g.arboreum_cottongen_reftransV1_0017722, g.arboreum_cottongen_reftransV1_0017722 (contig) Gossypium arboreum
Overview
Alignments
The following features are aligned
Analyses
This contig is derived from or has results from the following analyses
Homology
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A072V293_MEDTR (Acyl-CoA-binding domain protein OS=Medicago truncatula GN=MTR_3g491870 PE=4 SV=1) HSP 1 Score: 405.601 bits (1041), Expect = 7.668e-133 Identity = 239/359 (66.57%), Postives = 282/359 (78.55%), Query Frame = 3 Query: 228 DWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSN-VQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAM-GKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGKVE 1298 DWQ LLQSIF+GLIFSYLLAKLIS+VVSF ++NL+ITR + N V ++ S+P H +++SV+AE GSIR ES GD DDD WEGVE TELD+AFSAATAFVAAAAADRLSQKV N+VQLQLYGLYKIATEGPC+ QPS LKMTARAKWQAW KLGAMPPEDAMQKYID+V+ELYP+W G+ + K G S + +GPMGPVFSSFVYEEE +D KMDAIH FAREGD+ NLLK IESGVSV+L+DSEGRTP+HWAVDRGHL + E L+ RNA+VNAKDN+GQTPLHYAV CERE IA++LVK +AD ++DNDG+S D+C S WP++Q +V+ Sbjct: 6 DWQSLLQSIFIGLIFSYLLAKLISIVVSFNNENLTITRNTNPNAVVSHDDTKQDDVVSDP----GHRPEAEAESVMAEQGSIRNESVDGGDDDYDDD---WEGVESTELDEAFSAATAFVAAAAADRLSQKVSNDVQLQLYGLYKIATEGPCSTAQPSPLKMTARAKWQAWQKLGAMPPEDAMQKYIDIVSELYPTWLDGAPLRSKTGDGGGPSSEARGPMGPVFSSFVYEEECGSDSKMDAIHGFAREGDMTNLLKCIESGVSVNLKDSEGRTPLHWAVDRGHLNVTELLVGRNADVNAKDNDGQTPLHYAVTCEREAIAEYLVKHSADIHSEDNDGSSSRDICSSKWPFMQHEEEVK 357
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: V4KYU6_EUTSA (Uncharacterized protein OS=Eutrema salsugineum GN=EUTSA_v10014004mg PE=4 SV=1) HSP 1 Score: 404.06 bits (1037), Expect = 2.053e-132 Identity = 228/355 (64.23%), Postives = 283/355 (79.72%), Query Frame = 3 Query: 222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQG-YEKIDDS-GSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQ 1280 M DW QL QS+ LGLIF+YLLAKLIS++V+FKD+NLS+TR + + Y K++ S G G E +DS+VAE GS+R + D D D DDD WEGVE TELD+AFSAATAFVAAAA+DRLSQKV N++QLQLYG YKIATEGPCTAPQPSALKMTARAKWQAW KLGAMPPE+AM+KYID+VT+LYP+W G + G+ + +AS + + MGPVFSS VYEEESEN+LK+DA+H FAREG+++NLLK IE+G+ V+ +DSEGRTP+HWA+DRGHL +A+AL+ + A+VNAKDNEGQT LHYAVMCERE +A+FLV+Q AD KD DGNSP+DLC+S W +++ Sbjct: 1 MGDWYQLAQSVILGLIFAYLLAKLISILVAFKDENLSLTRNHETQSENDYRKVESSTGIGGE------------TDSLVAEQGSLRGDEDDDDDDEDDD----WEGVESTELDEAFSAATAFVAAAASDRLSQKVSNDLQLQLYGFYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIDLVTQLYPAWVEGGSKGRNRSGDASGSNSRAAMGPVFSSLVYEEESENELKIDAVHAFAREGEVENLLKCIENGIPVNARDSEGRTPLHWAIDRGHLNVAKALVDKKADVNAKDNEGQTSLHYAVMCEREALAEFLVEQKADTTIKDEDGNSPLDLCESEWSFMR 339
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: A0A0D3AMG1_BRAOL (Uncharacterized protein OS=Brassica oleracea var. oleracea PE=4 SV=1) HSP 1 Score: 403.29 bits (1035), Expect = 3.237e-132 Identity = 224/354 (63.28%), Postives = 275/354 (77.68%), Query Frame = 3 Query: 228 DWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITR---ARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQ 1280 DW QL QS+ GLIF+YLLAKLIS++V+FKDDNLS+TR A S + Y K+D S ++DS+VAE GS+R + D D D WEGVE TELD+AFSAATAFVAAAA+DRLSQKV NE+QLQLYG YKIATEG CTAPQPSALKMTARAKWQAW K+GAMP E+AM+KYID+VT LYP+W G + G+ +A+ + + PMGPVFSS VYEEES+N+LK+DA+H FAREG+++NLLK IESG+ V+ +DSEGRTP+HWA+DRGHL +A+AL+ +NA+VNAKDNEGQT LHYAV+CERE +A+FLVKQ AD KD DGNSP+DLC+S W W++ Sbjct: 4 DWFQLAQSLIFGLIFAYLLAKLISILVAFKDDNLSLTRSHDAAQSENEYYRKVDSSAG--------------ETDSLVAEQGSLRGDEDDDDD---------WEGVESTELDEAFSAATAFVAAAASDRLSQKVSNELQLQLYGFYKIATEGACTAPQPSALKMTARAKWQAWQKMGAMPAEEAMEKYIDLVTHLYPAWVEGGSKGRNRTGDAAGSNSRAPMGPVFSSLVYEEESDNELKIDAVHAFAREGEVENLLKCIESGIPVNARDSEGRTPLHWAIDRGHLNVAKALVDKNADVNAKDNEGQTALHYAVVCEREALAEFLVKQKADTSIKDEDGNSPLDLCESEWSWMR 334
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: I3SFA2_MEDTR (Uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 402.519 bits (1033), Expect = 9.682e-132 Identity = 237/359 (66.02%), Postives = 282/359 (78.55%), Query Frame = 3 Query: 228 DWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSN-VQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAM-GKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGKVE 1298 DWQ LLQSIF+GLIFSYLLAKLIS+VVSF ++NL+ITR + N V ++ S+P H +++SV+AE GSIR+ES GD DDD WEGVE TELD+AFSAATAFVAAAAADRLSQKV N+VQLQLYGLYKIATEGPC+ QPS LKMTARAKWQAW KLGAMPPEDAMQKYID+V+ELYP+W G+ + K G S + +GPMGPVFSSFVYEEE +D KMDAIH FAREGD+ NLLK IESGVSV+L+DSEGRTP+HWAVDRGHL + E L+ +NA+VNAKDN+GQTPLHYAV CERE IA++LVK +AD ++DNDG+S D+C WP++Q +V+ Sbjct: 6 DWQSLLQSIFIGLIFSYLLAKLISIVVSFNNENLTITRNTNPNAVVSHDDTKQDDVVSDP----GHRPEAEAESVMAEQGSIRSESVDGGDDDYDDD---WEGVESTELDEAFSAATAFVAAAAADRLSQKVSNDVQLQLYGLYKIATEGPCSTAQPSPLKMTARAKWQAWRKLGAMPPEDAMQKYIDIVSELYPTWLDGAPLRSKTGDGGGPSSEARGPMGPVFSSFVYEEECGSDSKMDAIHGFAREGDMTNLLKCIESGVSVNLKDSEGRTPLHWAVDRGHLNVTELLVGKNADVNAKDNDGQTPLHYAVTCEREAIAEYLVKHSADIHSEDNDGSSSRDICSFKWPFMQHEEEVK 357
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Match: R0GMU2_9BRAS (Uncharacterized protein OS=Capsella rubella GN=CARUB_v10026721mg PE=4 SV=1) HSP 1 Score: 401.749 bits (1031), Expect = 1.590e-131 Identity = 231/352 (65.62%), Postives = 280/352 (79.55%), Query Frame = 3 Query: 222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWL 1277 M DW Q QS+ LGLIF+YLLAKLIS++V+FKD+NLS+TR S+ + YE + S + G TE S+VAE GS+R E D D +DDDD WEGVE TELD+AFSAATAFVAAAA+DRLSQKV NE QLQLYGLYKIATEGPCTAPQPSA+KMTARAKWQAW KLGAMPPE+AM+KYID+VT+LYP+W + G + D GPMGPVFSS VYEEESEN+LK+DAIH FAREG+++NLLK +E+G+ V+ +DSEGRTP+HWA+DRGH+ +A+AL+ +NA+VNAKDNEGQT LHYAV+CERE IA++LVKQ AD KD+DGNSP+DLC+S WPW+ Sbjct: 1 MGDWYQFAQSVILGLIFAYLLAKLISILVAFKDENLSLTRDHSTESE-YENLRKVESSTGIGGETE--------SLVAEQGSLRGEEDDDESDDEDDDD--WEGVESTELDEAFSAATAFVAAAASDRLSQKVSNEFQLQLYGLYKIATEGPCTAPQPSAIKMTARAKWQAWQKLGAMPPEEAMEKYIDLVTQLYPAW-----VDAGSKKKNRTGDAPGPMGPVFSSLVYEEESENELKIDAIHAFAREGEVENLLKCLENGIPVNARDSEGRTPLHWAIDRGHMNVAKALIDQNADVNAKDNEGQTSLHYAVVCEREAIAEYLVKQKADTTIKDDDGNSPLDLCESEWPWM 336
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBP2_ARATH (Acyl-CoA-binding domain-containing protein 2 OS=Arabidopsis thaliana GN=ACBP2 PE=1 SV=1) HSP 1 Score: 409.068 bits (1050), Expect = 2.828e-136 Identity = 233/358 (65.08%), Postives = 286/358 (79.89%), Query Frame = 3 Query: 222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWA-AGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQRAGK 1292 M DW QL QS+ LGLIFSYLLAKLIS+VV+FK+DNLS+TR + +I G S + S+ ++DS+VAE GS R++S D +DDD + GVE TELD+AFSAAT FV AAADRLSQKVP++VQ QLYGLYKIATEGPCTAPQPSALKMTARAKWQAW KLGAMPPE+AM+KYI++VT+LYP+W G G G D+A+S + +G MGPVFSS VY+EESEN+LK+DAIH FAREG+++NLLKSIESG+ V+ +DSEGRTP+HWA+DRGHL IA+ L+ +NA+VNAKDNEGQTPLHYAV+C+RE IA+FLVKQNA+ KD DGNSP+DLC+S WPW++ + K Sbjct: 1 MGDWAQLAQSVILGLIFSYLLAKLISIVVTFKEDNLSLTRHPE---ESQLEIKPEGVDSRRLDSSCGGFGGEADSLVAEQGSSRSDSVAGDDSEEDDDWE---GVESTELDEAFSAATLFVTTAAADRLSQKVPSDVQQQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIEIVTQLYPTWLDGGVKAGSRGGDDAAS-NSRGTMGPVFSSLVYDEESENELKIDAIHGFAREGEVENLLKSIESGIPVNARDSEGRTPLHWAIDRGHLNIAKVLVDKNADVNAKDNEGQTPLHYAVVCDREAIAEFLVKQNANTAAKDEDGNSPLDLCESDWPWIRDSAK 351
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBP1_ARATH (Acyl-CoA-binding domain-containing protein 1 OS=Arabidopsis thaliana GN=ACBP1 PE=1 SV=2) HSP 1 Score: 399.438 bits (1025), Expect = 1.096e-132 Identity = 225/353 (63.74%), Postives = 275/353 (77.90%), Query Frame = 3 Query: 222 MADWQQLLQSIFLGLIFSYLLAKLISLVVSFKDDNLSITRARSSNVQGYEKIDDSGSGSEPIGSTEHLGLHKSDSVVAELGSIRAESXXXXXXXXXXXXXXWEGVECTELDDXXXXXXXXXXXXXXDRLSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDSGWPWLQ 1280 MADW QL QSI GLIF+YLLAKLIS++++FKD+NLS+TR ++ + YE + + + G T DS++AE GS+R + D D + GVE TELD+AFSAATAFVAAAA+DRLSQKV NE+QLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAW KLGAMPPE+AM+KYID+VT+LYP+W G G S + GPMGPVFSS VYEEES+N+LK+DAIH FAREG+++NLLK IE+G+ V+ +DSEGRTP+HWA+DRGHL +AEAL+ +NA+VNAKDNEGQT LHYAV+CERE +A+FLVKQ AD KD DGNSP+DLC+S W W++ Sbjct: 1 MADWYQLAQSIIFGLIFAYLLAKLISILLAFKDENLSLTRNHTTQSE-YENLRKVETLTGISGET--------DSLIAEQGSLRGDEDESDDDDWE-------GVESTELDEAFSAATAFVAAAASDRLSQKVSNELQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWQKLGAMPPEEAMEKYIDLVTQLYPAWVEG-----GSKRRNRSGEAAGPMGPVFSSLVYEEESDNELKIDAIHAFAREGEVENLLKCIENGIPVNARDSEGRTPLHWAIDRGHLNVAEALVDKNADVNAKDNEGQTSLHYAVVCEREALAEFLVKQKADTTIKDEDGNSPLDLCESEWSWMR 332
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_BOVIN (Acyl-CoA-binding domain-containing protein 6 OS=Bos taurus GN=ACBD6 PE=2 SV=1) HSP 1 Score: 147.517 bits (371), Expect = 1.821e-38 Identity = 83/217 (38.25%), Postives = 113/217 (52.07%), Query Frame = 3 Query: 606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIES-GVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDL 1253 L Q E L LY YK G C P+PS + KW+AW LG P AMQ+YI VV +L PSW S KG N GP+ E + D I + RE ++D++ K I++ + V+++D EGRT +HWA DRGH ++ LL A++N +DNEGQT LHYA CE DI + L++ AD +D DG P ++ Sbjct: 56 LVQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVVKKLDPSWNPQSPEKKGKEANTG---FGGPVVSSLYHEEIIREEDKD-----IFDYCRENNIDHITKVIKTKNMDVNMKDEEGRTLLHWACDRGHKELVTVLLQYRADINCQDNEGQTALHYAAACEFLDIVELLLQSGADPTLRDQDGCLPEEV 264
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_HUMAN (Acyl-CoA-binding domain-containing protein 6 OS=Homo sapiens GN=ACBD6 PE=1 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.155e-37 Identity = 91/229 (39.74%), Postives = 121/229 (52.84%), Query Frame = 3 Query: 606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIES-GVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDL--CDSGWPWLQR 1283 L Q E L LY YK G C P+PS + KW+AW LG P AMQ+YI VV +L P W KG N G GPV SS +EE + K I + RE ++D++ K+I+S V V+++D EGR +HWA DRGH ++ LL A++N +DNEGQT LHYA CE DI + L++ AD +D DG P ++ C + LQR Sbjct: 56 LIQVASREQLLYLYARYKQVKVGNCNTPKPSFFDFEGKQKWEAWKALGDSSPSQAMQEYIAVVKKLDPGWNPQIPEKKGKEANT------GFGGPVISSLYHEETIREEDK--NIFDYCRENNIDHITKAIKSKNVDVNVKDEEGRALLHWACDRGHKELVTVLLQHRADINCQDNEGQTALHYASACEFLDIVELLLQSGADPTLRDQDGCLPEEVTGCKTVSLVLQR 276
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_RAT (Acyl-CoA-binding domain-containing protein 6 OS=Rattus norvegicus GN=Acbd6 PE=2 SV=1) HSP 1 Score: 140.969 bits (354), Expect = 4.765e-36 Identity = 91/234 (38.89%), Postives = 124/234 (52.99%), Query Frame = 3 Query: 606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIES-GVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDL--CDSGWPWLQ--RAGK 1292 L Q E L LY YK G C P+P+ + KW+AW LG P AMQ+YI V +L P W + KG ++ G GPV SS +EE + K I + RE ++D++ K+I+S V V++ D EGR +HWA DRGH ++ + LL A +N +DNEGQT LHYA CE DI + L++ AD +D DG P ++ C + LQ RAGK Sbjct: 56 LVQVASREQLLYLYARYKQVKVGNCNIPKPNFFDFEGKQKWEAWKALGDSSPSQAMQEYIAAVKKLDPGWNPQVSEKKGKEGSS------GFGGPVVSSLYHEETIREEDK--NIFDYCRENNIDHITKAIKSKTVDVNMTDEEGRALLHWACDRGHKELVKVLLQCEAGINCQDNEGQTALHYAAACEFSDIVELLLQSGADPTLRDQDGCLPEEVTGCKAVSLVLQLHRAGK 281
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_MOUSE (Acyl-CoA-binding domain-containing protein 6 OS=Mus musculus GN=Acbd6 PE=2 SV=2) HSP 1 Score: 137.887 bits (346), Expect = 4.725e-35 Identity = 86/229 (37.55%), Postives = 121/229 (52.84%), Query Frame = 3 Query: 606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVS-VHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDL--CDSGWPWLQR 1283 L Q E L LY +K G C P+P+ + KW+AW LG P AMQ+YI V +L P W + KG ++ G GPV SS +EE + K I + RE ++D++ K+I+S + V++ D EGR +HWA DRGH ++ + LL A +N +DNEGQT LHYA CE DI + L++ AD +D DG P ++ C + LQR Sbjct: 56 LVQVASREQLLYLYARFKQVKVGNCNTPKPNFFDFEGKQKWEAWKALGDSSPSQAMQEYIAAVKKLDPGWNPQVSEKKGKEGSS------GFGGPVVSSLYHEETIREEDK--NIFDYCRENNIDHIAKAIKSKAADVNMTDEEGRALLHWACDRGHKELVKVLLQYEAGINCQDNEGQTALHYAAACEFLDIVELLLQSGADPTLRDQDGCLPEEVTGCKAVSLLLQR 276
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_DANRE (Acyl-CoA-binding domain-containing protein 6 OS=Danio rerio GN=acbd6 PE=2 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 8.090e-34 Identity = 81/220 (36.82%), Postives = 116/220 (52.73%), Query Frame = 3 Query: 606 LSQKVPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMGPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIES-GVSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDS 1262 L Q E L LY +K G C +P + KW AW +LG M E AMQ+Y+ V L P + S+ +GG G GP SS EE+ + K I + RE +++++ K+I S V V+ +D EGR +HWA DRGH + LL NA++N++D+EGQT LHYA CE +I + L+K AD KD +G+ P ++ +S Sbjct: 74 LVQTASREQLLYLYARFKQVKVGKCNTSKPGFFDFEGQRKWSAWKQLGDMSAEQAMQEYVTCVHALDPEGSQKSSERRGGEKRT------GFGGPAVSSLYQEEKIREEDKN--IFDYCRENNIEHVSKAISSKTVDVNTRDEEGRALLHWACDRGHKDLVSLLLQNNADINSQDDEGQTALHYASACEFAEIVELLLKAGADPSIKDQEGSLPEEVTES 285
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_XENTR (Acyl-CoA-binding domain-containing protein 6 OS=Xenopus tropicalis GN=acbd6 PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 2.731e-32 Identity = 77/211 (36.49%), Postives = 109/211 (51.66%), Query Frame = 3 Query: 636 LQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPMG-PXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESG-VSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDS 1262 L LY YK G C P+P + KW+AW LG + AM +YI+ V +L P W+ A K+ K G PV S +E+ + D I + RE ++ + ++ +G + V++ D EGR +HWA DRGH ++ LL NA++N +D+EGQTPLHYA CE DI L+ AD DNDG P ++ DS Sbjct: 56 LFLYARYKQVKVGRCNTPKPGFFDYEGKKKWEAWKALGDYSCQQAMNEYIETVKKLDPDWSPQ-------ALEEPHKEPKTTFGGPVVSCLYKVQETLREEDKD-IFDYCRENNISRVSHALSTGAIDVNVADDEGRCLLHWACDRGHTQLVSVLLFHNAHINMQDSEGQTPLHYASACEFPDIVDLLLDHGADPSLVDNDGFQPHEVTDS 258
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_XENLA (Acyl-CoA-binding domain-containing protein 6 OS=Xenopus laevis GN=acbd6 PE=2 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 7.224e-32 Identity = 77/214 (35.98%), Postives = 109/214 (50.93%), Query Frame = 3 Query: 636 LQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGADNASSKDVKGPM----GPXXXXXXXXXXXXNDLKMDAIHTFAREGDLDNLLKSIESG-VSVHLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNADKDTKDNDGNSPVDLCDS 1262 L LY YK G C P+P + KW+AW LG + AM +YI+ V +L P W+ A + K P GPV S +E+ + D I + RE + + ++ +G V V++ D EGR+ +HWA DRGH ++ +L NA++N +D+EGQTPLHYA CE DI L+ AD DNDG P ++ DS Sbjct: 56 LYLYARYKQVKVGRCNTPKPGFFDYEGKKKWEAWKALGDYSHQQAMTEYIETVKKLDPDWSP----------QALEEPYKEPKTTFGGPVVSCLYKVQETLREEDKD-IFDYCRENNHSRVSHALSTGSVDVNVADDEGRSLLHWACDRGHTQLVSVILFHNAHINMQDSEGQTPLHYASACEFPDIVDLLLDHGADPSLVDNDGFQPHEVTDS 258
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Match: ACBD6_DICDI (Acyl-CoA-binding domain-containing protein 6 homolog OS=Dictyostelium discoideum GN=acbd6 PE=3 SV=1) HSP 1 Score: 110.923 bits (276), Expect = 1.994e-25 Identity = 79/252 (31.35%), Postives = 120/252 (47.62%), Query Frame = 3 Query: 618 VPNEVQLQLYGLYKIATEGPCTAPQPSALKMTARAKWQAWHKLGAMPPEDAMQKYIDVVTELYPSWAAGSAMGKGGAD--------------------------NASSKDVKGP----MGPXXXXXX-----XXXXXXNDLKMDAIHTFAREGDLDNLLKSIESGVSV-HLQDSEGRTPMHWAVDRGHLKIAEALLSRNANVNAKDNEGQTPLHYAVMCEREDIAKFLVKQNA-DKDTKDNDGNSPVDLCDS 1262 + NE QL LY YK AT G C P ++KW +W+ L + AM YI +V L P W + + + + +++ P MGPV S F E+ E + K D + + D++ + K IE+ ++ + D +GRT + WA DRG+ +IA+ L+ +NVN +D EG TPLHYAV+C++ +I K L+ Q++ DK KDN + P D DS Sbjct: 27 IKNEEQLYLYCNYKQATIGDCNTKAPPFYDYIGKSKWNSWNSLKGVEKIVAMNSYISLVNALSPGWDSNIKVERATQSVFLNDEEFKELEKKEKEEKEELKKLEEENGGEIEKPKSKWMGPVLSKFSLVDDETLEKLEKNTKQD-LGYWVSVNDIERVKKEIENDKNIINEVDEDGRTALIWACDRGYFEIAKLLIENGSNVNVQDGEGMTPLHYAVVCDQFEICKLLLSQSSIDKSIKDNSDSIPSDFIDS 277 The following BLAST results are available for this feature:
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy TrEMBL
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs TrEMBL) Total hits: 25
Pages
BLAST of g.arboreum_cottongen_reftransV1_0017722 vs. ExPASy Swiss-Prot
Analysis Date: 2016-11-15 (Homology Analysis for Gossypium arboreum CottonGen RefTrans V1 vs SwissProt) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan analysis for Gossypium arboreum CottonGen RefTrans V1
Date Performed: 2016-11-14
Sequences
The
following sequences are available for this feature:
contig sequence >g.arboreum_cottongen_reftransV1_0017722 ID=g.arboreum_cottongen_reftransV1_0017722; Name=g.arboreum_cottongen_reftransV1_0017722; organism=Gossypium arboreum; type=contig; length=1847bpback to top Annotated Terms
The
following terms have been associated with
this contig:
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