g.arboreum_cottongen_reftransV1_0014585, g.arboreum_cottongen_reftransV1_0014585 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A0B0MHK5_GOSAR (Lysine-specific demethylase REF6-like protein OS=Gossypium arboreum GN=F383_11209 PE=4 SV=1) HSP 1 Score: 586.26 bits (1510), Expect = 0.000e+0 Identity = 290/290 (100.00%), Postives = 290/290 (100.00%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSGGGREAGEGATVGETPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS Sbjct: 103 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSGGGREAGEGATVGETPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 392
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A0D2LVF4_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_001G061900 PE=4 SV=1) HSP 1 Score: 585.489 bits (1508), Expect = 0.000e+0 Identity = 289/290 (99.66%), Postives = 289/290 (99.66%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSGGGREAGEG TVGETPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS Sbjct: 103 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSGGGREAGEGVTVGETPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 392
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A061FZ67_THECC (Relative of early flowering 6, putative isoform 3 OS=Theobroma cacao GN=TCM_014549 PE=4 SV=1) HSP 1 Score: 564.688 bits (1454), Expect = 0.000e+0 Identity = 278/290 (95.86%), Postives = 285/290 (98.28%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAK+FER YLK+YS+KG+LSALEVETLFWKATVDKP VEYANDMPGSAFVPL+ KKSSGGGREAGEG TVGETPWNMRAVSRAKGSLLRFMK+EIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVF+HAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS Sbjct: 102 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKNFERGYLKRYSRKGSLSALEVETLFWKATVDKPFSVEYANDMPGSAFVPLSSKKSSGGGREAGEGVTVGETPWNMRAVSRAKGSLLRFMKDEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFVHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 391
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A061FYM0_THECC (Relative of early flowering 6, putative isoform 1 OS=Theobroma cacao GN=TCM_014549 PE=4 SV=1) HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0 Identity = 278/290 (95.86%), Postives = 285/290 (98.28%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAK+FER YLK+YS+KG+LSALEVETLFWKATVDKP VEYANDMPGSAFVPL+ KKSSGGGREAGEG TVGETPWNMRAVSRAKGSLLRFMK+EIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVF+HAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS Sbjct: 102 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKNFERGYLKRYSRKGSLSALEVETLFWKATVDKPFSVEYANDMPGSAFVPLSSKKSSGGGREAGEGVTVGETPWNMRAVSRAKGSLLRFMKDEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFVHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 391
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A061FZP0_THECC (Relative of early flowering 6, putative isoform 2 OS=Theobroma cacao GN=TCM_014549 PE=4 SV=1) HSP 1 Score: 564.303 bits (1453), Expect = 0.000e+0 Identity = 278/290 (95.86%), Postives = 285/290 (98.28%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAK+FER YLK+YS+KG+LSALEVETLFWKATVDKP VEYANDMPGSAFVPL+ KKSSGGGREAGEG TVGETPWNMRAVSRAKGSLLRFMK+EIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVF+HAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS Sbjct: 102 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKNFERGYLKRYSRKGSLSALEVETLFWKATVDKPFSVEYANDMPGSAFVPLSSKKSSGGGREAGEGVTVGETPWNMRAVSRAKGSLLRFMKDEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFVHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 391
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A0B0P356_GOSAR (Lysine-specific demethylase REF6-like protein OS=Gossypium arboreum GN=F383_05499 PE=4 SV=1) HSP 1 Score: 548.125 bits (1411), Expect = 3.259e-179 Identity = 268/290 (92.41%), Postives = 277/290 (95.52%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPV K VWQSGEYYTFQEFEAKAK+FERNYLKKYSKKG+LSALE+ETLFWKATVD+P +EYANDMPGSAF L+ KKSSGGGRE GEG TV ETPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVR+DGY GEFNPLVTFSTLGEKTTVMSPEVF+HAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFN GEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLAL+LCS Sbjct: 102 GFCPRKQRPVLKSVWQSGEYYTFQEFEAKAKNFERNYLKKYSKKGSLSALEIETLFWKATVDQPFDIEYANDMPGSAFAALSSKKSSGGGRETGEGVTVAETPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVDGYAGEFNPLVTFSTLGEKTTVMSPEVFVHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNLGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALDLCS 391
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: A0A0D2S311_GOSRA (Uncharacterized protein OS=Gossypium raimondii GN=B456_006G270100 PE=4 SV=1) HSP 1 Score: 544.273 bits (1401), Expect = 1.198e-177 Identity = 266/290 (91.72%), Postives = 274/290 (94.48%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPV K VWQSGEYYTFQEFEAKAK FERNYLKKYSKK +LSALE+ETLFWKATVD+P +EYANDMPGSAF L KKSSGGGRE GEG TV ETPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVR+DGY GEFNPLVTFSTLGEKTTVMSPEVF+HAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFN GEAANIATPEWLRVARDA+IRRASINYPPMVSHFQLLYDLAL+LCS Sbjct: 102 GFCPRKQRPVLKSVWQSGEYYTFQEFEAKAKIFERNYLKKYSKKASLSALEIETLFWKATVDQPFDIEYANDMPGSAFAALGSKKSSGGGRETGEGVTVAETPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRVDGYAGEFNPLVTFSTLGEKTTVMSPEVFVHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNLGEAANIATPEWLRVARDASIRRASINYPPMVSHFQLLYDLALDLCS 391
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: F6GTM2_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_17s0000g09980 PE=4 SV=1) HSP 1 Score: 508.449 bits (1308), Expect = 3.456e-167 Identity = 252/290 (86.90%), Postives = 268/290 (92.41%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPV+KPVWQSGEYYTFQEFEAKA++FE+NYLKK SKK LSALE+ETLFWKA+VDKP VEYANDMPGSAFVP++ KK REAGE TVGET WNMR +SRAKGSLLRFMKEEIPGVTSPMVY+AM+FSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPR+AAVAFEEVVR+ GYGGE NPLVTF+ LGEKTTVMSPEVF+ AGIPCCRLVQN GEFVVTFPRAYHSGFSHGFN GEAANIATPEWLRVA+DAAIRRASINYPPMVSHFQLLYDLAL LCS Sbjct: 99 GFCPRKPRPVKKPVWQSGEYYTFQEFEAKARAFEKNYLKKSSKK-PLSALEIETLFWKASVDKPFSVEYANDMPGSAFVPVSSKK----WREAGEAVTVGETAWNMRGISRAKGSLLRFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPREAAVAFEEVVRVHGYGGEINPLVTFAVLGEKTTVMSPEVFVSAGIPCCRLVQNPGEFVVTFPRAYHSGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALCS 383
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: W9S5V7_9ROSA (Lysine-specific demethylase REF6 OS=Morus notabilis GN=L484_008190 PE=4 SV=1) HSP 1 Score: 512.301 bits (1318), Expect = 1.770e-166 Identity = 242/290 (83.45%), Postives = 261/290 (90.00%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRKPRPVQ+PVWQSGE YTFQ+FEAKAK FER++ K+ +KKG LS LE+ETL+WKATVDKP VEYANDMPGSAFVP++ K+S G A G T WNMRAVSRAKGSLLRFMKEEIPGVTSPMVY+AM+FSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPR+AAVAFEEVVR+ GYGGE NPLVTFS LGEKTTVMSPEVF+ AG+PCCRLVQN GEFVVTFPRAYH+GFSHGFN GEAANIATPEWLRVA+DAAIRRASINYPPMVSHFQLLYDLAL LCS Sbjct: 103 GFCPRKPRPVQRPVWQSGENYTFQQFEAKAKGFERSFFKRCAKKGALSPLEIETLYWKATVDKPFSVEYANDMPGSAFVPVSAKRSREAGESATLGETA----WNMRAVSRAKGSLLRFMKEEIPGVTSPMVYVAMMFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPREAAVAFEEVVRVHGYGGEINPLVTFSILGEKTTVMSPEVFVRAGVPCCRLVQNPGEFVVTFPRAYHTGFSHGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALCS 388
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Match: M1B7Y3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400015167 PE=4 SV=1) HSP 1 Score: 485.723 bits (1249), Expect = 1.318e-165 Identity = 234/290 (80.69%), Postives = 258/290 (88.97%), Query Frame = 2 Query: 2 GFCPRKPRPVQKPVWQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWKATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALELCS 871 GFCPRK RPV+KPVWQSGE YT Q+F+AKAK+FE+NYL+K SK+ L+ LEVETL+WKATVDKP VEYANDMPGSAF P KK+S GE +T+ +T WNMR VSR+KGSLL+FMKEEIPGVTSPMVY+AM+FSWFAWHVEDHDLHSLNYLHMG+GKTWYGVPRDAAVAFEEV+R+ GY GE NPLVTF+TLGEKTTVMSPEV L AGIPCCRLVQNAGEFVVTFP+AYHSGFSHGFN GEA+NIATPEWLRVA+DAAIRRAS N PPMVSHFQLLYDLAL LCS Sbjct: 91 GFCPRKHRPVKKPVWQSGETYTVQQFQAKAKAFEKNYLRKNSKRA-LTPLEVETLYWKATVDKPFSVEYANDMPGSAFAP---KKASLAAGGIGEVSTLADTEWNMRGVSRSKGSLLKFMKEEIPGVTSPMVYLAMMFSWFAWHVEDHDLHSLNYLHMGSGKTWYGVPRDAAVAFEEVIRVQGYAGETNPLVTFATLGEKTTVMSPEVLLSAGIPCCRLVQNAGEFVVTFPQAYHSGFSHGFNCGEASNIATPEWLRVAKDAAIRRASTNCPPMVSHFQLLYDLALSLCS 376
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5C_PIG (Lysine-specific demethylase 5C OS=Sus scrofa GN=KDM5C PE=2 SV=1) HSP 1 Score: 150.599 bits (379), Expect = 1.114e-38 Identity = 95/275 (34.55%), Postives = 136/275 (49.45%), Query Frame = 2 Query: 47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST---LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLA 856 Q+ YT Q F A SF+ +Y +E E FW+ ++++ VEY D+ F P S E WN+ + + S+L + +I G+ P +Y+ M+FS F WH+EDH +S+NYLH G KTWYGVP AA EEV++ + P + S L + T+M+P + G+P R Q AGEFV+TFPRAYHSGF+ G+NF EA N T +WL R + + SH +L+ +A Sbjct: 346 QATREYTLQSFGEMADSFKADYSNMPVHMVPTELVEKE--FWRLVNSIEEDVTVEYGADIHSKEFGSGFPVSDSKRHLTPEEEEYATSG-WNLNVMPVLEQSVLCHINADISGMKVPWLYVGMVFSAFCWHIEDHWSYSINYLHWGEPKTWYGVPSLAAEHLEEVMK------KLTPELFDSQPDLLHQLVTLMNPNTLMSHGVPVVRTNQCAGEFVITFPRAYHSGFNQGYNFAEAVNFCTADWLPAGRQCIEHYRRLRRYCVFSHEELICKMA 611
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: JMJ16_ARATH (Putative lysine-specific demethylase JMJ16 OS=Arabidopsis thaliana GN=JMJ16 PE=2 SV=1) HSP 1 Score: 148.673 bits (374), Expect = 4.991e-38 Identity = 112/294 (38.10%), Postives = 146/294 (49.66%), Query Frame = 2 Query: 44 WQSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLS-------------ALE-VETLFWKATVDKPAM---VEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRL---DGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALEL 865 ++ G +T ++F+ A F+ Y KK S+ T ALE VE +W+ VDK V Y D+ F PK SS + E WN+ R GSLL++ +I GV P +YI M FS F WHVEDH L+SLNY+H GA K WYGV AV EE +R D + E P L + T +SP AG+P R VQ+AGEFV+TFPRAYH+GF+ GFN EA N+A +WL + A +SH +LL A E+ Sbjct: 264 FEPGPGFTLKDFQKYADEFKAQYFKK-SETSTDDKCKVDNSIDCWEPALEDVEGEYWR-IVDKATEEIEVLYGADLETGVFGSGFPKISSSHNASSSEDKYAKSG-WNLNNFPRLPGSLLKYEGSDISGVLVPWLYIGMCFSSFCWHVEDHHLYSLNYMHWGAPKLWYGVGGKDAVKLEEAMRKHLPDLF--EEQP----DLLHKLVTQLSPSKLKTAGVPVHRCVQHAGEFVLTFPRAYHAGFNSGFNCAEAVNVAPVDWLPHGQIAIELYCQQGRKTSISHDKLLLGAAREV 548
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KD5BB_DANRE (Lysine-specific demethylase 5B-B OS=Danio rerio GN=kdm5bb PE=2 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 2.225e-37 Identity = 91/277 (32.85%), Postives = 139/277 (50.18%), Query Frame = 2 Query: 47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST---LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLALE 862 Q+ YT + F A SF+ +Y +E E FW+ T+ + VEY D+ F P K + + WN+ ++ S+L + +I G+T P +Y+ M FS F WH+EDH +S+NYLH G KTWYG P AA E V++ + P + S L + T+M+P + G+P R Q AGEFV+TFPR+YHSGF+ GFNF EA N T +W+ + R ++ + SH +++ ++A++ Sbjct: 358 QAHRDYTLKAFGEMADSFKSDYFNMPVHMVPTELVEKE--FWRLVGTIQEDVTVEYGADIASKEFGSGFPIKGGRFKIAPHDEKYLQCG-WNLNNMAMMTPSVLTHVTADICGMTLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGFAAEQLEAVMK------KLAPELFDSQPDLLHQLVTIMNPNTLMAHGVPIYRTNQCAGEFVITFPRSYHSGFNQGFNFAEAVNFCTVDWMPLGRQCVDHYRQLHRYCVFSHDEMVCNMAMK 625
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5B_CHICK (Lysine-specific demethylase 5B OS=Gallus gallus GN=KDM5B PE=2 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 4.699e-37 Identity = 92/273 (33.70%), Postives = 137/273 (50.18%), Query Frame = 2 Query: 47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVR-LDGYGGEFNPLVTFSTLGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLYDLA 856 Q+ YT + F A +F+ +Y +E E FW+ +T+++ VEY D+ F P + E + WN+ + + S+L + +I G+ P +Y+ M FS F WH+EDH +S+NYLH G KTWYG P AA E+V++ L E P L + T+M+P + G+P R Q AGEFV+TFPRAYHSGF+ GFNF EA N T +WL + R ++ + SH +++ +A Sbjct: 347 QAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKE--FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKFKVRPEEEEYLDSG-WNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGAPGYAAEQLEDVMKKLAPELFESQP----DLLHQLVTIMNPNTLMAHGVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQCIEHYRLLSRYCVFSHDEMICKMA 612
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Match: KDM5B_MOUSE (Lysine-specific demethylase 5B OS=Mus musculus GN=Kdm5b PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 1.102e-36 Identity = 92/272 (33.82%), Postives = 134/272 (49.26%), Query Frame = 2 Query: 47 QSGEYYTFQEFEAKAKSFERNYLKKYSKKGTLSALEVETLFWK--ATVDKPAMVEYANDMPGSAFVPLNPKKSSXXXXXXXXXXXXXXXPWNMRAVSRAKGSLLRFMKEEIPGVTSPMVYIAMLFSWFAWHVEDHDLHSLNYLHMGAGKTWYGVPRDAAVAFEEVVRLDGYGGEFNPLVTFST---LGEKTTVMSPEVFLHAGIPCCRLVQNAGEFVVTFPRAYHSGFSHGFNFGEAANIATPEWLRVARDAAIRRASINYPPMVSHFQLLY 847 Q+ YT + F A +F+ +Y +E E FW+ +T+++ VEY D+ F P + E + WN+ + + S+L + +I G+ P +Y+ M FS F WH+EDH +S+NYLH G KTWYGVP AA E V++ + P + S L + T+M+P + +P R Q AGEFV+TFPRAYHSGF+ GFNF EA N T +WL + R V H++LL+ Sbjct: 372 QAARDYTLRTFGEMADAFKSDYFNMPVHMVPTELVEKE--FWRLVSTIEEDVTVEYGADIASKEFGSGFPVRDGKIKISPEEEEYLDSG-WNLNNMPVMEQSVLAHITADICGMKLPWLYVGMCFSSFCWHIEDHWSYSINYLHWGEPKTWYGVPGYAAEQLENVMK------KLAPELFVSQPDLLHQLVTIMNPNTLMTHEVPVYRTNQCAGEFVITFPRAYHSGFNQGFNFAEAVNFCTVDWLPLGRQC------------VEHYRLLH 622 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0014585 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
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InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0014585 ID=g.arboreum_cottongen_reftransV1_0014585; Name=g.arboreum_cottongen_reftransV1_0014585; organism=Gossypium arboreum; type=contig; length=873bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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