g.arboreum_cottongen_reftransV1_0015169, g.arboreum_cottongen_reftransV1_0015169 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0015169 vs. ExPASy TrEMBL
Match: A0A067ESE2_CITSI (Uncharacterized protein OS=Citrus sinensis GN=CISIN_1g006724mg PE=4 SV=1) HSP 1 Score: 289.656 bits (740), Expect = 7.187e-89 Identity = 136/172 (79.07%), Postives = 150/172 (87.21%), Query Frame = -3 Query: 391 STTPVYIVAGEIYGSNSMATLRADYPNIFSHSTLATEEELELVKSYQNRLAALDYIVAFESDVFVYTYDGNMAKATQGHRRFEGFRKTINPNRQNFVKLIDQLDAGVISWEEFSLEVKSLHFDRLGAPYLRQPGESPRLEENFYANPLPGCICKRSQEKQTSSLKLERTLSS 906 STT +YIVAGEIYGS+SMA R ++PN+FSHSTLATEEELE K YQNRLAALDY+VA ESDVFV+TYDGNMAKA QGHRRFEGFRK+INP++QN V+LIDQLD G ISWEEFS EVKSLH DRLG PYLRQPGESPRLEENFYANP PGCIC RSQE+ + LKL+ LSS Sbjct: 457 STTTIYIVAGEIYGSSSMAAFREEFPNVFSHSTLATEEELEPFKPYQNRLAALDYLVALESDVFVHTYDGNMAKAVQGHRRFEGFRKSINPDKQNIVRLIDQLDEGAISWEEFSSEVKSLHSDRLGGPYLRQPGESPRLEENFYANPFPGCICDRSQER-VAGLKLDERLSS 627
BLAST of g.arboreum_cottongen_reftransV1_0015169 vs. ExPASy TrEMBL
Match: F6HKX9_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VIT_08s0007g01650 PE=4 SV=1) HSP 1 Score: 286.189 bits (731), Expect = 1.063e-87 Identity = 134/166 (80.72%), Postives = 147/166 (88.55%), Query Frame = -3 Query: 409 STTPVYIVAGEIYGSNSMATLRADYPNIFSHSTLATEEELELVKSYQNRLAALDYIVAFESDVFVYTYDGNMAKATQGHRRFEGFRKTINPNRQNFVKLIDQLDAGVISWEEFSLEVKSLHFDRLGAPYLRQPGESPRLEENFYANPLPGCICKRSQEKQTSSLKL 906 STT +YIVAGEIYG NSMA R++YPN+F+H+TLATEEELE K YQNRLAALDYI+A ESDVFVYTYDGNMAKA QGHRRFEGFRKTINP+RQNFV+LIDQLD G ISWE FS EVKSLH +RLGAPYLRQ GESPRLEENF+ANP PGC+C +SQE Q SSLKL Sbjct: 444 STTTIYIVAGEIYGRNSMAAFRSEYPNVFTHNTLATEEELEPFKPYQNRLAALDYILALESDVFVYTYDGNMAKAVQGHRRFEGFRKTINPDRQNFVRLIDQLDGGAISWEMFSQEVKSLHTNRLGAPYLRQAGESPRLEENFFANPFPGCVCNKSQE-QISSLKL 608
BLAST of g.arboreum_cottongen_reftransV1_0015169 vs. ExPASy TrEMBL
Match: A0A067JWW8_JATCU (Uncharacterized protein OS=Jatropha curcas GN=JCGZ_25069 PE=4 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 2.574e-85 Identity = 134/180 (74.44%), Postives = 152/180 (84.44%), Query Frame = -3 Query: 382 STTPVYIVAGEIYGSNSMATLRADYPNIFSHSTLATEEELELVKSYQNRLAALDYIVAFESDVFVYTYDGNMAKATQGHRRFEGFRKTINPNRQNFVKLIDQLDAGVISWEEFSLEVKSLHFDRLGAPYLRQPGESPRLEENFYANPLPGCICKRSQEKQTSSLKLERTL-----SSVQR 906 S+T +YIVAG+IYGSNS+A RA++PN+F HSTLAT EELE K+YQNRLAALDYIVA ESDVFVYTYDGNMAKA QGHRRFEGFRKTINP+RQNFVKLID+ D G ISWEEFS VKSLH +RLGAPYLRQ GESPRLEENFYANP PGC+C RSQE ++LK E+ + S++QR Sbjct: 452 SSTTIYIVAGKIYGSNSLAAFRAEFPNVFCHSTLATAEELEPFKAYQNRLAALDYIVALESDVFVYTYDGNMAKAVQGHRRFEGFRKTINPDRQNFVKLIDEFDEGAISWEEFSSTVKSLHSNRLGAPYLRQAGESPRLEENFYANPFPGCVCNRSQE-NLNTLKFEQWVKPSLGSALQR 630
BLAST of g.arboreum_cottongen_reftransV1_0015169 vs. ExPASy TrEMBL
Match: M5WNE8_PRUPE (Uncharacterized protein OS=Prunus persica GN=PRUPE_ppa002471mg PE=4 SV=1) HSP 1 Score: 281.182 bits (718), Expect = 2.590e-85 Identity = 134/178 (75.28%), Postives = 151/178 (84.83%), Query Frame = -3 Query: 379 STTPVYIVAGEIYGSNSMATLRADYPNIFSHSTLATEEELELVKSYQNRLAALDYIVAFESDVFVYTYDGNMAKATQGHRRFEGFRKTINPNRQNFVKLIDQLDAGVISWEEFSLEVKSLHFDRLGAPYLRQPGESPRLEENFYANPLPGCICKRSQEKQTSSLKLE--RTLSSVQRR 906 STT +YIVAGEIYG NSMA R++YPN+FSHSTLATE+ELE K YQNRLAALDYIVA ESDVFVYTYDGNMAKA QGHRRFEGF K+INP+RQNFVKL+DQLD G + WE FSLEVKSLH DRLGAPY+RQ GESPRLEENFYANP PGCIC +S+E Q + KL+ R++S +R Sbjct: 493 STTTIYIVAGEIYGGNSMAAFRSEYPNVFSHSTLATEQELEPFKPYQNRLAALDYIVALESDVFVYTYDGNMAKAVQGHRRFEGFSKSINPDRQNFVKLVDQLDKGAVLWETFSLEVKSLHSDRLGAPYVRQVGESPRLEENFYANPFPGCICNKSEE-QIARQKLDERRSISVSSQR 669
BLAST of g.arboreum_cottongen_reftransV1_0015169 vs. ExPASy TrEMBL
Match: A0A059D766_EUCGR (Uncharacterized protein OS=Eucalyptus grandis GN=EUGRSUZ_B02760 PE=4 SV=1) HSP 1 Score: 280.026 bits (715), Expect = 5.600e-85 Identity = 129/162 (79.63%), Postives = 144/162 (88.89%), Query Frame = -3 Query: 421 STTPVYIVAGEIYGSNSMATLRADYPNIFSHSTLATEEELELVKSYQNRLAALDYIVAFESDVFVYTYDGNMAKATQGHRRFEGFRKTINPNRQNFVKLIDQLDAGVISWEEFSLEVKSLHFDRLGAPYLRQPGESPRLEENFYANPLPGCICKRSQEKQTS 906 STT +YIVAGEIYGSNSM R++YPN+FSHSTLATEEELE K YQNRLAALDYIVA ESDVFVYTYDGNMAKA QGHRRFEGFRKTINP+RQN+VKL+DQL+ G ISW++FSLEVK LH DR+GAPYLRQ GESPR+EENFYANPLPGC+C + QE+ S Sbjct: 492 STTTIYIVAGEIYGSNSMDDFRSEYPNVFSHSTLATEEELEPFKLYQNRLAALDYIVALESDVFVYTYDGNMAKAVQGHRRFEGFRKTINPDRQNYVKLVDQLERGDISWDDFSLEVKRLHSDRVGAPYLRQAGESPRIEENFYANPLPGCMCNKLQEQMRS 653
BLAST of g.arboreum_cottongen_reftransV1_0015169 vs. ExPASy TrEMBL
Match: W9RPL5_9ROSA (Uncharacterized protein OS=Morus notabilis GN=L484_023625 PE=4 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 2.617e-84 Identity = 128/162 (79.01%), Postives = 142/162 (87.65%), Query Frame = -3 Query: 421 STTPVYIVAGEIYGSNSMATLRADYPNIFSHSTLATEEELELVKSYQNRLAALDYIVAFESDVFVYTYDGNMAKATQGHRRFEGFRKTINPNRQNFVKLIDQLDAGVISWEEFSLEVKSLHFDRLGAPYLRQPGESPRLEENFYANPLPGCICKRSQEKQTS 906 STT +YIVAGEIYGSNSMA RA+YPN+FSHSTLATEEEL + YQNRLAALDY +A +SDVFVYTYDGNMAKA QGHRRF+GF+KTINP+RQNFVKLIDQLD ISWEEFSLEVKS+H DRLGAPYLR+PG+SP+LEENFYANPLPGCIC KQ + Sbjct: 458 STTTIYIVAGEIYGSNSMAAFRAEYPNVFSHSTLATEEELAPFEPYQNRLAALDYFLALDSDVFVYTYDGNMAKAVQGHRRFDGFKKTINPDRQNFVKLIDQLDEHAISWEEFSLEVKSVHSDRLGAPYLREPGDSPKLEENFYANPLPGCICAMGLSKQIA 619
BLAST of g.arboreum_cottongen_reftransV1_0015169 vs. ExPASy TrEMBL
Match: B9SPF7_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0085720 PE=4 SV=1) HSP 1 Score: 276.559 bits (706), Expect = 3.830e-84 Identity = 127/170 (74.71%), Postives = 148/170 (87.06%), Query Frame = -3 Query: 397 STTPVYIVAGEIYGSNSMATLRADYPNIFSHSTLATEEELELVKSYQNRLAALDYIVAFESDVFVYTYDGNMAKATQGHRRFEGFRKTINPNRQNFVKLIDQLDAGVISWEEFSLEVKSLHFDRLGAPYLRQPGESPRLEENFYANPLPGCICKRSQEKQTSSLKLERTL 906 STT +YIVAGEIYGSNSMA RA++PN+F+HSTLAT EELEL K YQNRLAALDYI A ESDVFVYTYDGNMAKA QGHRRFEGFRKTINP+R++FV LIDQ D GV+SWEEFS +VKS H +RLG+PY RQ GESPR EENFYANP PGC+C +SQ+ Q++SLK+++ + Sbjct: 440 STTTIYIVAGEIYGSNSMAAFRAEFPNVFTHSTLATAEELELFKQYQNRLAALDYIAALESDVFVYTYDGNMAKAVQGHRRFEGFRKTINPDRKSFVTLIDQFDEGVLSWEEFSSKVKSSHSNRLGSPYFRQVGESPRTEENFYANPFPGCVCSKSQQ-QSNSLKVDQMV 608
BLAST of g.arboreum_cottongen_reftransV1_0015169 vs. ExPASy TrEMBL
Match: G7JS84_MEDTR (GDP-fucose O-fucosyltransferase-like protein OS=Medicago truncatula GN=MTR_4g019210 PE=4 SV=2) HSP 1 Score: 275.018 bits (702), Expect = 2.533e-83 Identity = 127/162 (78.40%), Postives = 140/162 (86.42%), Query Frame = -3 Query: 421 STTPVYIVAGEIYGSNSMATLRADYPNIFSHSTLATEEELELVKSYQNRLAALDYIVAFESDVFVYTYDGNMAKATQGHRRFEGFRKTINPNRQNFVKLIDQLDAGVISWEEFSLEVKSLHFDRLGAPYLRQPGESPRLEENFYANPLPGCICKRSQEKQTS 906 +TT +YIVAG IYG NSMA RA+YPN+F+HSTLATEEELE K YQNRLAALDYIVA ESDVFVYTYDGNMAKA QGHRRFEGFRKTINP+R NFV+LID LD G +SWE FSLEVK+LH +RLGAPYLRQ GESPR EENF+ANP PGC+C +SQE TS Sbjct: 469 ATTTIYIVAGPIYGGNSMAAFRAEYPNVFTHSTLATEEELEPFKPYQNRLAALDYIVALESDVFVYTYDGNMAKAVQGHRRFEGFRKTINPDRSNFVRLIDHLDEGSLSWENFSLEVKNLHSNRLGAPYLRQVGESPRTEENFFANPFPGCVCNKSQELITS 630
BLAST of g.arboreum_cottongen_reftransV1_0015169 vs. ExPASy TrEMBL
Match: M1BTB3_SOLTU (Uncharacterized protein OS=Solanum tuberosum GN=PGSC0003DMG400020335 PE=4 SV=1) HSP 1 Score: 262.307 bits (669), Expect = 4.867e-83 Identity = 120/161 (74.53%), Postives = 139/161 (86.34%), Query Frame = -3 Query: 424 STTPVYIVAGEIYGSNSMATLRADYPNIFSHSTLATEEELELVKSYQNRLAALDYIVAFESDVFVYTYDGNMAKATQGHRRFEGFRKTINPNRQNFVKLIDQLDAGVISWEEFSLEVKSLHFDRLGAPYLRQPGESPRLEENFYANPLPGCICKRSQEKQT 906 STT +YIVAGEIYG+NSM R+ YPN++SHSTLAT EELE K+YQNRLAA+DY+VA ESDVF YTYDGNMAKA QGHRRFEGFRKTI+P+R NFV+LID LD G +SWEEF+ +VK+L +RLGAPYLRQ GESPRLEENFYANPLPGC+C RS E+ + Sbjct: 63 STTRIYIVAGEIYGNNSMDEFRSHYPNVYSHSTLATNEELEAFKNYQNRLAAVDYMVALESDVFAYTYDGNMAKAVQGHRRFEGFRKTISPDRFNFVRLIDSLDKGEVSWEEFASKVKALQSNRLGAPYLRQAGESPRLEENFYANPLPGCLCNRSHEEAS 223
BLAST of g.arboreum_cottongen_reftransV1_0015169 vs. ExPASy TrEMBL
Match: K7KDI6_SOYBN (Uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.335e-81 Identity = 124/162 (76.54%), Postives = 139/162 (85.80%), Query Frame = -3 Query: 421 STTPVYIVAGEIYGSNSMATLRADYPNIFSHSTLATEEELELVKSYQNRLAALDYIVAFESDVFVYTYDGNMAKATQGHRRFEGFRKTINPNRQNFVKLIDQLDAGVISWEEFSLEVKSLHFDRLGAPYLRQPGESPRLEENFYANPLPGCICKRSQEKQTS 906 STT +YIVAG IYG NS+ ++ +P +FSHSTLATEEELE K YQNRLAALDYIVA ESDVFVYTYDGNMAKA QGHRRFEGF+KTINP+R NFVKLIDQLD G ISWE F+ EVK+LH +RLGAPYLRQ GESPR+EENFYANP PGC+C +SQE+ TS Sbjct: 316 STTTIYIVAGPIYGGNSLEAFQSVFPKVFSHSTLATEEELEPFKPYQNRLAALDYIVALESDVFVYTYDGNMAKAVQGHRRFEGFQKTINPDRLNFVKLIDQLDEGAISWEAFASEVKNLHSNRLGAPYLRQVGESPRMEENFYANPFPGCVCNKSQEQITS 477
BLAST of g.arboreum_cottongen_reftransV1_0015169 vs. ExPASy Swiss-Prot
Match: Y1491_ARATH (Uncharacterized protein At1g04910 OS=Arabidopsis thaliana GN=At1g04910 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 3.478e-15 Identity = 54/165 (32.73%), Postives = 87/165 (52.73%), Query Frame = -3 Query: 424 STTPVYIVAGEIYGSNS-MATLRADYPNIFSHSTLATEEELELVKSYQNRL-AALDYIVAFESDVFVYTYDG--NMAKATQGHRRFEGFRKTINPNRQNFVKLIDQLDAGVISWEEFSLEVKSLHFDRLGAPYLRQPGESPRLEENFYANPLPGCICKRSQEKQT 906 ++T +Y+ AGE++G M R +P + +HS++ EEL + Q + +A+DY+V SD+F+ TYDG N A GHR + GFR TI P+R+ + + G + E ++ L + G P+ R SP E+FY N P C C+ + +K + Sbjct: 327 NSTRIYLAAGELFGGEQFMKPFRTLFPRLDNHSSVDPSEELS--ATSQGLIGSAVDYMVCLLSDIFMPTYDGPSNFANNLLGHRLYYGFRTTIRPDRKALAPIFIAREKGKRAGFEEAVRRVMLKTN-FGGPHKRV---SP---ESFYTNSWPECFCQMNPKKSS 482 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0015169 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
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BLAST of g.arboreum_cottongen_reftransV1_0015169 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0015169 ID=g.arboreum_cottongen_reftransV1_0015169; Name=g.arboreum_cottongen_reftransV1_0015169; organism=Gossypium arboreum; type=contig; length=908bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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