGRMVTQNE----LMIVSGQLLAFVFNAILGTTMGDNSHVWRFMLVIASLPALFLFFGMIRMPESPRWLVSKGRKEDALRVLKKIRDE---KRAAAELQEIEFAFKKEDQLEKATFKDLSVPWVRRIVFIGLGIAIVQQITGVNSIMYYGTEILRNSGFQTEAALIGNIANGVISVLATFVGIWLLGRVGRRPMLMTGLIGTTTALLL--IGIFSLVLEGSPALPYVVLSLTVTFLAFQQGAISPVTWLMLSEIFPLRLRGLGMGVTVFCLWMVNFAVSFTFPILLAAIGLSTTFFIFVGLGICSVLFVKRFLPETKGLSLEQLE 452

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy Swiss-Prot
Match: GTR8_BOVIN (Solute carrier family 2, facilitated glucose transporter member 8 OS=Bos taurus GN=SLC2A8 PE=2 SV=2)

HSP 1 Score: 171.785 bits (434), Expect = 2.815e-45
Identity = 130/391 (33.25%), Postives = 201/391 (51.41%), Query Frame = 3

Query:  264 DGVGRRRALQLCALPMIIGASMSAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAEFEKLLGGPYVKSAMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSES-ANMCVGIANLLGSFVAMILMDRLGRKVLLIGS-----FSGMVVAMFLQITSA----------TSLVSRGSG------VYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEI 1370
            D  GR+ +L LCALP + G ++  AA++LW +L GRL  G   GI   VA +Y++E++   VRG  GS  Q+    G++ +   G+    +E  WR        P + + L M F  E+P +L  + +  +A A  + L G  Y +       +   G +   F  ++L      K   IG +L A QQLSG+NAV +++ T+FE A     S A++ VG+  +L +  A ++MDR GR++LL  S     FS      + ++T             +LVS  +        +L+VG M LF+  FA+G GP+P +L+SE+FP  V+  A  VC+  +W + F V   F  L+E + P     +  AFC+  VLF    V ETKGK+L++I
Sbjct:   92 DRAGRKLSLVLCALPFVAGFAVITAAQNLWMLLGGRLLTGLACGIASLVAPVYISEIAYPEVRGLLGSCVQLMVVTGILLAYLAGW---VLE--WRWLAVLGCVPPSFMLLLMCFMPETPRFLLSQHKHQEAMAAMQFLWG--YAQG----WEEPPLGAQHQDFHVAQLRRPGVYKPFIIGISLMAFQQLSGVNAVMFYAETIFEEAKFKDSSLASVVVGVIQVLFTATAALIMDRAGRRLLLTLSGVVMVFSTSAFGTYFKLTEGGPSNSSHVDLPALVSMEAADTNVGLAWLAVGSMCLFIAGFAVGWGPIPWLLMSEIFPLHVKGVATGVCVLTNWFMAFLVTKEFSSLMEVLRPYGAFWLASAFCIFGVLFTLACVPETKGKTLEQI 471

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy Swiss-Prot
Match: GTR3_CANFA (Solute carrier family 2, facilitated glucose transporter member 3 OS=Canis familiaris GN=SLC2A3 PE=2 SV=1)

HSP 1 Score: 171.785 bits (434), Expect = 2.825e-45
Identity = 130/448 (29.02%), Postives = 218/448 (48.66%), Query Frame = 3

Query:   90 VATLSSFLYGYHLGVVNETLESISRD-LGFHGNTMAEGLVVSTCLG------------GAFVGSLFSGLIADGVGRRRALQLCALPMIIGASM---SAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPA-KAIEGWWRICFWASVAPAAILALFMEFSVESPHWLF-KRGRAADAEAEFEKLLGGPYVKSAMAEL-SKSDRGDEADTFKFSELLYGH-HRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSE-SANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEI 1370
            +AT+ SF +GY+ GV+N   E+I +D L +     +E L     L             G  +GS   GL  +  GRR ++ +  L  + G  +      A+S+  ++LGRL +G   G+      +Y+ E+SP  +RG +G+  Q+   +G++ +   G       E  W +    ++ PA + +  + F  ESP +L   R    +A+   ++L G   V   + E+  +S R  +       EL     +R+ + I   L   QQLSGINAVFY+S+ +F+ AGV     A +  G+ N + + V++ L++R GR+ L +    GM V   L   S     +     ++ +G +L+FV  F IG GP+P  +++E+F    R  A++V    +W  NF VGL F      +G  V   IF  F ++ ++F    V ET+G++ +EI
Sbjct:   16 IATIGSFQFGYNTGVINAP-ETIIKDFLNYTLEEKSENLPTEVLLTSLWSLSVAIFSVGGMIGSFSVGLFVNRFGRRNSMLMVNLLAVAGGCLMGFCKIAQSVEMLILGRLIIGLFCGLCTGFVPMYIGEISPTALRGAFGTLNQLGIVIGILVAQIFGLKVIMGTEELWPLLLGFTIIPAVLQSAALPFCPESPRFLLINRKEEENAKEILQRLWGTQDVSQDIQEMKDESARMAQEKQVTVLELFRSRSYRQPIIISIMLQLSQQLSGINAVFYYSTGIFKDAGVEEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSILMTISLLLKDNYNWMSFVCIGAILVFVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGLLFPSAAFYLGAYVF-IIFTGFLIVFLVFTFFKVPETRGRTFEEI 461

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy Swiss-Prot
Match: FGT1_CAEEL (Facilitated glucose transporter protein 1 OS=Caenorhabditis elegans GN=fgt-1 PE=1 SV=2)

HSP 1 Score: 171.4 bits (433), Expect = 4.964e-45
Identity = 142/458 (31.00%), Postives = 225/458 (49.13%), Query Frame = 3

Query:   90 VATLSSFLYGYHLGVVN------------ETLESISRDLGFHGNTMAEGLVVSTCLGGAFVGSLFSGLIADGVGRRRALQLCALPMIIGASMSAAAKSLWA---MLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFPAKAIEG-WWRICFWASVAPAAILALFMEFSVESPHWLFK-RGRAADAEAEFEKLLGGPYVKS---AMAELSKSDRGDEADTFKFSELLYGHHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSES---ANMCVGIANLLGSFVAMILMD--RLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGS--GVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFL---RLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEIE 1373
            V TL+SF +GYH+G VN               +   ++L      +A  + VS    G  +G L SG +AD VGRR AL    L  +  A++   AKS+ A   ++LGRL +G   G   A+  +++TE+SP  +RG  GS  Q+   + ++ S   G P     G  W + F  +V PA +    +    ESP +    RG+  +AE+  +KL     V +   AM E + +    E    K  ++  G     + I   +   QQLSGIN   ++S+ +F  AG+       A + +G  N++ + +++ L+D  + GR+ LL+   +GM V+  L + + T   S G     Y ++G +LLFV++FA G G +P   +SE+F    R NA S+ +  +W  N  VGL FL    L++Q        IF  F    + +  K V ETKGKS+++I+
Sbjct:   52 VITLASFQFGYHIGCVNAPGGLITEWIIGSHKDLFDKELSRENADLAWSVAVSVFAVGGMIGGLSSGWLADKVGRRGALFYNNLLALAAAALMGLAKSVGAYPMVILGRLIIGLNCGFSSALVPMFLTEISPNNLRGMLGSLHQLLVTIAILVSQIFGLPHLLGTGDRWPLIFAFTVVPAVLQLALLMLCPESPKYTMAVRGQRNEAESALKKLRDTEDVSTEIEAMQEEATAAGVQEKP--KMGDMFKGALLWPMSIAIMMMLAQQLSGINVAMFYSTVIFRGAGLTGNEPFYATIGMGAVNVIMTLISVWLVDHPKFGRRSLLLAGLTGMFVSTLLLVGALTIQNSGGDKWASYSAIGFVLLFVISFATGPGAIPWFFVSEIFDSSARGNANSIAVMVNWAANLLVGLTFLPINNLMQQYSFF----IFSGFLAFFIFYTWKFVPETKGKSIEQIQ 503

[Close]

BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy Swiss-Prot
Match: GTR3_RAT (Solute carrier family 2, facilitated glucose transporter member 3 OS=Rattus norvegicus GN=Slc2a3 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 1.391e-44
Identity = 135/452 (29.87%), Postives = 221/452 (48.89%), Query Frame = 3

Query:   84 VLVATLSSFLYGYHLGVVNETLESISRDLGFHGNTMAE--------GLVV---STCLG----GAFVGSLFSGLIADGVGRRRALQLCALPMIIGASM---SAAAKSLWAMLLGRLFVGTGMGIGPAVAALYVTEVSPAYVRGTYGSFTQIATGLGLMGSLFIGFP-AKAIEGWWRICFWASVAPAAILALFMEFSVESPHWLFKRGRAADAEAE-FEKLLGGPYVKSAMAEL-SKSDRGDEADTFKFSELLYG-HHRKVVFIGSTLFALQQLSGINAVFYFSSTVFETAGVPSE-SANMCVGIANLLGSFVAMILMDRLGRKVLLIGSFSGMVVAMFLQITSATSLVSRGSGVYLSVGGMLLFVLTFAIGAGPVPSILLSEMFPGRVRANAVSVCMAFHWIVNFFVGLFFLRLLEQIGPLVLNSIFGAFCLLAVLFIKKNVLETKGKSLQEI 1370
            V VAT+ SF +GY+ GV+N   E+I +D  F   T+ E        GL+    S C+     G  +GS   GL  +  GRR ++ L  L  I+G  +   +  A+S+  ++LGRL +G   G+      +Y+ EVSP  +RG +G+  Q+   +G++ +   G       E  W      ++ PA + +  + F  ESP +L    +  D   E  ++L G P V   + E+  +S R  +       EL     + + + I   L   QQ SGINAVFY+S+ +F+ AGV     A +  G+ N + + V++ L++R GR+ L +    GM V       S        +  ++ +  +L++V  F IG GP+P  +++E+F    R  A++V    +W  NF VG+FF      +G  V   IF AF +  ++F    V ETKG++ ++I
Sbjct:   14 VTVATIGSFQFGYNTGVINAP-ETIIKD--FLNYTLEERLEDLPREGLLTTLWSLCVAIFSVGGMIGSFSVGLFVNRFGRRNSMLLVNLIAILGGCLMGFAKIAESVEMLILGRLIIGIFCGLCTGFVPMYIGEVSPTALRGAFGTLNQLGIVVGILVAQVFGLDFILGSEELWPGLLGLTIIPAILQSAALPFCPESPRFLLINRKEEDQATEILQRLWGTPDVIQEIQEMKDESIRMSQEKQVTVLELFKSPSYFQPLLISVVLQLSQQFSGINAVFYYSTGIFQDAGVQEPIYATIGAGVVNTIFTVVSLFLVERAGRRTLHMIGLGGMAVCSVFMTISLLLKDEYEAMSFVCIVAILVYVAFFEIGPGPIPWFIVAELFSQGPRPAAMAVAGCSNWTSNFLVGMFFPSAAAYLGAYVF-IIFAAFLVFFLIFTSFKVPETKGRTFEDI 461

The following BLAST results are available for this feature:

BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy TrEMBL
BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy Swiss-Prot

BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25


Match Name	E-value	Identity	Description
A0A0D2VJH7_GOSRA	0.000e+0	98.04	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2RIC7_GOSRA	0.000e+0	97.82	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2UQH4_GOSRA	0.000e+0	93.25	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A061GIC7_THECC	0.000e+0	84.50	Major facilitator superfamily protein isoform 1 OS...	[more]
A0A061GAC8_THECC	0.000e+0	84.50	Major facilitator superfamily protein isoform 2 OS...	[more]
A0A0D2MK31_GOSRA	0.000e+0	79.69	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2QGG6_GOSRA	0.000e+0	79.27	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2NX69_GOSRA	0.000e+0	79.69	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2RHR3_GOSRA	0.000e+0	79.69	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]
A0A0D2NX78_GOSRA	0.000e+0	79.69	Uncharacterized protein OS=Gossypium raimondii GN=...	[more]

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BLAST of g.arboreum_cottongen_reftransV1_0019635 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25


Match Name	E-value	Identity	Description
XYLE_ECO57	1.551e-48	30.06	D-xylose-proton symporter OS=Escherichia coli O157...	[more]
XYLL2_ARATH	4.115e-48	30.75	D-xylose-proton symporter-like 2 OS=Arabidopsis th...	[more]
ERDL4_ARATH	1.310e-47	31.39	Sugar transporter ERD6-like 4 OS=Arabidopsis thali...	[more]
ERDL6_ARATH	6.020e-47	30.68	Sugar transporter ERD6-like 6 OS=Arabidopsis thali...	[more]
XYLL3_ARATH	2.035e-45	30.41	D-xylose-proton symporter-like 3, chloroplastic OS...	[more]
IOLT_BACSU	2.433e-45	30.65	Major myo-inositol transporter IolT OS=Bacillus su...	[more]
GTR8_BOVIN	2.815e-45	33.25	Solute carrier family 2, facilitated glucose trans...	[more]
GTR3_CANFA	2.825e-45	29.02	Solute carrier family 2, facilitated glucose trans...	[more]
FGT1_CAEEL	4.964e-45	31.00	Facilitated glucose transporter protein 1 OS=Caeno...	[more]
GTR3_RAT	1.391e-44	29.87	Solute carrier family 2, facilitated glucose trans...	[more]

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InterPro

Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003663	Sugar/inositol transporter	PRINTS	PR00171	SUGRTRNSPORT	coord: 354..375 score: 28.3 coord: 113..132 score: 28.42 coord: 28..38 score: 39.92 coord: 377..389 score: 38.4 coord: 268..278 score: 65.38
IPR003663	Sugar/inositol transporter	TIGRFAM	TIGR00879	TIGR00879	coord: 21..449 e-value: 6.2E-85 score: 283.6
IPR005828	Major facilitator, sugar transporter-like	PFAM	PF00083	Sugar_tr	coord: 21..451 e-value: 5.0E-91 score: 305.7
None	No IPR available	GENE3D	1.20.1250.20		coord: 255..437 e-value: 1.1E-16 score: 60.2 coord: 19..203 e-value: 6.6E-22 score: 77.2
None	No IPR available	PANTHER	PTHR23503	FAMILY NOT NAMED	coord: 3..453
None	No IPR available	PANTHER	PTHR23503:SF19	PLASTIDIC GLUCOSE TRANSPORTER 3-RELATED	coord: 3..453
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 91..111
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 40..58
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 59..79
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 135..145
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 146..168
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 257..281
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 314..319
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..39
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 282..292
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 320..338
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 117..134
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 388..408
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 350..376
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 80..90
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 414..434
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 198..256
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 339..349
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 112..116
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 435..457
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 169..173
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 293..313
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 377..387
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 174..197
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 409..413
None	No IPR available	TMHMM	TMhelix		coord: 144..166
None	No IPR available	TMHMM	TMhelix		coord: 389..411
None	No IPR available	TMHMM	TMhelix		coord: 354..376
None	No IPR available	TMHMM	TMhelix		coord: 112..134
None	No IPR available	TMHMM	TMhelix		coord: 21..38
None	No IPR available	TMHMM	TMhelix		coord: 173..195
None	No IPR available	TMHMM	TMhelix		coord: 415..434
None	No IPR available	TMHMM	TMhelix		coord: 58..80
None	No IPR available	TMHMM	TMhelix		coord: 320..339
None	No IPR available	TMHMM	TMhelix		coord: 257..279
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 76..93
IPR005829	Sugar transporter, conserved site	PROSITE	PS00216	SUGAR_TRANSPORT_1	coord: 309..325
IPR020846	Major facilitator superfamily domain	PROSITE	PS50850	MFS	coord: 20..442 score: 43.152
IPR020846	Major facilitator superfamily domain	SUPERFAMILY	103473	MFS general substrate transporter	coord: 12..450

Sequences

The following sequences are available for this feature:

contig sequence

contig sequence

>g.arboreum_cottongen_reftransV1_0019635 ID=g.arboreum_cottongen_reftransV1_0019635; Name=g.arboreum_cottongen_reftransV1_0019635; organism=Gossypium arboreum; type=contig; length=1706bp
TTTTTATGGGCTTTTGAGAACGTTTGCTGAATGGAATGGGCAAGGATGTT
GGAGTCCCTTCTTGGAAGCATTCACTCCGGCATGTACTCGTGGCAACATT
ATCTTCCTTCCTCTATGGTTATCATCTTGGAGTAGTTAATGAAACACTAG
AAAGTATTTCACGTGACCTTGGTTTTCATGGGAATACCATGGCTGAAGGT
CTGGTTGTAAGTACATGTTTAGGGGGTGCCTTTGTTGGATCGCTGTTCAG
TGGTTTGATTGCAGACGGAGTTGGGCGTCGCAGGGCACTCCAGCTATGTG
CTTTGCCTATGATAATTGGGGCTTCAATGAGTGCAGCAGCAAAAAGCCTT
TGGGCCATGCTTCTGGGGAGGTTATTTGTGGGGACTGGAATGGGTATTGG
CCCAGCTGTGGCAGCTCTTTATGTGACAGAGGTTTCTCCAGCTTATGTAA
GAGGTACATATGGAAGCTTCACTCAAATTGCAACAGGCCTAGGATTGATG
GGCTCTCTATTTATTGGATTCCCTGCTAAGGCAATCGAGGGTTGGTGGCG
CATATGTTTCTGGGCATCTGTTGCTCCTGCTGCTATACTTGCTCTTTTTA
TGGAGTTTTCTGTAGAGAGTCCCCATTGGCTTTTTAAGAGAGGAAGAGCT
GCTGATGCTGAAGCTGAGTTTGAAAAACTTTTGGGAGGACCATATGTCAA
AAGTGCAATGGCTGAATTGTCAAAGTCAGACAGAGGGGATGAGGCAGATA
CATTCAAGTTCTCAGAGCTACTTTATGGCCATCATCGTAAAGTTGTTTTC
ATTGGGTCTACCCTTTTTGCTTTACAACAGCTCTCTGGTATAAATGCTGT
TTTCTATTTCTCGTCAACTGTCTTTGAAACTGCTGGCGTACCTTCAGAGT
CTGCAAACATGTGTGTGGGAATTGCCAATTTGTTAGGATCATTTGTTGCA
ATGATTTTGATGGATAGACTGGGAAGGAAGGTACTTCTCATTGGAAGCTT
TTCAGGCATGGTAGTGGCAATGTTTCTTCAGATAACTTCAGCTACTTCCT
TAGTCTCAAGAGGCAGTGGAGTTTATCTCTCTGTTGGAGGCATGCTTTTG
TTTGTCTTGACCTTCGCTATTGGAGCTGGACCAGTCCCTAGTATCCTACT
ATCAGAAATGTTTCCTGGTCGGGTTAGGGCAAATGCAGTGTCAGTTTGCA
TGGCTTTCCATTGGATTGTAAATTTCTTTGTCGGGCTGTTCTTTTTGCGG
TTACTGGAACAGATTGGACCATTAGTCCTGAATTCAATTTTCGGTGCCTT
TTGTCTGCTGGCAGTACTTTTTATAAAGAAAAATGTGTTGGAAACAAAAG
GAAAATCACTTCAAGAGATTGAAATTGCACTTCTTCCATCAGAATAGAGG
GCGCTTCGGGATATAAGTATTTCATTGCACCAATATCTTCTGCCGCTAAT
CCTGCCGGCTTATCAATCTGAAAGATGCAGACCTTGGTAAATGATGTCAT
AGATGGATCATAGCGAAAAGAACACATTCATCAGGTGCTCACTCTCCTAG
CCCATGTAACTCTAAGAGAAATTATTTTATTGTTTCCTTGAATACTGAAT
TACTACATTTCCTGGCGGAGAAATTAATATAGCATATACGGGGATTCACT
TTGGATGATATGTTTTTAACTTCTAATCAGGATGGAACGTCACATTTTGA
GTTGAG

Annotated Terms

The following terms have been associated with this contig:

Vocabulary: **INTERPRO**
Term	Definition
IPR003663	Sugar/inositol_transpt
IPR005828	MFS_sugar_transport-like
IPR005829	Sugar_transporter_CS
IPR020846	MFS_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0022891	substrate-specific transmembrane transporter activity
GO:0022857	transmembrane transporter activity
GO:0005215	transporter activity

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Cellular Component**
Term	Definition
GO:0016020	membrane
GO:0016021	integral to membrane

Search form

g.arboreum_cottongen_reftransV1_0019635, g.arboreum_cottongen_reftransV1_0019635 (contig) Gossypium arboreum

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