g.arboreum_cottongen_reftransV1_0014585, g.arboreum_cottongen_reftransV1_0014585 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A067D210_CITSI (Uncharacterized protein (Fragment) OS=Citrus sinensis GN=CISIN_1g039624mg PE=4 SV=1) HSP 1 Score: 479.945 bits (1234), Expect = 2.349e-165 Identity = 230/291 (79.04%), Postives = 252/291 (86.60%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKY-SKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGEYYTFQEFE KAK+FE++YLKK +KK LSALE+E+L+WKA+VDKP VEYANDMPGSAFVP+ + + G PWNMR VSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWH EDHDLHSLNYLHMGA KTWYGVP +AA AFEEVVR+ GYG E NPLVTF+TLGEKTT++SPEVF+ AG+PCCRLVQNAGEFVVTFPRAYH GFSHGFN GEAANIATPEWL +A+DAAIRRASINYPPMVSHFQLLYDLA+ + S Sbjct: 98 GFCPRKPRPVQKPVWQSGEYYTFQEFETKAKNFEKSYLKKCGNKKAALSALEIESLYWKASVDKPFSVEYANDMPGSAFVPVRKIREAVGEGVTVGET-----PWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHAEDHDLHSLNYLHMGASKTWYGVPMEAANAFEEVVRVHGYGEEINPLVTFATLGEKTTMISPEVFVGAGVPCCRLVQNAGEFVVTFPRAYHMGFSHGFNCGEAANIATPEWLNIAKDAAIRRASINYPPMVSHFQLLYDLAIAMHS 383
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A087G846_ARAAL (Uncharacterized protein (Fragment) OS=Arabis alpina GN=AALP_AA8G196500 PE=4 SV=1) HSP 1 Score: 479.559 bits (1233), Expect = 5.470e-165 Identity = 229/290 (78.97%), Postives = 260/290 (89.66%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPVQ+PVWQSGE+Y+F EFE KAK+FE+NYLKK SKK LSALE+ETL+WKATVDKP VEYANDMPGSAF+PL+ ++ G+ TVGE+PWNMRA++RA+GSLL+FMKEEIPGVTSPMVY+AM+FSWFAWHVEDHDLHSLNYLHMGA KTWYGVP+DAAVAFEEVVR+ GYGGE NPLVT STLGEKTTVMSPEVF+ AGIPCCRLVQN G+FV+TFP+AYHSGFSHGFN GEA+NIATPEWLR+A+DAAIRRA+++YPPMVSH QLLYD AL L S Sbjct: 104 GFCPRKQRPVQRPVWQSGEHYSFGEFEYKAKTFEKNYLKKCSKKSQLSALEMETLYWKATVDKPFSVEYANDMPGSAFIPLS-LAAARRRESGGDVGTVGESPWNMRAMARAEGSLLKFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHMGASKTWYGVPKDAAVAFEEVVRVHGYGGELNPLVTISTLGEKTTVMSPEVFVKAGIPCCRLVQNPGDFVITFPKAYHSGFSHGFNCGEASNIATPEWLRMAKDAAIRRAAVSYPPMVSHLQLLYDFALALGS 392
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: B9I3K5_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0012s09390g PE=4 SV=2) HSP 1 Score: 508.449 bits (1308), Expect = 8.313e-164 Identity = 246/290 (84.83%), Postives = 263/290 (90.69%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGE YTFQEFE KAKSFE+NYLKK+SKKG LS LE+E L+WKAT+DKP VEYANDMPGSAF +P+K G G GEG VGET WNMR+VSRAKGSLLRFMKEEIPGVTSPMVYI M+FSWFAWHVEDHDLHSLNY+HMGAGKTWYGVPR+AAVAFEEVVR+ GYGGE NPLVTF+ LGEKTTVMSPEVF+ AG+PCCRLVQNAGEFVVTFPRAYHSGFSHGFN GEAANIATPEWL VA+DAAIRRASINYPPMVSHFQLLYDLALE C+ Sbjct: 102 GFCPRKPRPVQKPVWQSGETYTFQEFETKAKSFEKNYLKKFSKKGGLSPLEIENLYWKATLDKPFAVEYANDMPGSAF---SPRKKEGQGGVVGEGMYVGETEWNMRSVSRAKGSLLRFMKEEIPGVTSPMVYIGMIFSWFAWHVEDHDLHSLNYMHMGAGKTWYGVPREAAVAFEEVVRVHGYGGENNPLVTFAVLGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLTVAKDAAIRRASINYPPMVSHFQLLYDLALEFCT 388
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: B9IF38_POPTR (Uncharacterized protein OS=Populus trichocarpa GN=POPTR_0015s10040g PE=4 SV=2) HSP 1 Score: 506.523 bits (1303), Expect = 2.367e-163 Identity = 243/290 (83.79%), Postives = 264/290 (91.03%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGE YTFQEFE KA++FE+NYLKK+ KKG LS LE+ETL+WKAT+DKP VEYANDMPGSAF +P+K G G AGEG +VG+T WNMR VSRAKGSLLRFMKEEIPGVTSPMVY+ M+FSWFAWHVEDHDLHSLNY+HMGAGKTWYGVPR+AAVAFEEVVR+ GYGGE NPLVTF+ LGEKTTVMSPEVF+ AG+PCCRLVQNAGEFVVTFPRAYHSGFSHGFN GEAANIATPEWL VA+DAAIRRASINYPPMVSHFQLLYDLALE C+ Sbjct: 102 GFCPRKPRPVQKPVWQSGETYTFQEFETKARTFEKNYLKKFFKKGALSPLEIETLYWKATLDKPFSVEYANDMPGSAF---SPRKKEGQGGVAGEGMSVGDTEWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYVGMMFSWFAWHVEDHDLHSLNYMHMGAGKTWYGVPREAAVAFEEVVRVHGYGGEINPLVTFAVLGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLMVAKDAAIRRASINYPPMVSHFQLLYDLALEFCT 388
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A067KFE5_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_11361 PE=4 SV=1) HSP 1 Score: 509.99 bits (1312), Expect = 6.850e-163 Identity = 244/290 (84.14%), Postives = 258/290 (88.97%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGE YTFQEFE KAKSFE++YLKK SKKG LS LE+ETL+WKATVDKP VEYANDMPGSAF + KK+ G G E WNMR VSR+KGSLLRFMKEEIPGVTSPMVY+AMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPR+AAVAFEEVVR+ GYGGE NPLVTF LGEKTTVMSPEVF+ AG+PCCRLVQNAGEFVVTFPRAYHSGFSHGFN GEAANIATPEWLRVA+DAAIRRASINYPPMVSHFQLLYDLALELC+ Sbjct: 103 GFCPRKPRPVQKPVWQSGENYTFQEFETKAKSFEKSYLKKGSKKGALSPLEIETLYWKATVDKPFSVEYANDMPGSAF---SHKKTGGKELGEGVTVGETE--WNMRGVSRSKGSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPREAAVAFEEVVRVHGYGGETNPLVTFQVLGEKTTVMSPEVFISAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALELCT 387 HSP 2 Score: 64.3142 bits (155), Expect = 3.420e-8 Identity = 28/29 (96.55%), Postives = 29/29 (100.00%), Query Frame = 2 Query: 785 AAIRRASINYPPMVSHFQLLYDLALELCS 871 AAIRRASINYPPMVSHFQLLYDLALELC+ Sbjct: 620 AAIRRASINYPPMVSHFQLLYDLALELCT 648
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: B9RAP0_RICCO (Nucleic acid binding protein, putative OS=Ricinus communis GN=RCOM_1507500 PE=4 SV=1) HSP 1 Score: 501.13 bits (1289), Expect = 8.986e-161 Identity = 247/290 (85.17%), Postives = 260/290 (89.66%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGE YTFQEFEAKAKSFE++Y KK KK S LEVETL+WKATVDKP VEYANDMPGSAF K GG+E EG TVGET WNMR VSRAKGSLLRFMKEEIPGVTSPMVY+AM+FSWFAWHVEDHDLHSLNYLH+GAGKTWYGVP++AAVAFEEVVR GYGGE NPLVTFS LGEKTTVMSPEVF+ AG+PCCRLVQNAGEFVVTFPRAYHSGFSHGFN GEAANIATPEWLRVA+DAAIRRASINYPPMVSHFQLLYDLALELC+ Sbjct: 103 GFCPRKPRPVQKPVWQSGENYTFQEFEAKAKSFEKSYFKKCPKKTAFSPLEVETLYWKATVDKPFSVEYANDMPGSAFSV----KKMSGGKEIIEGVTVGETEWNMRGVSRAKGSLLRFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHLGAGKTWYGVPKEAAVAFEEVVRDHGYGGEINPLVTFSVLGEKTTVMSPEVFVTAGVPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALELCT 388
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: D7LRW6_ARALL (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_906087 PE=4 SV=1) HSP 1 Score: 494.197 bits (1271), Expect = 1.362e-160 Identity = 238/290 (82.07%), Postives = 261/290 (90.00%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPVQ+PVWQSGE+Y+F EFEAKAK+FE+NYLKK KK LSALE+ETL+W+ATVDKP VEYANDMPGSAF+PL+ ++ G+G TVGET WNMRA+SRA+GSLL+FMKEEIPGVTSPMVYIAM+FSWFAWHVEDHDLHSLNYLHMGAGKTWYGVP+DAAVAFEEVVR+ GYGGE NPLVT STLGEKTTVMSPEVF+ AGIPCCRLVQN GEFVVTFPRAYHSGFSHGFN GEA+NIATPEWLRVA+DAAIRRA+INYPPMVSH QLLYD AL L S Sbjct: 104 GFCPRKQRPVQRPVWQSGEHYSFGEFEAKAKTFEKNYLKKCGKKSQLSALEIETLYWRATVDKPFSVEYANDMPGSAFIPLSLA-AARRREYGGDGGTVGETAWNMRAMSRAEGSLLKFMKEEIPGVTSPMVYIAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPKDAAVAFEEVVRVHGYGGELNPLVTISTLGEKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPRAYHSGFSHGFNCGEASNIATPEWLRVAKDAAIRRAAINYPPMVSHLQLLYDYALALGS 392
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: K4BK22_SOLLC (Uncharacterized protein OS=Solanum lycopersicum GN=Solyc03g111590.2 PE=4 SV=1) HSP 1 Score: 490.345 bits (1261), Expect = 4.184e-160 Identity = 235/290 (81.03%), Postives = 258/290 (88.97%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPV+KPVWQSGE YT Q+F+ KAK+FE+NYL+K SK+ L+ LEVETL+WKATVDKP VEYANDMPGSAF P KK+S GE +T+ +T WNMR VSR+KGSLL+FMKEEIPGVTSPMVY+AM+FSWFAWHVEDHDLHSLNYLHMG+GKTWYGVPRDAAVAFEEV+R+ GY GE NPLVTF+TLGEKTTVMSPEV L AGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFN GEA+NIATPEWLRVA+DAAIRRASIN PPMVSHFQLLYDLAL LCS Sbjct: 91 GFCPRKHRPVKKPVWQSGETYTVQQFQVKAKAFEKNYLRKNSKRA-LTPLEVETLYWKATVDKPFSVEYANDMPGSAFAP---KKASLAAGGIGEVSTLADTEWNMRGVSRSKGSLLKFMKEEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGSGKTWYGVPRDAAVAFEEVIRVQGYAGETNPLVTFATLGEKTTVMSPEVLLSAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNCGEASNIATPEWLRVAKDAAIRRASINCPPMVSHFQLLYDLALSLCS 376
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: V4M0K3_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10010068mg PE=4 SV=1) HSP 1 Score: 491.886 bits (1265), Expect = 7.446e-160 Identity = 234/290 (80.69%), Postives = 261/290 (90.00%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPVQ+PVWQSGE+Y+F EFE KAK+FE+NYL+K KK LSALE+ETL+W+ATVDKP VEYANDMPGSAF+PL+ ++ G+G TVGET WNMRA++RA+GSLL+FMKEEIPGVTSPMVYIAM+FSWFAWHVEDHDLHSLNYLHMGA KTWYGVP+DAAVAFEEVVR+ GYGGE NPLVTFSTLG+KTTVMSPEVF+ AGIPCCRLVQN GEFVVTFPRAYHSGFSHGFN GEA+NIATPEWLR+A+DAAIRRA+INYPPMVSH QLLYD AL LCS Sbjct: 103 GFCPRKQRPVQRPVWQSGEHYSFGEFEFKAKNFEKNYLRKCGKKSQLSALEIETLYWRATVDKPFSVEYANDMPGSAFIPLSLA-AARRRESGGDGGTVGETAWNMRAMARAEGSLLKFMKEEIPGVTSPMVYIAMMFSWFAWHVEDHDLHSLNYLHMGASKTWYGVPKDAAVAFEEVVRVHGYGGELNPLVTFSTLGDKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPRAYHSGFSHGFNCGEASNIATPEWLRIAKDAAIRRAAINYPPMVSHLQLLYDFALALCS 391
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: M1B7Y2_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400015167 PE=4 SV=1) HSP 1 Score: 489.189 bits (1258), Expect = 1.156e-159 Identity = 234/290 (80.69%), Postives = 258/290 (88.97%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPV+KPVWQSGE YT Q+F+AKAK+FE+NYL+K SK+ L+ LEVETL+WKATVDKP VEYANDMPGSAF P KK+S GE +T+ +T WNMR VSR+KGSLL+FMKEEIPGVTSPMVY+AM+FSWFAWHVEDHDLHSLNYLHMG+GKTWYGVPRDAAVAFEEV+R+ GY GE NPLVTF+TLGEKTTVMSPEV L AGIPCCRLVQNAGEFVVTFP+AYHSGFSHGFN GEA+NIATPEWLRVA+DAAIRRAS N PPMVSHFQLLYDLAL LCS Sbjct: 91 GFCPRKHRPVKKPVWQSGETYTVQQFQAKAKAFEKNYLRKNSKRA-LTPLEVETLYWKATVDKPFSVEYANDMPGSAFAP---KKASLAAGGIGEVSTLADTEWNMRGVSRSKGSLLKFMKEEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGSGKTWYGVPRDAAVAFEEVIRVQGYAGETNPLVTFATLGEKTTVMSPEVLLSAGIPCCRLVQNAGEFVVTFPQAYHSGFSHGFNCGEASNIATPEWLRVAKDAAIRRASTNCPPMVSHFQLLYDLALSLCS 376
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: REF6_ARATH (Lysine-specific demethylase REF6 OS=Arabidopsis thaliana GN=REF6 PE=1 SV=1) HSP 1 Score: 484.182 bits (1245), Expect = 8.985e-159 Identity = 234/290 (80.69%), Postives = 258/290 (88.97%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPVQ+PVWQSGE Y+F EFE KAK+FE+NYLKK KK LSALE+ETL+W+ATVDKP VEYANDMPGSAF+PL+ ++ GEG TVGET WNMRA+SRA+GSLL+FMKEEIPGVTSPMVY+AM+FSWFAWHVEDHDLHSLNYLHMGAGKTWYGVP+DAA+AFEEVVR+ GYG E NPLVTFSTLGEKTTVMSPEVF+ AGIPCCRLVQN GEFVVTFP AYHSGFSHGFNFGEA+NIATPEWLR+A+DAAIRRA+INYPPMVSH QLLYD L L S Sbjct: 104 GFCPRKQRPVQRPVWQSGEEYSFGEFEFKAKNFEKNYLKKCGKKSQLSALEIETLYWRATVDKPFSVEYANDMPGSAFIPLSLA-AARRRESGGEGGTVGETAWNMRAMSRAEGSLLKFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPKDAALAFEEVVRVHGYGEELNPLVTFSTLGEKTTVMSPEVFVKAGIPCCRLVQNPGEFVVTFPGAYHSGFSHGFNFGEASNIATPEWLRMAKDAAIRRAAINYPPMVSHLQLLYDFVLALGS 392
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: JM705_ORYSJ (Lysine-specific demethylase JMJ705 OS=Oryza sativa subsp. japonica GN=JMJ705 PE=1 SV=1) HSP 1 Score: 396.741 bits (1018), Expect = 1.655e-126 Identity = 185/292 (63.36%), Postives = 226/292 (77.40%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLK--KYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXX--XXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALEL 865 G CPR+ RP KPVW+S YT +FE+KA + ++ L + L+ L+ E LFW+A+ D+P +VEY +DM GS F P + ++ A ET WNMR V+R+ GSLLRFM E++PGVT+PM+Y+ M+FSWFAWHVEDHDLHSLNY+H+GA KTWYGVPRDAA+AFE+VVR GYGGE NPL TF+TLG+KTTVMSPEV + +GIPCCRLVQNAGEFVVTFP +YH GFSHGFN GEA+NIATPEWLR+A++AAIRRASIN PPMVSH+QLLYDLAL + Sbjct: 97 GLCPRRTRPGLKPVWRSSHRYTLPQFESKAGATRKSLLAGLNFPASRQLTPLDHEVLFWRASADRPIVVEYGSDMSGSGFSPCAAQPQPPPQQQPTARAAAHLGETAWNMRGVARSPGSLLRFMPEDVPGVTTPMLYVGMMFSWFAWHVEDHDLHSLNYMHLGAAKTWYGVPRDAALAFEDVVREHGYGGEVNPLETFATLGQKTTVMSPEVLVESGIPCCRLVQNAGEFVVTFPGSYHCGFSHGFNCGEASNIATPEWLRIAKEAAIRRASINRPPMVSHYQLLYDLALSM 388
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: SE14_ORYSJ (Lysine-specific demethylase SE14 OS=Oryza sativa subsp. japonica GN=SE14 PE=3 SV=2) HSP 1 Score: 355.14 bits (910), Expect = 1.413e-110 Identity = 173/299 (57.86%), Postives = 215/299 (71.91%), Query Frame = 2 Query: 11 PRKPRP---VQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAF---VPLNPKKSSXXXXX------XXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 PR+ RP V K VWQSGE YT +FE+K+++F + +L + +AL VE+LFWKA+ D+P +EYAND+PGS F V L KK G + +PWN++A++RA GSL RFM +++PGVTSPMVYI MLFSWFAWHVEDHDLHSLN+LH GA KTWY VP D AV EEV+R+ GYGG + + + + LGEKTT+MSPEV + G+PCCRLVQ GEFVVTFPRAYH GFSHGFN GEAAN ATP+WL+ A++AA+RRA +NY PM+SH QLLY LA+ S Sbjct: 126 PRRGRPTPQVLKQVWQSGERYTLDQFESKSRAFSKTHLAGLHEP---TALAVESLFWKASADRPIYIEYANDVPGSGFAAPVQLQRKKKQKRETAPMDEWEKSSGWRLSNSPWNLQAIARAPGSLTRFMPDDVPGVTSPMVYIGMLFSWFAWHVEDHDLHSLNFLHTGAPKTWYAVPGDRAVELEEVIRVHGYGGNTDRIASLAVLGEKTTLMSPEVLIDNGVPCCRLVQYPGEFVVTFPRAYHVGFSHGFNCGEAANFATPQWLKFAKEAAVRRAVMNYLPMLSHQQLLYLLAVSFIS 421
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: ELF6_ARATH (Probable lysine-specific demethylase ELF6 OS=Arabidopsis thaliana GN=ELF6 PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.305e-83 Identity = 121/187 (64.71%), Postives = 151/187 (80.75%), Query Frame = 2 Query: 311 WNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 WN++ ++R+ GS+ RFM ++IPGVTSPMVYI MLFSWFAWHVEDH+LHS+NYLH G+ KTWY VP D A+ FEEV+R + YG + L + LGEKTT++SPE+ + +GIPCCRLVQN GEFVVTFPR+YH GFSHGFN GEAAN TP+WL VA++AA+RRA++NY PM+SH QLLY L + S Sbjct: 265 WNLQMIARSPGSVTRFMPDDIPGVTSPMVYIGMLFSWFAWHVEDHELHSMNYLHTGSPKTWYAVPCDYALDFEEVIRKNSYGRNIDQLAALTQLGEKTTLVSPEMIVASGIPCCRLVQNPGEFVVTFPRSYHVGFSHGFNCGEAANFGTPQWLNVAKEAAVRRAAMNYLPMLSHQQLLYLLTMSFVS 451 HSP 2 Score: 70.8626 bits (172), Expect = 2.589e-12 Identity = 34/67 (50.75%), Postives = 46/67 (68.66%), Query Frame = 2 Query: 35 KPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAF 235 K VWQSG YT +FEAK+K+F + L + L+ + +E LFWKA ++KP +EYAND+PGSAF Sbjct: 120 KQVWQSGGVYTLDQFEAKSKAFYKTQLGTVKE---LAPVVIEALFWKAALEKPIYIEYANDVPGSAF 183
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: JM706_ORYSJ (Lysine-specific demethylase JMJ706 OS=Oryza sativa subsp. japonica GN=JMJ706 PE=2 SV=1) HSP 1 Score: 204.527 bits (519), Expect = 2.675e-58 Identity = 119/279 (42.65%), Postives = 156/279 (55.91%), Query Frame = 2 Query: 44 WQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATV-DKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEF----NPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALEL 865 + S YTF+++E A + KKYS L A VE FW+ K VEYA D+ GSAF + +G++ WN++ SR S+LR ++ IPGVT PM+YI MLFS FAWHVEDH L+S+NY H GA KTWYG+P DAA FE+V Y + F L KTT+ P V L +P + VQ GEFV+TFPR+YH+GFSHGFN GEA N A +W + A+ R A +N P+++H +LL A+ L Sbjct: 179 FMSERKYTFRDYEKMANKV---FAKKYSSASCLPAKYVEEEFWREIAFGKMDFVEYACDVDGSAF-------------SSSPHDQLGKSNWNLKNFSRLSNSVLRLLQTPIPGVTDPMLYIGMLFSMFAWHVEDHYLYSINYHHCGAFKTWYGIPGDAAPGFEKVASQFVYNKDILVGEGEDAAFDVLLGKTTMFPPNVLLDHNVPVYKAVQKPGEFVITFPRSYHAGFSHGFNCGEAVNFAISDWFPLGSVASRRYALLNRTPLLAHEELLCRSAVLL 441
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: JMJ15_ARATH (Lysine-specific demethylase JMJ15 OS=Arabidopsis thaliana GN=JMJ15 PE=2 SV=1) HSP 1 Score: 165.236 bits (417), Expect = 2.712e-44 Identity = 102/281 (36.30%), Postives = 144/281 (51.25%), Query Frame = 2 Query: 44 WQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVE--YANDMP----GSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVR--LDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALE 862 ++SG +T ++FE A+ F+ +Y ++ G S E+E +W+ + V+ Y D+ GS F K + + WN+ ++R +GSLL F EI GV P +Y+ M FS F WHVED+ L+SLNY H G K WYGVP A E+ +R L E L L E T SP + + G+P R VQNAGE+V+TFPRAYHSGF+ GFN EA N+A +WL ++A + +SH ++L A E Sbjct: 177 FESGPEFTLEKFEKYAQDFKDSYFERKDNVGDPSVEEIEGEYWRIIEKETNEVKVLYGTDLENPILGSGF-----SKGVKIPTRRNDMDKYISSGWNLNNLARLQGSLLSFEDCEISGVQVPWLYVGMCFSTFCWHVEDNHLYSLNYHHFGEPKVWYGVPGSHATGLEKAMRKHLPDLFDEQPDL-----LHELVTQFSPTILKNEGVPVYRAVQNAGEYVLTFPRAYHSGFNCGFNCAEAVNVAPVDWLAHGQNAVEIYSQETRKTSLSHDKILLGAAFE 447
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5A_MOUSE (Lysine-specific demethylase 5A OS=Mus musculus GN=Kdm5a PE=1 SV=2) HSP 1 Score: 164.081 bits (414), Expect = 3.767e-43 Identity = 99/275 (36.00%), Postives = 141/275 (51.27%), Query Frame = 2 Query: 47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST---LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLA 856 Q+ YT Q F A +F+ +Y +E E FW+ +++++ +VEY D+ F PKK E WN+ + + S+L + +I G+ P +Y+ M FS F WH+EDH +S+NYLH G KTWYGVP AA EEV+R E P + S L + T+M+P V + G+P R Q AGEFVVTFPRAYHSGF+ G+NF EA N T +WL + R + + SH +L++ +A Sbjct: 356 QAVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKE--FWRLVSSIEEDVIVEYGADISSKDFGSGFPKKDGQRKMLPEEEEYALSG-WNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMR------ELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMA 621
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: JMJ2_SCHPO (Jumonji/ARID domain-containing protein 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=jmj2 PE=3 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 1.426e-42 Identity = 93/287 (32.40%), Postives = 144/287 (50.17%), Query Frame = 2 Query: 44 WQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAM--VEYANDMP----GSAF-----VPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEV---VRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLR--VARDAAIRRASINYPPMVSHFQLLYDLA 856 +++G YYT FE +F++NY K+ K ++ VE +WK D VEY D+ GSAF P+NP WN+ ++ GSLL ++ + G+T P +Y+ M FS F WHVED+ +S+NY H G K WYG+P D A FE + D + + L +T+ ++P+ G+ + Q EFV+TFP+++H+G +HGFN EA N A +WL + + ++ S+ PP++SH L+Y+LA Sbjct: 344 FETGNYYTLSNFEKYCDNFKKNYFSKF-KDSEITEDIVEKEYWKLVKDNNTSLEVEYGADLSTLDQGSAFPSLAKNPVNPYSKDT---------------WNLNVIASTNGSLLSYIDNPVSGITCPWLYVGMCFSTFCWHVEDNYTYSVNYQHYGDTKLWYGIPGDQAERFERAALDIAPDLVKKQKDLLYQLATM------INPDELQKRGVDVYFIDQGPNEFVITFPKSFHAGINHGFNINEAVNFAPKDWLLNGFSLNGVLKYQSLLKPPVLSHDMLVYNLA 608
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5A_HUMAN (Lysine-specific demethylase 5A OS=Homo sapiens GN=KDM5A PE=1 SV=3) HSP 1 Score: 160.999 bits (406), Expect = 4.374e-42 Identity = 98/275 (35.64%), Postives = 140/275 (50.91%), Query Frame = 2 Query: 47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST---LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLA 856 Q+ YT Q F A +F+ +Y +E E FW+ +++++ +VEY D+ F P K E WN+ + + S+L + +I G+ P +Y+ M FS F WH+EDH +S+NYLH G KTWYGVP AA EEV+R E P + S L + T+M+P V + G+P R Q AGEFVVTFPRAYHSGF+ G+NF EA N T +WL + R + + SH +L++ +A Sbjct: 356 QAVREYTLQSFGEMADNFKSDYFNMPVHMVPTELVEKE--FWRLVSSIEEDVIVEYGADISSKDFGSGFPVKDGRRKILPEEEEYALSG-WNLNNMPVLEQSVLAHINVDISGMKVPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPSHAAEQLEEVMR------ELAPELFESQPDLLHQLVTIMNPNVLMEHGVPVYRTNQCAGEFVVTFPRAYHSGFNQGYNFAEAVNFCTADWLPIGRQCVNHYRRLRRHCVFSHEELIFKMA 621
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5_DROME (Lysine-specific demethylase lid OS=Drosophila melanogaster GN=lid PE=1 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 1.179e-41 Identity = 98/282 (34.75%), Postives = 151/282 (53.55%), Query Frame = 2 Query: 47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMP----GSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST----LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALE 862 Q+ YT Q+F A F++ Y +K +E E FW+ +++D+ VEY D+ GS F P KSS + WN+ + + S+L + +I G+ +P +Y+ M F+ F WH EDH +S+NYLH G KTWYGVP A FEE ++ + P + FS+ L + T+M+P + ++ +P R Q+AGEFV+TFPRAYH+GF+ G+NF EA N A +WL++ R+ + + + SH +L+ +ALE Sbjct: 511 QAEREYTLQQFGQMADQFKQEYFRKPVHLVPTEMVERE--FWRIVSSIDEDVTVEYGADLHTMDHGSGF----PTKSSLYLLPGDQEYAESS--WNLNNLPLLEDSILGHINADISGMNAPWMYVGMCFAAFCWHNEDHWSYSINYLHWGEPKTWYGVPGSCAEQFEETMK------QAAPEL-FSSQPDLLHQLVTIMNPNILMNNRVPVFRTDQHAGEFVITFPRAYHAGFNQGYNFAEAVNFAPADWLKMGRECVNHYSMLRRFCVFSHDELVCKMALE 777 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0014585 ID=g.arboreum_cottongen_reftransV1_0014585; Name=g.arboreum_cottongen_reftransV1_0014585; organism=Gossypium arboreum; type=contig; length=873bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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