g.arboreum_cottongen_reftransV1_0014585, g.arboreum_cottongen_reftransV1_0014585 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A067D210_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g039624mg PE=4 SV=1) HSP 1 Score: 479.945 bits (1234), Expect = 2.349e-165 Identity = 230/291 (79.04%), Postives = 252/291 (86.60%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKY-SKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGEYYTFQEFE KAK+FE++YLKK +KK LSALE+E+L+WKA+VDKP VEYANDMPGSAFVP+ + + G PWNMR VSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWH EDHDLHSLNYLHMGA KTWYGVP +AA AFEEVVR+ GYG E NPLVTF+TLGEKTT++SPEVF+ AG+PCCRLVQNAGEFVVTFPRAYH GFSHGFN GEAANIATPEWL +A+DAAIRRASINYPPMVSHFQLLYDLA+ + S Sbjct: 98 GFCPRKPRPVQKPVWQSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDKPFSVEYANDMPGSAFVPVRKIREAVGEGVTVGET-----PWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHS 383
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A087G846_ARAAL (Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AA8G196500 PE=4 SV=1) HSP 1 Score: 479.559 bits (1233), Expect = 5.470e-165 Identity = 229/290 (78.97%), Postives = 260/290 (89.66%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPVQ+PVWQSGE+Y+F EFE KAK+FE+NYLKK SKK LSALE+ETL+WKATVDKP VEYANDMPGSAF+PL+ ++ G+ TVGE+PWNMRA++RA+GSLL+FMKEEIPGVTSPMVY+AM+FSWFAWHVEDHDLHSLNYLHMGA KTWYGVP+DAAVAFEEVVR+ GYGGE NPLVT STLGEKTTVMSPEVF+ AGIPCCRLVQN G+FV+TFP+AYHSGFSHGFN GEA+NIATPEWLR+A+DAAIRRA+++YPPMVSH QLLYD AL L S Sbjct: 104 GFCPRKQRPVQRPVWQSGEHYSFGEFEYKAKTFEKNYLKKCSKKSQLSALEMETLYWKATVDKPFSVEYANDMPGSAFIPLS-LAAARRRESGGDVGTVGESPWNMRAMARAEGSLLKFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHMGASKTWYGVPKDAAVAFEEVVRVHGYGGELNPLVTISTLGEKTTVMSPEVFVKAGIPCCRLVQNPGDFVITFPKAYHSGFSHGFNCGEASNIATPEWLRMAKDAAIRRAAVSYPPMVSHLQLLYDFALALGS 392
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: B9I3K5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s09390g PE=4 SV=2) HSP 1 Score: 508.449 bits (1308), Expect = 8.313e-164 Identity = 246/290 (84.83%), Postives = 263/290 (90.69%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGE YTFQEFE KAKSFE+NYLKK+SKKG LS LE+E L+WKAT+DKP VEYANDMPGSAF +P+K G G GEG VGET WNMR+VSRAKGSLLRFMKEEIPGVTSPMVYI M+FSWFAWHVEDHDLHSLNY+HMGAGKTWYGVPR+AAVAFEEVVR+ GYGGE NPLVTF+ LGEKTTVMSPEVF+ AG+PCCRLVQNAGEFVVTFPRAYHSGFSHGFN GEAANIATPEWL VA+DAAIRRASINYPPMVSHFQLLYDLALE C+ Sbjct: 102 GFCPRKPRPVQKPVWQSGETYTFQEFETKAKSFEKNYLKKFSKKGGLSPLEIENLYWKATLDKPFAVEYANDMPGSAF---SPRKKEGQGGVVGEGMYVGETEWNMRSVSRAKGSLLRFMKEEIPGVTSPMVYIGMIFSWFAWHVEDHDLHSLNYMHMGAGKTWYGVPREAAVAFEEVVRVHGYGGENNPLVTFAVLGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLTVAKDAAIRRASINYPPMVSHFQLLYDLALEFCT 388
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: B9IF38_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s10040g PE=4 SV=2) HSP 1 Score: 506.523 bits (1303), Expect = 2.367e-163 Identity = 243/290 (83.79%), Postives = 264/290 (91.03%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGE YTFQEFE KA++FE+NYLKK+ KKG LS LE+ETL+WKAT+DKP VEYANDMPGSAF +P+K G G AGEG +VG+T WNMR VSRAKGSLLRFMKEEIPGVTSPMVY+ M+FSWFAWHVEDHDLHSLNY+HMGAGKTWYGVPR+AAVAFEEVVR+ GYGGE NPLVTF+ LGEKTTVMSPEVF+ AG+PCCRLVQNAGEFVVTFPRAYHSGFSHGFN GEAANIATPEWL VA+DAAIRRASINYPPMVSHFQLLYDLALE C+ Sbjct: 102 GFCPRKPRPVQKPVWQSGETYTFQEFETKARTFEKNYLKKFFKKGALSPLEIETLYWKATLDKPFSVEYANDMPGSAF---SPRKKEGQGGVAGEGMSVGDTEWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYVGMMFSWFAWHVEDHDLHSLNYMHMGAGKTWYGVPREAAVAFEEVVRVHGYGGEINPLVTFAVLGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLMVAKDAAIRRASINYPPMVSHFQLLYDLALEFCT 388
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A067KFE5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11361 PE=4 SV=1) HSP 1 Score: 509.99 bits (1312), Expect = 6.850e-163 Identity = 244/290 (84.14%), Postives = 258/290 (88.97%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGE YTFQEFE KAKSFE++YLKK SKKG LS LE+ETL+WKATVDKP VEYANDMPGSAF + KK+ G G E WNMR VSR+KGSLLRFMKEEIPGVTSPMVY+AMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPR+AAVAFEEVVR+ GYGGE NPLVTF LGEKTTVMSPEVF+ AG+PCCRLVQNAGEFVVTFPRAYHSGFSHGFN GEAANIATPEWLRVA+DAAIRRASINYPPMVSHFQLLYDLALELC+ Sbjct: 103 GFCPRKPRPVQKPVWQSGENYTFQEFETKAKSFEKSYLKKGSKKGALSPLEIETLYWKATVDKPFSVEYANDMPGSAF---SHKKTGGKELGEGVTVGETE--WNMRGVSRSKGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPREAAVAFEEVVRVHGYGGETNPLVTFQVLGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALELCT 387 HSP 2 Score: 64.3142 bits (155), Expect = 3.420e-8 Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 2 Query: 785 AAIRRASINYPPMVSHFQLLYDLALELCS 871 AAIRRASINYPPMVSHFQLLYDLALELC+ Sbjct: 620 AAIRRASINYPPMVSHFQLLYDLALELCT 648
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: B9RAP0_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1507500 PE=4 SV=1) HSP 1 Score: 501.13 bits (1289), Expect = 8.986e-161 Identity = 247/290 (85.17%), Postives = 260/290 (89.66%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGE YTFQEFEAKAKSFE++Y KK KK S LEVETL+WKATVDKP VEYANDMPGSAF K GG+E EG TVGET WNMR VSRAKGSLLRFMKEEIPGVTSPMVY+AM+FSWFAWHVEDHDLHSLNYLH+GAGKTWYGVP++AAVAFEEVVR GYGGE NPLVTFS LGEKTTVMSPEVF+ AG+PCCRLVQNAGEFVVTFPRAYHSGFSHGFN GEAANIATPEWLRVA+DAAIRRASINYPPMVSHFQLLYDLALELC+ Sbjct: 103 GFCPRKPRPVQKPVWQSGENYTFQEFEAKAKSFEKSYFKKCPKKTAFSPLEVETLYWKATVDKPFSVEYANDMPGSAFSV----KKMSGGKEIIEGVTVGETEWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHLGAGKTWYGVPKEAAVAFEEVVRDHGYGGEINPLVTFSVLGEKTTVMSPEVFVTAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALELCT 388
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: D7LRW6_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906087 PE=4 SV=1) HSP 1 Score: 494.197 bits (1271), Expect = 1.362e-160 Identity = 238/290 (82.07%), Postives = 261/290 (90.00%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPVQ+PVWQSGE+Y+F EFEAKAK+FE+NYLKK KK LSALE+ETL+W+ATVDKP VEYANDMPGSAF+PL+ ++ G+G TVGET WNMRA+SRA+GSLL+FMKEEIPGVTSPMVYIAM+FSWFAWHVEDHDLHSLNYLHMGAGKTWYGVP+DAAVAFEEVVR+ GYGGE NPLVT STLGEKTTVMSPEVF+ AGIPCCRLVQN GEFVVTFPRAYHSGFSHGFN GEA+NIATPEWLRVA+DAAIRRA+INYPPMVSH QLLYD AL L S Sbjct: 104 GFCPRKQRPVQRPVWQSGEHYSFGEFEAKAKTFEKNYLKKCGKKSQLSALEIETLYWRATVDKPFSVEYANDMPGSAFIPLSLA-AARRREYGGDGGTVGETAWNMRAMSRAEGSLLKFMKEEIPGVTSPMVYIAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPKDAAVAFEEVVRVHGYGGELNPLVTISTLGEKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPRAYHSGFSHGFNCGEASNIATPEWLRVAKDAAIRRAAINYPPMVSHLQLLYDYALALGS 392
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: K4BK22_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc03g111590.2 PE=4 SV=1) HSP 1 Score: 490.345 bits (1261), Expect = 4.184e-160 Identity = 235/290 (81.03%), Postives = 258/290 (88.97%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPV+KPVWQSGE YT Q+F+ KAK+FE+NYL+K SK+ L+ LEVETL+WKATVDKP VEYANDMPGSAF P KK+S GE +T+ +T WNMR VSR+KGSLL+FMKEEIPGVTSPMVY+AM+FSWFAWHVEDHDLHSLNYLHMG+GKTWYGVPRDAAVAFEEV+R+ GY GE NPLVTF+TLGEKTTVMSPEV L AGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFN GEA+NIATPEWLRVA+DAAIRRASIN PPMVSHFQLLYDLAL LCS Sbjct: 91 GFCPRKHRPVKKPVWQSGETYTVQQFQVKAKAFEKNYLRKNSKRA-LTPLEVETLYWKATVDKPFSVEYANDMPGSAFAP---KKASLAAGGIGEVSTLADTEWNMRGVSRSKGSLLKFMKEEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGSGKTWYGVPRDAAVAFEEVIRVQGYAGETNPLVTFATLGEKTTVMSPEVLLSAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEASNIATPEWLRVAKDAAIRRASINCPPMVSHFQLLYDLALSLCS 376
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: V4M0K3_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10010068mg PE=4 SV=1) HSP 1 Score: 491.886 bits (1265), Expect = 7.446e-160 Identity = 234/290 (80.69%), Postives = 261/290 (90.00%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPVQ+PVWQSGE+Y+F EFE KAK+FE+NYL+K KK LSALE+ETL+W+ATVDKP VEYANDMPGSAF+PL+ ++ G+G TVGET WNMRA++RA+GSLL+FMKEEIPGVTSPMVYIAM+FSWFAWHVEDHDLHSLNYLHMGA KTWYGVP+DAAVAFEEVVR+ GYGGE NPLVTFSTLG+KTTVMSPEVF+ AGIPCCRLVQN GEFVVTFPRAYHSGFSHGFN GEA+NIATPEWLR+A+DAAIRRA+INYPPMVSH QLLYD AL LCS Sbjct: 103 GFCPRKQRPVQRPVWQSGEHYSFGEFEFKAKNFEKNYLRKCGKKSQLSALEIETLYWRATVDKPFSVEYANDMPGSAFIPLSLA-AARRRESGGDGGTVGETAWNMRAMARAEGSLLKFMKEEIPGVTSPMVYIAMMFSWFAWHVEDHDLHSLNYLHMGASKTWYGVPKDAAVAFEEVVRVHGYGGELNPLVTFSTLGDKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPRAYHSGFSHGFNCGEASNIATPEWLRIAKDAAIRRAAINYPPMVSHLQLLYDFALALCS 391
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: M1B7Y2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400015167 PE=4 SV=1) HSP 1 Score: 489.189 bits (1258), Expect = 1.156e-159 Identity = 234/290 (80.69%), Postives = 258/290 (88.97%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPV+KPVWQSGE YT Q+F+AKAK+FE+NYL+K SK+ L+ LEVETL+WKATVDKP VEYANDMPGSAF P KK+S GE +T+ +T WNMR VSR+KGSLL+FMKEEIPGVTSPMVY+AM+FSWFAWHVEDHDLHSLNYLHMG+GKTWYGVPRDAAVAFEEV+R+ GY GE NPLVTF+TLGEKTTVMSPEV L AGIPCCRLVQNAGEFVVTFP+AYHSGFSHGFN GEA+NIATPEWLRVA+DAAIRRAS N PPMVSHFQLLYDLAL LCS Sbjct: 91 GFCPRKHRPVKKPVWQSGETYTVQQFQAKAKAFEKNYLRKNSKRA-LTPLEVETLYWKATVDKPFSVEYANDMPGSAFAP---KKASLAAGGIGEVSTLADTEWNMRGVSRSKGSLLKFMKEEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGSGKTWYGVPRDAAVAFEEVIRVQGYAGETNPLVTFATLGEKTTVMSPEVLLSAGIPCCRLVQNAGEFVVTFPQAYHSGFSHGFNCGEASNIATPEWLRVAKDAAIRRASTNCPPMVSHFQLLYDLALSLCS 376
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5C_PIG (Lysine-specific demethylase 5C OS=Sus scrofa GN=KDM5C PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.114e-38 Identity = 95/275 (34.55%), Postives = 136/275 (49.45%), Query Frame = 2 Query: 47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST---LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLA 856 Q+ YT Q F A SF+ +Y +E E FW+ ++++ VEY D+ F P S E WN+ + + S+L + +I G+ P +Y+ M+FS F WH+EDH +S+NYLH G KTWYGVP AA EEV++ + P + S L + T+M+P + G+P R Q AGEFV+TFPRAYHSGF+ G+NF EA N T +WL R + + SH +L+ +A Sbjct: 346 QATREYTLQSFGEMADSFKADYSNMPVHMVPTELVEKE--FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSG-WNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA 611
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: JMJ16_ARATH (Putative lysine-specific demethylase JMJ16 OS=Arabidopsis thaliana GN=JMJ16 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.991e-38 Identity = 112/294 (38.10%), Postives = 146/294 (49.66%), Query Frame = 2 Query: 44 WQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLS-------------ALE-VETLFWKATVDKPAM---VEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRL---DGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALEL 865 ++ G +T ++F+ A F+ Y KK S+ T ALE VE +W+ VDK V Y D+ F PK SS + E WN+ R GSLL++ +I GV P +YI M FS F WHVEDH L+SLNY+H GA K WYGV AV EE +R D + E P L + T +SP AG+P R VQ+AGEFV+TFPRAYH+GF+ GFN EA N+A +WL + A +SH +LL A E+ Sbjct: 264 FEPGPGFTLKDFQKYADEFKAQYFKK-SETSTDDKCKVDNSIDCWEPALEDVEGEYWR-IVDKATEEIEVLYGADLETGVFGSGFPKISSSHNASSSEDKYAKSG-WNLNNFPRLPGSLLKYEGSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVGGKDAVKLEEAMRKHLPDLF--EEQP----DLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNSGFNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLLLGAAREV 548
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KD5BB_DANRE (Lysine-specific demethylase 5B-B OS=Danio rerio GN=kdm5bb PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 2.225e-37 Identity = 91/277 (32.85%), Postives = 139/277 (50.18%), Query Frame = 2 Query: 47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST---LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALE 862 Q+ YT + F A SF+ +Y +E E FW+ T+ + VEY D+ F P K + + WN+ ++ S+L + +I G+T P +Y+ M FS F WH+EDH +S+NYLH G KTWYG P AA E V++ + P + S L + T+M+P + G+P R Q AGEFV+TFPR+YHSGF+ GFNF EA N T +W+ + R ++ + SH +++ ++A++ Sbjct: 358 QAHRDYTLKAFGEMADSFKSDYFNMPVHMVPTELVEKE--FWRLVGTIQEDVTVEYGADIASKEFGSGFPIKGGRFKIAPHDEKYLQCG-WNLNNMAMMTPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQLEAVMK------KLAPELFDSQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFNQGFNFAEAVNFCTVDWMPLGRQCVDHYRQLHRYCVFSHDEMVCNMAMK 625
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5B_CHICK (Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.699e-37 Identity = 92/273 (33.70%), Postives = 137/273 (50.18%), Query Frame = 2 Query: 47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVR-LDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLA 856 Q+ YT + F A +F+ +Y +E E FW+ +T+++ VEY D+ F P + E + WN+ + + S+L + +I G+ P +Y+ M FS F WH+EDH +S+NYLH G KTWYG P AA E+V++ L E P L + T+M+P + G+P R Q AGEFV+TFPRAYHSGF+ GFNF EA N T +WL + R ++ + SH +++ +A Sbjct: 347 QAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKE--FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSG-WNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQP----DLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMA 612
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5B_MOUSE (Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.102e-36 Identity = 92/272 (33.82%), Postives = 134/272 (49.26%), Query Frame = 2 Query: 47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST---LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLY 847 Q+ YT + F A +F+ +Y +E E FW+ +T+++ VEY D+ F P + E + WN+ + + S+L + +I G+ P +Y+ M FS F WH+EDH +S+NYLH G KTWYGVP AA E V++ + P + S L + T+M+P + +P R Q AGEFV+TFPRAYHSGF+ GFNF EA N T +WL + R V H++LL+ Sbjct: 372 QAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKE--FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKISPEEEEYLDSG-WNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMK------KLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQC------------VEHYRLLH 622 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0014585 ID=g.arboreum_cottongen_reftransV1_0014585; Name=g.arboreum_cottongen_reftransV1_0014585; organism=Gossypium arboreum; type=contig; length=873bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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