g.arboreum_cottongen_reftransV1_0014585, g.arboreum_cottongen_reftransV1_0014585 (contig) Gossypium arboreum

Overview
Nameg.arboreum_cottongen_reftransV1_0014585
Unique Nameg.arboreum_cottongen_reftransV1_0014585
Typecontig
OrganismGossypium arboreum (Tree cotton)
Sequence length873
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Chr1chromosomeg.arboreum_cottongen_reftransV1_0014585:1..873 .
Chr1:64976587..64980402 +
n/a
Homology
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A0A0LWI2_CUCSA (Uncharacterized protein OS=Cucumis sativus GN=Csa_1G050050 PE=4 SV=1)

HSP 1 Score: 494.197 bits (1271), Expect = 2.120e-159
Identity = 240/286 (83.92%), Postives = 262/286 (91.61%), Query Frame = 2
Query:    2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLAL 859
            GFCPRK RPVQK VWQSGEYYTFQ+FEAKAK+FE++YLKK +KKG LS LE+ETL+W+AT+DKP  VEYANDMPGSAFVP++ K      REAGEG T+GET WNMR VSRAKGSLL+FMKEEIPGVTSPMVY+AM+FSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVR+ GYGGE NPLVTF+ LGEKTTVMSPEV + AG+PCCRLVQNAGEFVVTFPRAYH+GFSHGFN GEAANIATPEWL VA+DAAIRRASINYPPMVSH+QLLYDLAL
Sbjct:   98 GFCPRKTRPVQKSVWQSGEYYTFQQFEAKAKNFEKSYLKKCTKKGGLSPLEIETLYWRATLDKPFSVEYANDMPGSAFVPVSAK----MFREAGEGTTLGETAWNMRGVSRAKGSLLKFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVQGYGGEINPLVTFAVLGEKTTVMSPEVLVSAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLNVAKDAAIRRASINYPPMVSHYQLLYDLAL 379          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: D7LRW5_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_485204 PE=4 SV=1)

HSP 1 Score: 488.804 bits (1257), Expect = 1.231e-158
Identity = 237/290 (81.72%), Postives = 260/290 (89.66%), Query Frame = 2
Query:    2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871
            GFCPRK RPVQ+PVWQSGE Y+F EFE KAK+FE+NYLKK  KK  LSALE+ETL+W+ATVDKP  VEYANDMPGSAF+PL+   ++      GEG TVGET WNMRA+SRA+GSLL+FMKEEIPGVTSPMVYIAM+FSWFAWHVEDHDLHSLNYLHMGAGKTWYGVP+DAAVAFEEVVR+ GYGGE NPLVTFSTLGEKTTVMSPEVF+ AGIPCCRLVQN G+FVVTFP AYHSGFSHGFNFGEA+NIATPEWLR+A+DAAIRRA+INYPPMVSH QLLYD AL L S
Sbjct:  104 GFCPRKQRPVQRPVWQSGEEYSFGEFEFKAKNFEKNYLKKCGKKSQLSALEIETLYWRATVDKPFSVEYANDMPGSAFIPLSLA-AARRRESGGEGGTVGETAWNMRAMSRAEGSLLKFMKEEIPGVTSPMVYIAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPKDAAVAFEEVVRVHGYGGELNPLVTFSTLGEKTTVMSPEVFVKAGIPCCRLVQNPGDFVVTFPGAYHSGFSHGFNFGEASNIATPEWLRMAKDAAIRRAAINYPPMVSHLQLLYDFALALGS 392          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: V4LPK0_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10010066mg PE=4 SV=1)

HSP 1 Score: 486.878 bits (1252), Expect = 1.051e-157
Identity = 233/290 (80.34%), Postives = 261/290 (90.00%), Query Frame = 2
Query:    2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871
            GFCPRK RPVQ+PVWQSGE+Y+F EFE KAK+FE+NYL+K  K+  LSALE+ETL+W+ATVDKP  VEYANDMPGSAF+PL+   ++      G+G TVGET WNMRA++RA+GSLL+FMKEEIPGVTSPMVYIAM+FSWFAWHVEDHDLHSLNYLHMGAGKTWYGVP+DAAVAFEEVVR+ GYGGE NPLVTFSTLGEKTTVMSPEVF+ AGIPCCRLVQN GEFVVTFP AYHSGFSHGFNFGEA+NIATP+WLR+A+DAAIRRA+INYPPMVSH QLLYD AL L S
Sbjct:  105 GFCPRKQRPVQRPVWQSGEHYSFGEFEFKAKNFEKNYLRKCGKRSQLSALEIETLYWRATVDKPFSVEYANDMPGSAFIPLSLA-AARRRESGGDGGTVGETAWNMRAMARAEGSLLKFMKEEIPGVTSPMVYIAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPKDAAVAFEEVVRVHGYGGELNPLVTFSTLGEKTTVMSPEVFVRAGIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPQWLRMAKDAAIRRAAINYPPMVSHLQLLYDFALALGS 393          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A072V0U6_MEDTR (Lysine-specific demethylase REF6-like protein, putative OS=Medicago truncatula GN=MTR_3g075210 PE=4 SV=1)

HSP 1 Score: 486.108 bits (1250), Expect = 3.640e-156
Identity = 231/290 (79.66%), Postives = 250/290 (86.21%), Query Frame = 2
Query:    2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871
            GFCPRKPRPV++PVWQSG++YTF EFEAKAK FER+Y+ K  KK + SALE+ETLFWKATVDKP  VEYANDMPGSAF       +          ++V  + WNMR VSRAKGSLLRFMKEEIPGVTSPMVY+AMLFSWFAWHVEDHDLHSLNYLHMGA KTWYGVPRDAAVAFE+VVR+ GYGGE NPLVTFS LGEKTTVMSPEVF+ AG+PCCRLVQNAGEFVVTFPRAYH+GFSHGFN  EAANIATPEWLRVA+DAAIRRASINY PMVSH QLLYDLAL LCS
Sbjct:   83 GFCPRKPRPVKRPVWQSGDHYTFSEFEAKAKWFERSYMNK-KKKNSNSALEIETLFWKATVDKPFSVEYANDMPGSAF-------ADTVENNNKPFSSVANSTWNMRRVSRAKGSLLRFMKEEIPGVTSPMVYLAMLFSWFAWHVEDHDLHSLNYLHMGASKTWYGVPRDAAVAFEDVVRVHGYGGEINPLVTFSILGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHTGFSHGFNCAEAANIATPEWLRVAKDAAIRRASINYSPMVSHLQLLYDLALALCS 364          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: V4TIR4_9ROSI (Uncharacterized protein OS=Citrus clementina GN=CICLE_v10018473mg PE=4 SV=1)

HSP 1 Score: 486.493 bits (1251), Expect = 7.235e-156
Identity = 230/291 (79.04%), Postives = 252/291 (86.60%), Query Frame = 2
Query:    2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKY-SKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871
            GFCPRKPRPVQKPVWQSGEYYTFQEFE KAK+FE++YLKK  +KK  LSALE+E+L+WKA+VDKP  VEYANDMPGSAFVP+   + + G             PWNMR VSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWH EDHDLHSLNYLHMGA KTWYGVP +AA AFEEVVR+ GYG E NPLVTF+TLGEKTT++SPEVF+ AG+PCCRLVQNAGEFVVTFPRAYH GFSHGFN GEAANIATPEWL +A+DAAIRRASINYPPMVSHFQLLYDLA+ + S
Sbjct:   98 GFCPRKPRPVQKPVWQSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDKPFSVEYANDMPGSAFVPVRKIREAVGEGVTVGET-----PWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHS 383          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5D_CANFA (Lysine-specific demethylase 5D OS=Canis familiaris GN=KDM5D PE=2 SV=1)

HSP 1 Score: 157.532 bits (397), Expect = 6.139e-41
Identity = 99/274 (36.13%), Postives = 140/274 (51.09%), Query Frame = 2
Query:   47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALE-VETLFWK--ATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVV-RLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLA 856
            Q+ + YT Q F   A SF+ +Y   +S    +   E VE  FW+  +++++   VEY  D+    F    P  SS       E        WN+  +     S+L  +  +I G+  P +Y+ M+FS F WH+EDH  +S+NYLH G  KTWYGVP  AA   EEV+ RL     +  P      L +  T+M+P   +  G+P  R  Q AGEFV+TFPRAYHSGF+ G+NF EA N  T +WL   R        +    + SH +L+  +A
Sbjct:  380 QATQEYTLQSFGEMADSFKADY---FSMPVHMVPTELVEKEFWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSSSQRILSPEEEEYATSG-WNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEQLEEVMKRLTPELFDSQP----DLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA 645          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: JM703_ORYSJ (Lysine-specific demethylase JMJ703 OS=Oryza sativa subsp. japonica GN=JMJ703 PE=1 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 9.070e-41
Identity = 103/283 (36.40%), Postives = 144/283 (50.88%), Query Frame = 2
Query:   44 WQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALE-VETLFWKATVDKPAM---VEYANDMP----GSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVR--LDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALE 862
            ++ G  +T Q F+  A  F + Y +K +   ++ ++E +E  +W+  V+ P     V Y  D+     GS F  L+P+  S    +  +        WN+  + R +GS+L F   +I GV  P VY+ M FS F WHVEDH L+SLNY+H GA K WYGVP   AV  E  +R  L     E   L     L    T  SP +    G+   R VQ+ GEFV+TFPRAYH+GF+ GFN  EA N+A  +WL +  +A            +SH +LL   A E
Sbjct:  264 FEPGPEFTLQTFQKYADDFSKQYFRKDTSMDSVPSVEDIEGEYWR-IVEVPTEEIEVIYGADLETGTFGSGFPKLSPETKSDAEDKYAQSG------WNLNNLPRLQGSVLSFEGGDISGVLVPWVYVGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVPGKDAVNLESAMRKHLPELFEEQPDL-----LHNLVTQFSPSLLKSEGVHVYRCVQHEGEFVLTFPRAYHAGFNCGFNCAEAVNVAPIDWLPIGHNAVELYREQARKITISHDKLLLGAARE 534          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5D_PANTR (Lysine-specific demethylase 5D OS=Pan troglodytes GN=KDM5D PE=2 SV=1)

HSP 1 Score: 156.762 bits (395), Expect = 1.132e-40
Identity = 98/279 (35.13%), Postives = 143/279 (51.25%), Query Frame = 2
Query:   47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMP----GSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST---LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLA 856
            Q+ + YT Q F   A SF+ +Y            LE E  FW+  +++++   VEY  D+     GS F   N K++      + E      + WN+  +     S+L  +  +I G+  P +Y+ M+FS F WH+EDH  +S+NYLH G  KTWYGVP  AA   EEV+++        P +  S    L +  T+M+P   +  G+P  R  Q AGEFV+TFPRAYHSGF+ G+NF EA N  T +WL   R        +    + SH +L+  +A
Sbjct:  377 QATQEYTLQSFGEMADSFKSDYFNMPVHMVPTELLEKE--FWRLVSSIEEDVTVEYGADIHYKEFGSGFPVSNSKQN-----LSPEEKEYATSGWNLNVMPVLAQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKM------LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA 642          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5D_MOUSE (Lysine-specific demethylase 5D OS=Mus musculus GN=Kdm5d PE=2 SV=2)

HSP 1 Score: 155.606 bits (392), Expect = 2.346e-40
Identity = 98/276 (35.51%), Postives = 140/276 (50.72%), Query Frame = 2
Query:   47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMPGSAF---VPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVV-RLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLA 856
            Q+ + YT Q F   A SF+ +Y            +E E  FW+  +++++   VEY  D+    F    P+N  K      E    A      WN+  +     S+L  +  +I G+  P +Y+ M+FS F WH+EDH  +S+NYLH G  KTWYGVP  AA   E+V+ RL     +  P      L +  T+M+P   +  G+P  R  Q AGEFV+TFPRAYHSGF+ G+NF EA N  T +WL V R        +    + SH +L+  +A
Sbjct:  386 QATQEYTLQSFGEMADSFKADYFNMPVHMVPTEVVEKE--FWRLVSSIEEDVTVEYGADIHSKEFGSGFPVNNSKWDLSPEEKEYAACG----WNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEDVMKRLTPELFDSQP----DLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPVGRQCIEHYRRLRRYCVFSHEELICKMA 651          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: JMJ14_ARATH (Probable lysine-specific demethylase JMJ14 OS=Arabidopsis thaliana GN=JMJ14 PE=1 SV=1)

HSP 1 Score: 154.066 bits (388), Expect = 4.338e-40
Identity = 98/286 (34.27%), Postives = 145/286 (50.70%), Query Frame = 2
Query:   44 WQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSA---------LEVETLFWKATVDKPAMVE--YANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVV--RLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALE 862
            +Q+G  +T +EF+   + F+  Y +     G+ ++          ++E  +W+        VE  Y  D+    F    PK   G      +  +     WN+  +SR  GS+L F   +I GV  P +Y+ M FS F WHVEDH L+S+NYLH G  K WYG+P + A +FE V+  RL     E   L     L +  T +SP +    G+P  R VQ +GEF++TFP+AYHSGF+ GFN  EA N+A  +WL   ++A    +       +SH +LL   A+E
Sbjct:  171 FQTGPDFTLEEFQKYDEYFKECYFQSEDHPGSKASENKKFKPKVKDLEGEYWRIVEQATDEVEVYYGADLETKKFGSGFPKYKPGYPISEADQYSQCG--WNLNNLSRLPGSVLAFESCDISGVIVPWLYVGMCFSTFCWHVEDHHLYSMNYLHTGDPKVWYGIPGNHAESFENVMKKRLPDLFEEQPDL-----LHQLVTQLSPRILKEEGVPVYRAVQRSGEFILTFPKAYHSGFNCGFNCAEAVNVAPVDWLVHGQNAVEGYSKQRRKSSLSHDKLLLGAAME 449          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5D_HUMAN (Lysine-specific demethylase 5D OS=Homo sapiens GN=KDM5D PE=1 SV=2)

HSP 1 Score: 154.066 bits (388), Expect = 8.014e-40
Identity = 96/279 (34.41%), Postives = 143/279 (51.25%), Query Frame = 2
Query:   47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMP----GSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST---LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLA 856
            Q+ + Y+ Q F   A SF+ +Y            +E E  FW+  +++++   VEY  D+     GS F   N K++      + E      + WN+  +     S+L  +  +I G+  P +Y+ M+FS F WH+EDH  +S+NYLH G  KTWYGVP  AA   EEV+++        P +  S    L +  T+M+P   +  G+P  R  Q AGEFV+TFPRAYHSGF+ G+NF EA N  T +WL   R        +    + SH +L+  +A
Sbjct:  377 QATQEYSLQSFGEMADSFKSDYFNMPVHMVPTELVEKE--FWRLVSSIEEDVTVEYGADIHSKEFGSGFPVSNSKQN-----LSPEEKEYATSGWNLNVMPVLDQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMKM------LTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA 642          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: JMJ18_ARATH (Lysine-specific demethylase JMJ18 OS=Arabidopsis thaliana GN=JMJ18 PE=2 SV=1)

HSP 1 Score: 152.525 bits (384), Expect = 8.644e-40
Identity = 104/296 (35.14%), Postives = 145/296 (48.99%), Query Frame = 2
Query:   20 PRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTL-----SALEVETLFWKATVDKPA---MVEYANDMP----GSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRL---DGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALE 862
            P   +K  + SG  +T  EFE  A  F+ +Y +K    G +     S  ++E  +W+  V++P     V Y  D+     GS F     K +     +           WN+  + R  GS+L F   +I GV  P +Y+ M FS F WHVEDH L+SLNY H G  K WYGVP   A A E+ +R    D +  E  P      L    T  SP +    G+   R+VQN+GE+V+TFPRAYH+GF+ GFN  EA N+A  +WL   ++A    +       +SH +LL   A E
Sbjct:  165 PEAEEKFGFNSGSDFTLDEFEKYALHFKDSYFEKKDSGGDIVKWTPSVDDIEGEYWR-IVEQPTDEVEVYYGADLENGVLGSGFYKRAEKFTGSDMEQYTLSG------WNLNNLPRLPGSVLSFEDCDISGVLVPWLYVGMCFSSFCWHVEDHHLYSLNYHHFGEPKVWYGVPGSNATALEKAMRKHLPDLF--EEQP----DLLHGLVTQFSPSILKDEGVQAYRVVQNSGEYVLTFPRAYHAGFNCGFNCAEAVNVAPVDWLAHGQNAVELYSKETRKTSLSHDKLLLGAAYE 447          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5C_MOUSE (Lysine-specific demethylase 5C OS=Mus musculus GN=Kdm5c PE=2 SV=4)

HSP 1 Score: 151.754 bits (382), Expect = 5.330e-39
Identity = 95/275 (34.55%), Postives = 136/275 (49.45%), Query Frame = 2
Query:   47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKA--TVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST---LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLA 856
            Q+   YT Q F   A SF+ +Y            +E E  FW+   ++++   VEY  D+    F    P   S       E        WN+  +   + S+L  +  +I G+  P +Y+ M+FS F WH+EDH  +S+NYLH G  KTWYGVP  AA   EEV++      +  P +  S    L +  T+M+P   +  G+P  R  Q AGEFV+TFPRAYHSGF+ G+NF EA N  T +WL   R        +    + SH +L+  +A
Sbjct:  387 QATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKE--FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSG-WNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA 652          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5C_HUMAN (Lysine-specific demethylase 5C OS=Homo sapiens GN=KDM5C PE=1 SV=2)

HSP 1 Score: 151.369 bits (381), Expect = 6.776e-39
Identity = 95/275 (34.55%), Postives = 136/275 (49.45%), Query Frame = 2
Query:   47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST---LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLA 856
            Q+   YT Q F   A SF+ +Y            +E E  FW+   ++++   VEY  D+    F    P   S       E        WN+  +   + S+L  +  +I G+  P +Y+ M+FS F WH+EDH  +S+NYLH G  KTWYGVP  AA   EEV++      +  P +  S    L +  T+M+P   +  G+P  R  Q AGEFV+TFPRAYHSGF+ G+NF EA N  T +WL   R        +    + SH +L+  +A
Sbjct:  387 QATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKE--FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSG-WNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA 652          
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5C_CANFA (Lysine-specific demethylase 5C OS=Canis familiaris GN=KDM5C PE=2 SV=1)

HSP 1 Score: 150.984 bits (380), Expect = 9.421e-39
Identity = 95/275 (34.55%), Postives = 137/275 (49.82%), Query Frame = 2
Query:   47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST---LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLA 856
            Q+   YT Q F   A SF+ +Y            +E E  FW+   ++++   VEY  D+    F    P  S        E      + WN+  +   + S+L  +  +I G+  P +Y+ M+FS F WH+EDH  +S+NYLH G  KTWYGVP  AA   EEV++      +  P +  S    L +  T+M+P   +  G+P  R  Q AGEFV+TFPRAYHSGF+ G+NF EA N  T +WL   R        +    + SH +L+  +A
Sbjct:  387 QATREYTLQSFGEMADSFKADYFNMPVHMVPTELVEKE--FWRLVNSIEEDVTVEYGADIHSKEFGSGFPV-SDNKRHLTPEEEEYATSGWNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA 652          
The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0A0LWI2_CUCSA2.120e-15983.92Uncharacterized protein OS=Cucumis sativus GN=Csa_... [more]
D7LRW5_ARALL1.231e-15881.72Putative uncharacterized protein OS=Arabidopsis ly... [more]
V4LPK0_EUTSA1.051e-15780.34Uncharacterized protein OS=Eutrema salsugineum GN=... [more]
A0A072V0U6_MEDTR3.640e-15679.66Lysine-specific demethylase REF6-like protein, put... [more]
V4TIR4_9ROSI7.235e-15679.04Uncharacterized protein OS=Citrus clementina GN=CI... [more]

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BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt)
Total hits: 25
Match NameE-valueIdentityDescription
KDM5D_CANFA6.139e-4136.13Lysine-specific demethylase 5D OS=Canis familiaris... [more]
JM703_ORYSJ9.070e-4136.40Lysine-specific demethylase JMJ703 OS=Oryza sativa... [more]
KDM5D_PANTR1.132e-4035.13Lysine-specific demethylase 5D OS=Pan troglodytes ... [more]
KDM5D_MOUSE2.346e-4035.51Lysine-specific demethylase 5D OS=Mus musculus GN=... [more]
JMJ14_ARATH4.338e-4034.27Probable lysine-specific demethylase JMJ14 OS=Arab... [more]
KDM5D_HUMAN8.014e-4034.41Lysine-specific demethylase 5D OS=Homo sapiens GN=... [more]
JMJ18_ARATH8.644e-4035.14Lysine-specific demethylase JMJ18 OS=Arabidopsis t... [more]
KDM5C_MOUSE5.330e-3934.55Lysine-specific demethylase 5C OS=Mus musculus GN=... [more]
KDM5C_HUMAN6.776e-3934.55Lysine-specific demethylase 5C OS=Homo sapiens GN=... [more]
KDM5C_CANFA9.421e-3934.55Lysine-specific demethylase 5C OS=Canis familiaris... [more]

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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003347JmjC domainSMARTSM00558cupin_9coord: 61..230
e-value: 8.1E-48
score: 174.9
IPR003347JmjC domainPFAMPF02373JmjCcoord: 94..213
e-value: 2.9E-36
score: 124.3
IPR003347JmjC domainPROSITEPS51184JMJCcoord: 61..230
score: 33.284
NoneNo IPR availablePANTHERPTHR10694:SF38LYSINE-SPECIFIC DEMETHYLASE REF6coord: 1..253
NoneNo IPR availablePANTHERPTHR10694JUMONJI DOMAIN CONTAINING PROTEINcoord: 1..253
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..86
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 107..253
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 87..106
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 75..246

Sequences
The following sequences are available for this feature:

contig sequence

>g.arboreum_cottongen_reftransV1_0014585 ID=g.arboreum_cottongen_reftransV1_0014585; Name=g.arboreum_cottongen_reftransV1_0014585; organism=Gossypium arboreum; type=contig; length=873bp
CGGGTTTTGCCCCAGAAAGCCCCGACCTGTTCAGAAACCGGTATGGCAAA
GTGGGGAGTACTATACTTTCCAAGAATTCGAAGCTAAAGCCAAAAGTTTC
GAAAGGAATTACTTGAAAAAATACAGCAAGAAGGGTACCCTTTCAGCTTT
AGAAGTTGAAACCCTTTTTTGGAAAGCAACGGTTGATAAACCTGCCATGG
TTGAGTATGCTAATGACATGCCTGGTTCAGCTTTTGTGCCATTGAACCCA
AAGAAGAGTAGTGGAGGAGGGAGGGAAGCAGGGGAAGGGGCTACAGTAGG
AGAAACACCTTGGAATATGAGAGCTGTTTCGAGGGCTAAAGGGTCATTGT
TAAGGTTCATGAAGGAGGAGATTCCGGGGGTTACTTCCCCTATGGTGTAC
ATTGCAATGTTGTTCAGTTGGTTCGCTTGGCATGTTGAGGATCATGACTT
GCATAGCTTGAATTATTTGCATATGGGTGCAGGGAAGACTTGGTATGGTG
TGCCGAGGGACGCTGCGGTTGCTTTTGAGGAGGTCGTCAGGCTTGATGGC
TATGGAGGAGAGTTCAATCCTCTTGTTACCTTTTCTACACTCGGTGAGAA
GACCACAGTGATGTCTCCTGAAGTATTTCTTCATGCCGGTATACCATGCT
GCAGGTTAGTGCAAAATGCTGGGGAATTTGTTGTCACTTTCCCGAGAGCT
TATCATTCAGGGTTCAGTCATGGTTTTAACTTTGGCGAGGCGGCTAATAT
TGCAACTCCGGAATGGTTGAGAGTGGCCAGAGATGCTGCTATTCGAAGAG
CTTCAATCAATTACCCTCCGATGGTCTCTCATTTCCAGTTACTTTACGAT
CTTGCACTTGAATTATGTTCAAG
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Annotated Terms
The following terms have been associated with this contig:
Vocabulary: INTERPRO
TermDefinition
IPR003347JmjC_dom